RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 EDA2RQ9HAV5 297 aa11.8□□□□□ -0.52
CHMP1A-202ENST00000535997 BEX4Q9NWD9 120 aaPredicted RBP11.8□□□□□ -0.52
CHMP1A-202ENST00000535997 POLQO75417 2590 aa11.79□□□□□ -0.52
CHMP1A-202ENST00000535997 CENPEQ02224 2701 aa11.79□□□□□ -0.52
CHMP1A-202ENST00000535997 J3QQQ9 107 aa11.79□□□□□ -0.52
CHMP1A-202ENST00000535997 FAM208BQ5VWN6 2430 aa11.78□□□□□ -0.52
CHMP1A-202ENST00000535997 A8MTW9 85 aa11.78□□□□□ -0.52
CHMP1A-202ENST00000535997 IGHV4-31P0DP07 118 aa11.78□□□□□ -0.52
CHMP1A-202ENST00000535997 TRAV2A0A0B4J234 112 aa11.77□□□□□ -0.52
CHMP1A-202ENST00000535997 TSPEAR-AS2P59090 65 aa11.77□□□□□ -0.52
CHMP1A-202ENST00000535997 AMELXQ99217 191 aa11.77□□□□□ -0.52
CHMP1A-202ENST00000535997 OPRPNQ99935 248 aaPredicted RBP11.77□□□□□ -0.52
CHMP1A-202ENST00000535997 FBN2P35556 2912 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 KNCNA6PVL3 124 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 H3BMM0 161 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 J3QR89 54 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 IGHV3-30P01768 117 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 RBMY1A1P0DJD3 496 aaKnown RBP11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 RBMY1CP0DJD4 496 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 IGHV3-30-5P0DP03 117 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 DEFB131AP59861 70 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 RBMY1FQ15415 496 aaKnown RBP11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 Q5PR19 223 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 Q8N2B8 174 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 VCX2Q9H322 139 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 PRO0461Q9UI25 63 aa11.77□□□□□ -0.53
CHMP1A-202ENST00000535997 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
CHMP1A-202ENST00000535997 PIK3CD-AS1Q5SR53 167 aa11.76□□□□□ -0.53
CHMP1A-202ENST00000535997 TMEM223A0PJW6 202 aa11.76□□□□□ -0.53
CHMP1A-202ENST00000535997 SLURP1P55000 103 aa11.76□□□□□ -0.53
CHMP1A-202ENST00000535997 NDUFA11Q86Y39 141 aa11.76□□□□□ -0.53
CHMP1A-202ENST00000535997 SPAG8Q99932 426 aaPredicted RBP11.76□□□□□ -0.53
CHMP1A-202ENST00000535997 LEPROTO15243 131 aa11.75□□□□□ -0.53
CHMP1A-202ENST00000535997 HTN1P15515 57 aa11.75□□□□□ -0.53
CHMP1A-202ENST00000535997 ETDBQ3ZM63 59 aa11.75□□□□□ -0.53
CHMP1A-202ENST00000535997 PEMTQ9UBM1 199 aa11.75□□□□□ -0.53
CHMP1A-202ENST00000535997 PYGO1Q9Y3Y4 419 aa11.75□□□□□ -0.53
CHMP1A-202ENST00000535997 IGLV4-3A0A075B6K6 122 aa11.75□□□□□ -0.53
CHMP1A-202ENST00000535997 A8MWV9 139 aa11.75□□□□□ -0.53
CHMP1A-202ENST00000535997 DLX4Q92988 240 aaPredicted RBP11.75□□□□□ -0.53
CHMP1A-202ENST00000535997 LRRK2Q5S007 2527 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 RHODO00212 210 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 TSPAN13O95857 204 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 DEFB136Q30KP8 78 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 M0R2P5 195 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 APOMO95445 188 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 CRYBA4P53673 196 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 UBE2D3P61077 147 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 UBE2D2P62837 147 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 C18orf65Q6ZTR6 163 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 PTH2Q96A98 100 aa11.74□□□□□ -0.53
CHMP1A-202ENST00000535997 PTPN13Q12923 2485 aa11.73□□□□□ -0.53
CHMP1A-202ENST00000535997 TEX15Q9BXT5 2789 aa11.73□□□□□ -0.53
CHMP1A-202ENST00000535997 ZNF22P17026 224 aaPredicted RBP11.73□□□□□ -0.53
CHMP1A-202ENST00000535997 SH2D6Q7Z4S9 175 aa11.73□□□□□ -0.53
CHMP1A-202ENST00000535997 DUX3Q96PT4 197 aa11.73□□□□□ -0.53
CHMP1A-202ENST00000535997 PRRC2AP48634 2157 aaKnown RBP11.73□□□□□ -0.53
CHMP1A-202ENST00000535997 CFC1BP0CG36 223 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 CFC1P0CG37 223 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 LYRM7Q5U5X0 104 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 TNFRSF18Q9Y5U5 241 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 CR1P17927 2039 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 LOC107984156A0A0G2JMH3 177 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 ARL17AQ8IVW1 177 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 TMEM61Q8N0U2 210 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
CHMP1A-202ENST00000535997 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.53
CHMP1A-202ENST00000535997 A0A0J9YXV3 536 aa11.71□□□□□ -0.53
CHMP1A-202ENST00000535997 RBMY1BA6NDE4 496 aaKnown RBP11.71□□□□□ -0.53
CHMP1A-202ENST00000535997 RBMY1EA6NEQ0 496 aaKnown RBP11.71□□□□□ -0.53
CHMP1A-202ENST00000535997 RBMY1DP0C7P1 496 aaKnown RBP11.71□□□□□ -0.53
CHMP1A-202ENST00000535997 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.53
CHMP1A-202ENST00000535997 MYO9AB2RTY4 2548 aa11.71□□□□□ -0.53
CHMP1A-202ENST00000535997 PROK1P58294 105 aa11.71□□□□□ -0.54
CHMP1A-202ENST00000535997 C10orf126Q8N4M7 172 aa11.71□□□□□ -0.54
CHMP1A-202ENST00000535997 NAV2Q8IVL1 2488 aa11.7□□□□□ -0.54
CHMP1A-202ENST00000535997 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
CHMP1A-202ENST00000535997 CFAP126Q5VTH2 177 aa11.7□□□□□ -0.54
CHMP1A-202ENST00000535997 LRRC75A-AS1Q8N1F1 130 aa11.7□□□□□ -0.54
CHMP1A-202ENST00000535997 PRO1854Q9UHT4 67 aa11.7□□□□□ -0.54
CHMP1A-202ENST00000535997 DEFB113Q30KQ7 82 aa11.7□□□□□ -0.54
CHMP1A-202ENST00000535997 MTURNQ8N3F0 131 aa11.7□□□□□ -0.54
CHMP1A-202ENST00000535997 LINC00467Q9BRT7 94 aa11.7□□□□□ -0.54
CHMP1A-202ENST00000535997 TRBV20-1A0A075B6N2 111 aa11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 PRB1P04280 392 aa11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 PSMB2P49721 201 aa11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 MRPS36P82909 103 aaKnown RBP11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 FAM104AQ969W3 186 aa11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 ZFYVE26Q68DK2 2539 aa11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 CD28P10747 220 aa11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 KRTAP10-9P60411 292 aa11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 MAP6D1Q9H9H5 199 aa11.69□□□□□ -0.54
CHMP1A-202ENST00000535997 PRM2P04554 102 aa11.68□□□□□ -0.54
CHMP1A-202ENST00000535997 DEFB114Q30KQ6 69 aa11.68□□□□□ -0.54
CHMP1A-202ENST00000535997 LINC01587Q99440 93 aa11.68□□□□□ -0.54
CHMP1A-202ENST00000535997 GAGE12HA6NDE8 117 aa11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 SFTA2Q6UW10 78 aa11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 ATP6V0E2Q8NHE4 81 aa11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 DYNLRB2Q8TF09 96 aa11.67□□□□□ -0.54
CHMP1A-202ENST00000535997 RAX2Q96IS3 184 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms