RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 SELENOKQ9Y6D0 94 aa4.24□□□□□ -1.73
VPS33A-203ENST00000536212 A0A0J9YX75 114 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 A0A0J9YY99 117 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 K7EQG2 157 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 M0QY20 66 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 RS1O15537 224 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 MSMBP08118 114 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 GNLYP22749 145 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 PSMB8P28062 276 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 UBE2D3P61077 147 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 UBE2D2P62837 147 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 SBSPONQ8IVN8 264 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 ATP6V0E2Q8NHE4 81 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 AMELXQ99217 191 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 KIR2DL4Q99706 377 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 SPAG8Q99932 426 aaPredicted RBP4.23□□□□□ -1.73
VPS33A-203ENST00000536212 JPT2Q9H910 190 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 EDA2RQ9HAV5 297 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 TP53TG1Q9Y2A0 90 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 CELSR3Q9NYQ7 3312 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 COL6A3P12111 3177 aa4.23□□□□□ -1.73
VPS33A-203ENST00000536212 EP300Q09472 2414 aaPredicted RBP4.23□□□□□ -1.73
VPS33A-203ENST00000536212 WDR87Q6ZQQ6 2873 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 IGHV4-30-2A0A087WSY4 118 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 SDHAF1A6NFY7 115 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 A8MTW9 85 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 TMEM262E9PQX1 116 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 F5H768 121 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 H3BMG7 143 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 J3KT08 172 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 IGHV3-30P01768 117 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 IGHV3-30-5P0DP03 117 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 CFAP126Q5VTH2 177 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 AMTNQ6UX39 209 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 Q6YL49 198 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 SLC25A29Q8N8R3 303 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 ZNRF2Q8NHG8 242 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 LINC00476Q8WZB0 136 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 DLX4Q92988 240 aaPredicted RBP4.22□□□□□ -1.73
VPS33A-203ENST00000536212 CCL19Q99731 98 aa4.22□□□□□ -1.73
VPS33A-203ENST00000536212 CNOT1A5YKK6 2376 aaKnown RBP4.21□□□□□ -1.73
VPS33A-203ENST00000536212 PCNX1Q96RV3 2341 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 IGKV3-7A0A075B6H7 116 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 IGHV1OR15-1A0A075B7D0 117 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 TRAV12-3A0A0B4J271 114 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 TMEM223A0PJW6 202 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 B4DSR2 109 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 LEPROTO15243 131 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 P0DMU3 169 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 FAM231AP0DMU4 169 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 FAM231CP0DMU5 169 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 DSCR9P59020 149 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 TSPEAR-AS2P59090 65 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 SRSF9Q13242 221 aaKnown RBP eCLIP4.21□□□□□ -1.74
VPS33A-203ENST00000536212 ETDBQ3ZM63 59 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 LYRM7Q5U5X0 104 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 Q6Q795 121 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 SCGB1D4Q6XE38 83 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 SH2D6Q7Z4S9 175 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 TRPT1Q86TN4 253 aaKnown RBP4.21□□□□□ -1.74
VPS33A-203ENST00000536212 NDUFA11Q86Y39 141 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 TEX29Q8N6K0 151 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 C20orf203Q8NBC4 194 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 KLHL30-AS1Q8NEE0 82 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 MDFICQ9P1T7 246 aa4.21□□□□□ -1.74
VPS33A-203ENST00000536212 TRBV20-1A0A075B6N2 111 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 J3QLI3 93 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 J3QQQ9 107 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 SPINK8P0C7L1 97 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 ZNF688P0C7X2 276 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 CFC1BP0CG36 223 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 CFC1P0CG37 223 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 SNRPD3P62318 126 aaKnown RBP4.2□□□□□ -1.74
VPS33A-203ENST00000536212 RPL39P62891 51 aaKnown RBP4.2□□□□□ -1.74
VPS33A-203ENST00000536212 C6orf226Q5I0X4 101 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 PIK3CD-AS1Q5SR53 167 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 C10orf126Q8N4M7 172 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 KIR2DL5BQ8NHK3 375 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 LINC01600Q96MT4 127 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 PYGO1Q9Y3Y4 419 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 V9GYY9 64 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 ACACAQ13085 2346 aa4.2□□□□□ -1.74
VPS33A-203ENST00000536212 IGLV4-3A0A075B6K6 122 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 A0A096LNT2 108 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 TRAV2A0A0B4J234 112 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 A0A0B4J2C4 111 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 I3L3M4 83 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 ZNF22P17026 224 aaPredicted RBP4.19□□□□□ -1.74
VPS33A-203ENST00000536212 FOXI1Q12951 378 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 ZNF56Q15929 161 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 DEFB112Q30KQ8 113 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 TMEM170BQ5T4T1 132 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 DUX3Q96PT4 197 aa4.19□□□□□ -1.74
VPS33A-203ENST00000536212 PTPRQQ9UMZ3 2332 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 DMDP11532 3685 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 M0R2P5 195 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 RHODO00212 210 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 APOMO95445 188 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 TCL1BO95988 128 aa4.18□□□□□ -1.74
VPS33A-203ENST00000536212 IGHV3-33P01772 117 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms