RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 RBMY1DP0C7P1 496 aaKnown RBP5.9□□□□□ -1.46
COL21A1-212ENST00000535941 RNASE3P12724 160 aaKnown RBP5.9□□□□□ -1.46
COL21A1-212ENST00000535941 IL17DQ8TAD2 202 aa5.9□□□□□ -1.46
COL21A1-212ENST00000535941 C9orf85Q96MD7 179 aa5.9□□□□□ -1.46
COL21A1-212ENST00000535941 C19orf73Q9NVV2 129 aa5.9□□□□□ -1.46
COL21A1-212ENST00000535941 LOC107984156A0A0G2JMH3 177 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 CRLF1O75462 422 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 HLA-DRB4P13762 266 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 C12orf74Q32Q52 190 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 MEIG1Q5JSS6 88 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 FAM104BQ5XKR9 115 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 SFTA2Q6UW10 78 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 FAM159AQ6UWV7 190 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 ARL17AQ8IVW1 177 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 HLA-DRB4X5D2U9 266 aa5.9□□□□□ -1.47
COL21A1-212ENST00000535941 NSD1Q96L73 2696 aaPredicted RBP5.9□□□□□ -1.47
COL21A1-212ENST00000535941 TRBV25-1A0A075B6N4 114 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 TMSB15BA0A087X1C1 80 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 SNCGO76070 127 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 PRB4P10163 310 aaPredicted RBP5.89□□□□□ -1.47
COL21A1-212ENST00000535941 RIGQ13278 110 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 KLHL30-AS1Q8NEE0 82 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 OR10J6PQ8NGY7 276 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 EDA2RQ9HAV5 297 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 DKK2Q9UBU2 259 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 KIF25-AS1Q9Y6Z4 181 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 NF1P21359 2839 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 HBDP02042 147 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 PRSS1P07477 247 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 DEFB1P60022 68 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 RRN3P1Q2M238 152 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 BEAN1Q3B7T3 259 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 NDUFA11Q86Y39 141 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 PHLDA1Q8WV24 401 aaPredicted RBP5.89□□□□□ -1.47
COL21A1-212ENST00000535941 HIGD1BQ9P298 99 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 IGLV2-18A0A075B6J9 118 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 SMIM9A6NGZ8 99 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 F6UB75 175 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 H3BVH4 76 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 SRSF9Q13242 221 aaKnown RBP eCLIP5.89□□□□□ -1.47
COL21A1-212ENST00000535941 PPDPFLQ8WWR9 84 aa5.89□□□□□ -1.47
COL21A1-212ENST00000535941 NACAE9PAV3 2078 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 AGRNO00468 2067 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 TRAV21A0A0B4J279 112 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 WIPF1O43516 503 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 RBMY1A1P0DJD3 496 aaKnown RBP5.88□□□□□ -1.47
COL21A1-212ENST00000535941 RBMY1CP0DJD4 496 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 PSMB2P49721 201 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 LINC00315P59091 139 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 RBMY1FQ15415 496 aaKnown RBP5.88□□□□□ -1.47
COL21A1-212ENST00000535941 ATP6V0E2Q8NHE4 81 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 A0A087WX48 190 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 CCL24O00175 119 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 IGLV1-51P01701 117 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 LEPP41159 167 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 GTSCR1Q86UQ5 136 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 MAP1LC3AQ9H492 121 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 MAP6D1Q9H9H5 199 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 PRO0461Q9UI25 63 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 CSPG4Q6UVK1 2322 aa5.88□□□□□ -1.47
COL21A1-212ENST00000535941 A0A096LNJ9 63 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 IGKV2D-26A0A0A0MRZ7 120 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 TMEM262E9PQX1 116 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 H3BMM0 161 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 NDUFV3P56181 108 aaKnown RBP5.87□□□□□ -1.47
COL21A1-212ENST00000535941 NFE4Q86UQ8 179 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 TMEM61Q8N0U2 210 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 PIK3CD-AS1Q5SR53 167 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 NRACQ8N912 160 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 INAFM1C9JVW0 142 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 D6R8Y8 96 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 F5H768 121 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 NHLRC4P0CG21 123 aaPredicted RBP5.87□□□□□ -1.47
COL21A1-212ENST00000535941 IFITM1P13164 125 aa5.87□□□□□ -1.47
COL21A1-212ENST00000535941 MRPL51Q4U2R6 128 aaKnown RBP5.87□□□□□ -1.47
COL21A1-212ENST00000535941 DUSP14O95147 198 aaKnown RBP5.86□□□□□ -1.47
COL21A1-212ENST00000535941 EVI2AP22794 236 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 SNRPD3P62318 126 aaKnown RBP5.86□□□□□ -1.47
COL21A1-212ENST00000535941 ODF3L2Q3SX64 289 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 PSMG4Q5JS54 123 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 CREBBPQ92793 2442 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 IGHV3-16A0A0C4DH30 117 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 ZNF688P0C7X2 276 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 EMP1P54849 157 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 ZC2HC1BQ5TFG8 222 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 CFAP126Q5VTH2 177 aa5.86□□□□□ -1.47
COL21A1-212ENST00000535941 TRPT1Q86TN4 253 aaKnown RBP5.86□□□□□ -1.47
COL21A1-212ENST00000535941 IGKCP01834 107 aa5.85□□□□□ -1.47
COL21A1-212ENST00000535941 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
COL21A1-212ENST00000535941 MSRB1Q9NZV6 116 aa5.85□□□□□ -1.47
COL21A1-212ENST00000535941 HIVEP1P15822 2718 aa5.85□□□□□ -1.47
COL21A1-212ENST00000535941 GIG44P09565 113 aaPredicted RBP5.85□□□□□ -1.47
COL21A1-212ENST00000535941 LINC00694P0DN24 101 aa5.85□□□□□ -1.47
COL21A1-212ENST00000535941 LYRM7Q5U5X0 104 aa5.85□□□□□ -1.47
COL21A1-212ENST00000535941 ORMDL3Q8N138 153 aa5.85□□□□□ -1.47
COL21A1-212ENST00000535941 DUX3Q96PT4 197 aa5.85□□□□□ -1.47
COL21A1-212ENST00000535941 A8MWV9 139 aa5.84□□□□□ -1.47
COL21A1-212ENST00000535941 M0R381 172 aa5.84□□□□□ -1.47
COL21A1-212ENST00000535941 RHODO00212 210 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms