RNA–Protein interactions for RNA: ENST00000535479.5

LPCAT3-203, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 2,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-203ENST00000535479 SRSF2Q01130 221 aaKnown RBP10.35□□□□□ -0.75
LPCAT3-203ENST00000535479 EIF4EBP3O60516 100 aaPredicted RBP10.35□□□□□ -0.75
LPCAT3-203ENST00000535479 IGHV4-59P01825 116 aa10.35□□□□□ -0.75
LPCAT3-203ENST00000535479 CFC1BP0CG36 223 aa10.35□□□□□ -0.75
LPCAT3-203ENST00000535479 CFC1P0CG37 223 aa10.35□□□□□ -0.75
LPCAT3-203ENST00000535479 NBL1P41271 181 aa10.35□□□□□ -0.75
LPCAT3-203ENST00000535479 A0A0J9YY99 117 aa10.34□□□□□ -0.75
LPCAT3-203ENST00000535479 PRSS2P07478 247 aa10.34□□□□□ -0.75
LPCAT3-203ENST00000535479 Q1RN00 199 aa10.34□□□□□ -0.75
LPCAT3-203ENST00000535479 COX6B1P14854 86 aa10.34□□□□□ -0.75
LPCAT3-203ENST00000535479 CARD19Q96LW7 228 aa10.34□□□□□ -0.75
LPCAT3-203ENST00000535479 SETXQ7Z333 2677 aaKnown RBP10.34□□□□□ -0.75
LPCAT3-203ENST00000535479 GATA3P23771 443 aa10.34□□□□□ -0.75
LPCAT3-203ENST00000535479 C11orf44Q8N8P7 122 aa10.34□□□□□ -0.75
LPCAT3-203ENST00000535479 TMEM190Q8WZ59 177 aa10.33□□□□□ -0.76
LPCAT3-203ENST00000535479 A4D1N5 150 aa10.33□□□□□ -0.76
LPCAT3-203ENST00000535479 XGP55808 180 aa10.33□□□□□ -0.76
LPCAT3-203ENST00000535479 FOXI1Q12951 378 aa10.33□□□□□ -0.76
LPCAT3-203ENST00000535479 NDUFA11Q86Y39 141 aa10.33□□□□□ -0.76
LPCAT3-203ENST00000535479 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 ATP5J2P56134 94 aa10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 KIF25-AS1Q9Y6Z4 181 aa10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 TRAV12-1A0A0B4J245 112 aa10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 IGIPA6NJ69 53 aa10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 OVOL1O14753 267 aa10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 ZNF876PQ49A33 203 aa10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 CFAP126Q5VTH2 177 aa10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 DLX4Q92988 240 aaPredicted RBP10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 ZNF625Q96I27 306 aaPredicted RBP10.32□□□□□ -0.76
LPCAT3-203ENST00000535479 GCN1Q92616 2671 aaKnown RBP10.31□□□□□ -0.76
LPCAT3-203ENST00000535479 CKS1BP61024 79 aa10.31□□□□□ -0.76
LPCAT3-203ENST00000535479 C9JAW5 83 aa10.31□□□□□ -0.76
LPCAT3-203ENST00000535479 NDUFA4O00483 81 aa10.31□□□□□ -0.76
LPCAT3-203ENST00000535479 SPINK8P0C7L1 97 aa10.31□□□□□ -0.76
LPCAT3-203ENST00000535479 LGALS3P17931 250 aaKnown RBP10.31□□□□□ -0.76
LPCAT3-203ENST00000535479 PMVKQ15126 192 aa10.31□□□□□ -0.76
LPCAT3-203ENST00000535479 DAZ1Q9NQZ3 744 aaKnown RBP10.31□□□□□ -0.76
LPCAT3-203ENST00000535479 IGHV3OR16-12A0A075B7B8 117 aa10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 J3QQQ9 107 aa10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 KHDC1LQ5JSQ8 128 aa10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 CDIP1Q9H305 208 aa10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 MUSTN1Q8IVN3 82 aa10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 ANKRD29Q8N6D5 301 aa10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 TRAV26-1A0A087WT03 109 aa10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 RBMY1A1P0DJD3 496 aaKnown RBP10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 RBMY1CP0DJD4 496 aa10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 RBMY1FQ15415 496 aaKnown RBP10.3□□□□□ -0.76
LPCAT3-203ENST00000535479 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
LPCAT3-203ENST00000535479 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
LPCAT3-203ENST00000535479 FAM223BA6NKX1 122 aa10.29□□□□□ -0.76
LPCAT3-203ENST00000535479 FAM223AQ8IWN6 122 aa10.29□□□□□ -0.76
LPCAT3-203ENST00000535479 IGHV3-30P01768 117 aa10.29□□□□□ -0.76
LPCAT3-203ENST00000535479 IGHV3-30-5P0DP03 117 aa10.29□□□□□ -0.76
LPCAT3-203ENST00000535479 DCANP1Q8TF63 244 aa10.29□□□□□ -0.76
LPCAT3-203ENST00000535479 J3QR89 54 aa10.28□□□□□ -0.76
LPCAT3-203ENST00000535479 POLR2KP53803 58 aaKnown RBP10.28□□□□□ -0.76
LPCAT3-203ENST00000535479 CCL19Q99731 98 aa10.28□□□□□ -0.76
LPCAT3-203ENST00000535479 C1QTNF4Q9BXJ3 329 aa10.28□□□□□ -0.76
LPCAT3-203ENST00000535479 UBE2D1P51668 147 aa10.28□□□□□ -0.76
LPCAT3-203ENST00000535479 C19orf54Q5BKX5 351 aa10.28□□□□□ -0.76
LPCAT3-203ENST00000535479 Q6ZSN1 163 aa10.27□□□□□ -0.76
LPCAT3-203ENST00000535479 DEFB112Q30KQ8 113 aa10.27□□□□□ -0.77
LPCAT3-203ENST00000535479 MRPL53Q96EL3 112 aaKnown RBP10.27□□□□□ -0.77
LPCAT3-203ENST00000535479 ATP6V0BQ99437 205 aa10.27□□□□□ -0.77
LPCAT3-203ENST00000535479 VCYO14598 125 aa10.27□□□□□ -0.77
LPCAT3-203ENST00000535479 NDUFA7O95182 113 aa10.27□□□□□ -0.77
LPCAT3-203ENST00000535479 TAL2Q16559 108 aa10.27□□□□□ -0.77
LPCAT3-203ENST00000535479 CFAP161Q6P656 301 aa10.27□□□□□ -0.77
LPCAT3-203ENST00000535479 HERVK_113P61574 105 aa10.26□□□□□ -0.77
LPCAT3-203ENST00000535479 APRG1Q8IVJ8 170 aa10.26□□□□□ -0.77
LPCAT3-203ENST00000535479 C10orf126Q8N4M7 172 aa10.26□□□□□ -0.77
LPCAT3-203ENST00000535479 NOTCH2Q04721 2471 aa10.26□□□□□ -0.77
LPCAT3-203ENST00000535479 M0QY20 66 aa10.26□□□□□ -0.77
LPCAT3-203ENST00000535479 IGHG2P01859 326 aa10.26□□□□□ -0.77
LPCAT3-203ENST00000535479 AMELXQ99217 191 aa10.26□□□□□ -0.77
LPCAT3-203ENST00000535479 SLURP1P55000 103 aa10.25□□□□□ -0.77
LPCAT3-203ENST00000535479 ADAMTSL4-AS1Q5T5F5 129 aa10.25□□□□□ -0.77
LPCAT3-203ENST00000535479 FAM19A4Q96LR4 140 aa10.25□□□□□ -0.77
LPCAT3-203ENST00000535479 IGHV4OR15-8A0A075B7B6 117 aa10.25□□□□□ -0.77
LPCAT3-203ENST00000535479 A0A087WW49 117 aa10.25□□□□□ -0.77
LPCAT3-203ENST00000535479 KLLNB2CW77 178 aa10.25□□□□□ -0.77
LPCAT3-203ENST00000535479 SPATA25Q9BR10 227 aa10.25□□□□□ -0.77
LPCAT3-203ENST00000535479 FLNAP21333 2647 aaKnown RBP10.25□□□□□ -0.77
LPCAT3-203ENST00000535479 TRBV20-1A0A075B6N2 111 aa10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 TEX49A0A1B0GTD5 131 aa10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 A6NJY4 79 aa10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 CLEC2BQ92478 149 aa10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 GEMIN7Q9H840 131 aaKnown RBP10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 IGHV3-53P01767 116 aa10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 CD28P10747 220 aa10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 ZNF22P17026 224 aaPredicted RBP10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 NTN5Q8WTR8 489 aaPredicted RBP10.24□□□□□ -0.77
LPCAT3-203ENST00000535479 A6NDX4 124 aa10.23□□□□□ -0.77
LPCAT3-203ENST00000535479 PRO1854Q9UHT4 67 aa10.23□□□□□ -0.77
LPCAT3-203ENST00000535479 CRLF1O75462 422 aa10.23□□□□□ -0.77
LPCAT3-203ENST00000535479 DEFB131AP59861 70 aa10.23□□□□□ -0.77
LPCAT3-203ENST00000535479 CFHR3Q02985 330 aa10.23□□□□□ -0.77
LPCAT3-203ENST00000535479 Q6ZUT4 128 aa10.23□□□□□ -0.77
LPCAT3-203ENST00000535479 PIMREGQ9BSJ6 248 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms