RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 COX19Q49B96 90 aa10.84□□□□□ -0.67
CNN1-202ENST00000535659 MRPL51Q4U2R6 128 aaKnown RBP10.84□□□□□ -0.67
CNN1-202ENST00000535659 TMEM136Q6ZRR5 245 aa10.84□□□□□ -0.67
CNN1-202ENST00000535659 MRAP2Q96G30 205 aa10.84□□□□□ -0.67
CNN1-202ENST00000535659 GAGE12JA6NER3 117 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 SRIP30626 198 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 RPL36AP83881 106 aaKnown RBP10.83□□□□□ -0.68
CNN1-202ENST00000535659 GAGE1Q13065 139 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 GAGE4Q13068 117 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 GAGE5Q13069 117 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 GAGE13Q4V321 117 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 ZNRF2Q8NHG8 242 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 RPL36ALQ969Q0 106 aaKnown RBP10.83□□□□□ -0.68
CNN1-202ENST00000535659 GNB1LQ9BYB4 327 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 NIT2Q9NQR4 276 aa10.83□□□□□ -0.68
CNN1-202ENST00000535659 TRBV7-3A0A075B6L6 115 aa10.82□□□□□ -0.68
CNN1-202ENST00000535659 SH2D6Q7Z4S9 175 aa10.82□□□□□ -0.68
CNN1-202ENST00000535659 NEXN-AS1Q8NBZ9 246 aa10.82□□□□□ -0.68
CNN1-202ENST00000535659 DNAJC30Q96LL9 226 aa10.82□□□□□ -0.68
CNN1-202ENST00000535659 TENM2Q9NT68 2774 aa10.82□□□□□ -0.68
CNN1-202ENST00000535659 NEGR1Q7Z3B1 354 aa10.81□□□□□ -0.68
CNN1-202ENST00000535659 TNFRSF18Q9Y5U5 241 aa10.81□□□□□ -0.68
CNN1-202ENST00000535659 SCO1O75880 301 aa10.8□□□□□ -0.68
CNN1-202ENST00000535659 GAS8-AS1O95177 125 aa10.8□□□□□ -0.68
CNN1-202ENST00000535659 HLA-DQA1P01909 254 aa10.8□□□□□ -0.68
CNN1-202ENST00000535659 CKS2P33552 79 aa10.8□□□□□ -0.68
CNN1-202ENST00000535659 SMKR1H3BMG3 65 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 PPBPP02775 128 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 LINC00694P0DN24 101 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 ATP6V0E2Q8NHE4 81 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 RPL39LQ96EH5 51 aaKnown RBP10.79□□□□□ -0.68
CNN1-202ENST00000535659 VPS13DQ5THJ4 4388 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 PPP1R17O96001 155 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 APCSP02743 223 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 MT-ND6P03923 174 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 UBE2D3P61077 147 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 UBE2D2P62837 147 aa10.79□□□□□ -0.68
CNN1-202ENST00000535659 DNAH1Q9P2D7 4330 aa10.78□□□□□ -0.68
CNN1-202ENST00000535659 D6R8Y8 96 aa10.78□□□□□ -0.68
CNN1-202ENST00000535659 NCR2O95944 276 aa10.78□□□□□ -0.68
CNN1-202ENST00000535659 RPS10P46783 165 aaKnown RBP10.78□□□□□ -0.68
CNN1-202ENST00000535659 ESRGQ1W209 222 aa10.78□□□□□ -0.68
CNN1-202ENST00000535659 OR10J3Q5JRS4 329 aa10.78□□□□□ -0.68
CNN1-202ENST00000535659 LYPD5Q6UWN5 251 aa10.78□□□□□ -0.68
CNN1-202ENST00000535659 ALMS1Q8TCU4 4167 aa10.77□□□□□ -0.69
CNN1-202ENST00000535659 TRBV6-5A0A0K0K1A5 114 aa10.77□□□□□ -0.69
CNN1-202ENST00000535659 COLCA2A8K830 154 aa10.77□□□□□ -0.69
CNN1-202ENST00000535659 ORMDL3Q8N138 153 aa10.77□□□□□ -0.69
CNN1-202ENST00000535659 NRACQ8N912 160 aa10.77□□□□□ -0.69
CNN1-202ENST00000535659 MRPL18Q9H0U6 180 aaKnown RBP10.77□□□□□ -0.69
CNN1-202ENST00000535659 ST20Q9HBF5 79 aa10.77□□□□□ -0.69
CNN1-202ENST00000535659 TRAPPC1Q9Y5R8 145 aa10.77□□□□□ -0.69
CNN1-202ENST00000535659 CCL18P55774 89 aa10.76□□□□□ -0.69
CNN1-202ENST00000535659 FABP9Q0Z7S8 132 aa10.76□□□□□ -0.69
CNN1-202ENST00000535659 DAZ4Q86SG3 579 aaKnown RBP10.76□□□□□ -0.69
CNN1-202ENST00000535659 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.76□□□□□ -0.69
CNN1-202ENST00000535659 GTSF1LQ9H1H1 148 aa10.76□□□□□ -0.69
CNN1-202ENST00000535659 DAZ3Q9NR90 486 aaKnown RBP10.76□□□□□ -0.69
CNN1-202ENST00000535659 TNFRSF6BO95407 300 aa10.75□□□□□ -0.69
CNN1-202ENST00000535659 KIAA1644Q3SXP7 199 aa10.75□□□□□ -0.69
CNN1-202ENST00000535659 PRELID3AQ96N28 172 aa10.75□□□□□ -0.69
CNN1-202ENST00000535659 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
CNN1-202ENST00000535659 SDHAF1A6NFY7 115 aa10.74□□□□□ -0.69
CNN1-202ENST00000535659 TIRAPP58753 221 aa10.74□□□□□ -0.69
CNN1-202ENST00000535659 PHOX2AO14813 284 aa10.74□□□□□ -0.69
CNN1-202ENST00000535659 NPYP01303 97 aa10.74□□□□□ -0.69
CNN1-202ENST00000535659 POLR2KP53803 58 aaKnown RBP10.74□□□□□ -0.69
CNN1-202ENST00000535659 C20orf78Q9BR46 151 aa10.74□□□□□ -0.69
CNN1-202ENST00000535659 LAMTOR2Q9Y2Q5 125 aa10.74□□□□□ -0.69
CNN1-202ENST00000535659 LINC00588Q9Y4M8 146 aa10.74□□□□□ -0.69
CNN1-202ENST00000535659 VCYO14598 125 aa10.73□□□□□ -0.69
CNN1-202ENST00000535659 SUMO2P61956 95 aaKnown RBP10.73□□□□□ -0.69
CNN1-202ENST00000535659 LGALS9CQ6DKI2 356 aa10.73□□□□□ -0.69
CNN1-202ENST00000535659 TMEM70Q9BUB7 260 aa10.73□□□□□ -0.69
CNN1-202ENST00000535659 SACSQ9NZJ4 4579 aa10.72□□□□□ -0.69
CNN1-202ENST00000535659 I3L3M4 83 aa10.72□□□□□ -0.69
CNN1-202ENST00000535659 RAB5AP20339 215 aa10.72□□□□□ -0.69
CNN1-202ENST00000535659 TMEM97Q5BJF2 176 aa10.72□□□□□ -0.69
CNN1-202ENST00000535659 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
CNN1-202ENST00000535659 PRSS47A8MTI9 375 aa10.71□□□□□ -0.69
CNN1-202ENST00000535659 PMCHP20382 165 aa10.71□□□□□ -0.69
CNN1-202ENST00000535659 UBE2DNLQ8IWF7 75 aa10.71□□□□□ -0.69
CNN1-202ENST00000535659 ALKBH7Q9BT30 221 aaPredicted RBP10.71□□□□□ -0.69
CNN1-202ENST00000535659 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
CNN1-202ENST00000535659 LELP1Q5T871 98 aa10.7□□□□□ -0.7
CNN1-202ENST00000535659 NTM-AS1Q6ZSK4 140 aa10.7□□□□□ -0.7
CNN1-202ENST00000535659 MRPS16Q9Y3D3 137 aaKnown RBP10.7□□□□□ -0.7
CNN1-202ENST00000535659 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
CNN1-202ENST00000535659 COTL1Q14019 142 aa10.69□□□□□ -0.7
CNN1-202ENST00000535659 DEFB104AQ8WTQ1 72 aa10.69□□□□□ -0.7
CNN1-202ENST00000535659 TRAV8-6A0A0B4J262 113 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 UPK3BQ9BT76 320 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 MAP1LC3AQ9H492 121 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 LOC389332A0A1B0GUA5 103 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 LY6G6CO95867 125 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 TRGC2P03986 189 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 LINC00476Q8WZB0 136 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 KIR2DL4Q99706 377 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 SMIM2Q9BVW6 85 aa10.68□□□□□ -0.7
CNN1-202ENST00000535659 TRBV25-1A0A075B6N4 114 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms