RNA–Protein interactions for RNA: ENST00000535302.6

SPG11-203, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 7,288 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-203ENST00000535302 PTH2Q96A98 100 aa9.7□□□□□ -0.86
SPG11-203ENST00000535302 SRCAPQ6ZRS2 3230 aa9.7□□□□□ -0.86
SPG11-203ENST00000535302 C10orf91Q5T1B1 145 aa9.7□□□□□ -0.86
SPG11-203ENST00000535302 IGFL2Q6UWQ7 119 aa9.7□□□□□ -0.86
SPG11-203ENST00000535302 LGALS9O00182 355 aa9.7□□□□□ -0.86
SPG11-203ENST00000535302 C2orf70A6NJV1 201 aa9.7□□□□□ -0.86
SPG11-203ENST00000535302 CRYGBP07316 175 aa9.7□□□□□ -0.86
SPG11-203ENST00000535302 C16orf54Q6UWD8 224 aa9.7□□□□□ -0.86
SPG11-203ENST00000535302 RIF1Q5UIP0 2472 aaKnown RBP9.7□□□□□ -0.86
SPG11-203ENST00000535302 DAZ2Q13117 558 aaKnown RBP9.7□□□□□ -0.86
SPG11-203ENST00000535302 DAZ4Q86SG3 579 aaKnown RBP9.7□□□□□ -0.86
SPG11-203ENST00000535302 DAZ3Q9NR90 486 aaKnown RBP9.7□□□□□ -0.86
SPG11-203ENST00000535302 UNQ9165/PRO28630Q6UXU0 137 aa9.69□□□□□ -0.86
SPG11-203ENST00000535302 DCANP1Q8TF63 244 aa9.69□□□□□ -0.86
SPG11-203ENST00000535302 PLA2G2EQ9NZK7 142 aa9.69□□□□□ -0.86
SPG11-203ENST00000535302 TP53TG3Q9ULZ0 132 aa9.69□□□□□ -0.86
SPG11-203ENST00000535302 FXYD2P54710 66 aa9.69□□□□□ -0.86
SPG11-203ENST00000535302 MSMPQ1L6U9 139 aa9.69□□□□□ -0.86
SPG11-203ENST00000535302 SPINK6Q6UWN8 80 aa9.69□□□□□ -0.86
SPG11-203ENST00000535302 DIRC1Q969H9 104 aa9.69□□□□□ -0.86
SPG11-203ENST00000535302 TRBV7-3A0A075B6L6 115 aa9.68□□□□□ -0.86
SPG11-203ENST00000535302 A0A087WZ39 114 aa9.68□□□□□ -0.86
SPG11-203ENST00000535302 TMEM263Q8WUH6 116 aaKnown RBP9.68□□□□□ -0.86
SPG11-203ENST00000535302 IGKV1D-37A0A075B6S9 117 aa9.68□□□□□ -0.86
SPG11-203ENST00000535302 COL4A3Q01955 1670 aa9.68□□□□□ -0.86
SPG11-203ENST00000535302 C19orf84I3L1E1 186 aa9.68□□□□□ -0.86
SPG11-203ENST00000535302 KRTAP27-1Q3LI81 207 aa9.68□□□□□ -0.86
SPG11-203ENST00000535302 NDUFC2O95298 119 aa9.67□□□□□ -0.86
SPG11-203ENST00000535302 FRMD6-AS1P0C7T7 363 aa9.67□□□□□ -0.86
SPG11-203ENST00000535302 IL15RAQ13261 267 aa9.67□□□□□ -0.86
SPG11-203ENST00000535302 PPDPFQ9H3Y8 114 aa9.67□□□□□ -0.86
SPG11-203ENST00000535302 KLK5Q9Y337 293 aaPredicted RBP9.67□□□□□ -0.86
SPG11-203ENST00000535302 LINC01548A6NM66 108 aa9.67□□□□□ -0.86
SPG11-203ENST00000535302 LINC00269Q8N2A0 174 aa9.67□□□□□ -0.86
SPG11-203ENST00000535302 B9D2Q9BPU9 175 aa9.67□□□□□ -0.86
SPG11-203ENST00000535302 SPANXA1Q9NS26 97 aa9.67□□□□□ -0.86
SPG11-203ENST00000535302 ODF3L1Q8IXM7 274 aa9.66□□□□□ -0.86
SPG11-203ENST00000535302 WNK1Q9H4A3 2382 aa9.66□□□□□ -0.86
SPG11-203ENST00000535302 FAM19A5Q7Z5A7 132 aaPredicted RBP9.66□□□□□ -0.86
SPG11-203ENST00000535302 NFE4Q86UQ8 179 aa9.66□□□□□ -0.86
SPG11-203ENST00000535302 MALRD1Q5VYJ5 2156 aa9.65□□□□□ -0.86
SPG11-203ENST00000535302 IGLV2-14P01704 120 aa9.65□□□□□ -0.86
SPG11-203ENST00000535302 FAM19A1Q7Z5A9 133 aa9.65□□□□□ -0.86
SPG11-203ENST00000535302 SDIM1Q6ZPB5 146 aa9.65□□□□□ -0.86
SPG11-203ENST00000535302 C3orf22Q8N5N4 141 aa9.65□□□□□ -0.86
SPG11-203ENST00000535302 FREM1Q5H8C1 2179 aa9.64□□□□□ -0.87
SPG11-203ENST00000535302 SMAD5-AS1Q9Y6J3 95 aa9.64□□□□□ -0.87
SPG11-203ENST00000535302 DNAJC9-AS1A6NH13 148 aa9.64□□□□□ -0.87
SPG11-203ENST00000535302 Q6ZUT4 128 aa9.64□□□□□ -0.87
SPG11-203ENST00000535302 NUP210Q8TEM1 1887 aaPredicted RBP9.64□□□□□ -0.87
SPG11-203ENST00000535302 TRBV10-2A0A0K0K1G8 114 aa9.64□□□□□ -0.87
SPG11-203ENST00000535302 UPK3BQ9BT76 320 aa9.64□□□□□ -0.87
SPG11-203ENST00000535302 PRR4Q16378 134 aa9.63□□□□□ -0.87
SPG11-203ENST00000535302 Q8NA96 180 aa9.63□□□□□ -0.87
SPG11-203ENST00000535302 C4orf3Q8WVX3 66 aa9.63□□□□□ -0.87
SPG11-203ENST00000535302 Q8NFD4 153 aa9.63□□□□□ -0.87
SPG11-203ENST00000535302 C11orf45Q8TAV5 145 aa9.63□□□□□ -0.87
SPG11-203ENST00000535302 LINC00526Q96FQ7 95 aa9.63□□□□□ -0.87
SPG11-203ENST00000535302 TEX49A0A1B0GTD5 131 aa9.63□□□□□ -0.87
SPG11-203ENST00000535302 SIVA1O15304 175 aa9.62□□□□□ -0.87
SPG11-203ENST00000535302 LINC01620Q4KN68 170 aa9.62□□□□□ -0.87
SPG11-203ENST00000535302 FAM167A-AS1Q96KT0 104 aa9.62□□□□□ -0.87
SPG11-203ENST00000535302 LINC00482Q8N8I6 264 aa9.62□□□□□ -0.87
SPG11-203ENST00000535302 COX7BP24311 80 aa9.61□□□□□ -0.87
SPG11-203ENST00000535302 C11orf86A6NJI1 115 aa9.61□□□□□ -0.87
SPG11-203ENST00000535302 C3orf84H3BNL1 204 aa9.61□□□□□ -0.87
SPG11-203ENST00000535302 CRYGDP07320 174 aa9.61□□□□□ -0.87
SPG11-203ENST00000535302 LOXL1Q08397 574 aaPredicted RBP9.61□□□□□ -0.87
SPG11-203ENST00000535302 ATOX1O00244 68 aa9.6□□□□□ -0.87
SPG11-203ENST00000535302 PLXNB3Q9ULL4 1909 aa9.6□□□□□ -0.87
SPG11-203ENST00000535302 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
SPG11-203ENST00000535302 USP17L23D6RBM5 183 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 H0YGX0 51 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 C22orf34Q6ZV56 151 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 LENEPQ9Y5L5 61 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 PLXNB1O43157 2135 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 PCDH15Q96QU1 1955 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 IGKV2-28A0A075B6P5 120 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 IGKV2D-28P01615 120 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 XAGE1AQ9HD64 81 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 INAFM1C9JVW0 142 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 PKIGQ9Y2B9 76 aa9.59□□□□□ -0.87
SPG11-203ENST00000535302 BPY2O14599 106 aa9.58□□□□□ -0.88
SPG11-203ENST00000535302 ATRXP46100 2492 aa9.58□□□□□ -0.88
SPG11-203ENST00000535302 MUC4Q99102 2169 aa9.58□□□□□ -0.88
SPG11-203ENST00000535302 IGLV1-47P01700 117 aa9.58□□□□□ -0.88
SPG11-203ENST00000535302 NDUFV3P56181 108 aaKnown RBP9.58□□□□□ -0.88
SPG11-203ENST00000535302 POM121L12Q8N7R1 296 aa9.58□□□□□ -0.88
SPG11-203ENST00000535302 MAP6D1Q9H9H5 199 aa9.58□□□□□ -0.88
SPG11-203ENST00000535302 TOMM6Q96B49 74 aa9.58□□□□□ -0.88
SPG11-203ENST00000535302 TMEM256-PLSCR3K7ERE1 68 aa9.58□□□□□ -0.88
SPG11-203ENST00000535302 Q6ZTI0 123 aa9.57□□□□□ -0.88
SPG11-203ENST00000535302 IGLV9-49A0A0B4J1Y8 123 aa9.57□□□□□ -0.88
SPG11-203ENST00000535302 DAZAP2Q15038 168 aaPredicted RBP9.57□□□□□ -0.88
SPG11-203ENST00000535302 C1orf158Q8N1D5 194 aa9.57□□□□□ -0.88
SPG11-203ENST00000535302 TP73-AS1Q9UF72 201 aa9.57□□□□□ -0.88
SPG11-203ENST00000535302 CCDC140Q96MF4 163 aa9.57□□□□□ -0.88
SPG11-203ENST00000535302 C10orf99Q6UWK7 81 aa9.57□□□□□ -0.88
SPG11-203ENST00000535302 ENHOQ6UWT2 76 aa9.57□□□□□ -0.88
SPG11-203ENST00000535302 UBE2D4Q9Y2X8 147 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms