RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 MITD1Q8WV92 249 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 DIRC1Q969H9 104 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
CLIP1-206ENST00000535290 IGLV4-60A0A075B6I1 120 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 A0A1W2PNN7 141 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 GAGE12HA6NDE8 117 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 GAGE10A6NGK3 116 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 ARMS2P0C7Q2 107 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 AP3S2P59780 193 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 HBG1P69891 147 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 HBG2P69892 147 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 ATP6V1FQ16864 119 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 SMUG1Q53HV7 270 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 FAM74A1Q5RGS3 127 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 OR11H4Q8NGC9 324 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 PSG8Q9UQ74 426 aa4.94□□□□□ -1.62
CLIP1-206ENST00000535290 H0Y9J4 135 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 M0R381 172 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 IGLV7-43P04211 117 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 SPCS2Q15005 226 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 KHDC3LQ587J8 217 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 PRR27Q6MZM9 219 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 PRNTQ86SH4 94 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 STX12Q86Y82 276 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 DERL1Q9BUN8 251 aa4.93□□□□□ -1.62
CLIP1-206ENST00000535290 TRBV25-1A0A075B6N4 114 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 GVQW2A0A096LPI5 108 aaPredicted RBP4.92□□□□□ -1.62
CLIP1-206ENST00000535290 TRAV1-1A0A0B4J248 108 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 TRBV6-1A0A0K0K1D8 114 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 GRIFINA4D1Z8 144 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 FAM25EA8MYX2 175 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 TCRAP04437 139 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 RAB2AP61019 212 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 IQCJQ1A5X6 159 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 ZFP69Q49AA0 526 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 LINC00526Q96FQ7 95 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 CTDSP1Q9GZU7 261 aa4.92□□□□□ -1.62
CLIP1-206ENST00000535290 KRTAP23-1A1A580 65 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 B4DEV8 164 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 M0R036 132 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 NDUFB6O95139 128 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 PVALBP20472 110 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-206ENST00000535290 UBE2D1P51668 147 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 TAS2R45P59539 299 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 RAB4BP61018 213 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 SUMO2P61956 95 aaKnown RBP4.91□□□□□ -1.62
CLIP1-206ENST00000535290 FLI1Q01543 452 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-206ENST00000535290 PYDC2Q56P42 97 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 TMEM97Q5BJF2 176 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.91□□□□□ -1.62
CLIP1-206ENST00000535290 OR5C1Q8NGR4 320 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 WDR61Q9GZS3 305 aaKnown RBP4.91□□□□□ -1.62
CLIP1-206ENST00000535290 PHLDA3Q9Y5J5 127 aa4.91□□□□□ -1.62
CLIP1-206ENST00000535290 A0A1B0GUV1 79 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 SERTM2A0A1B0GWG4 89 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 FABP5P3A8MUU1 101 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 KRBOX1C9JBD0 128 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 RPL13AP40429 203 aaKnown RBP4.9□□□□□ -1.63
CLIP1-206ENST00000535290 AMTP48728 403 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 SULT1A2P50226 295 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 CYCSP99999 105 aaKnown RBP4.9□□□□□ -1.63
CLIP1-206ENST00000535290 GAGE2BQ13066 116 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 ZNF56Q15929 161 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 DNLZQ5SXM8 178 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 PHF5AQ7RTV0 110 aaKnown RBP4.9□□□□□ -1.63
CLIP1-206ENST00000535290 AQP10Q96PS8 301 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 KCNIP2Q9NS61 270 aa4.9□□□□□ -1.63
CLIP1-206ENST00000535290 IGHV1-24A0A0C4DH33 117 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 IGKV3OR2-268A0A0C4DH90 116 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 ATP6V1G2O95670 118 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 TPT1P13693 172 aaKnown RBP4.89□□□□□ -1.63
CLIP1-206ENST00000535290 CRIP1P50238 77 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 IL15RAQ13261 267 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 C9orf116Q5BN46 136 aaPredicted RBP4.89□□□□□ -1.63
CLIP1-206ENST00000535290 SAPCD1Q5SSQ6 148 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 KRTAP11-1Q8IUC1 163 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 ZFP82Q8N141 532 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 C5orf17Q8NAS9 161 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 DEDD2Q8WXF8 326 aa4.89□□□□□ -1.63
CLIP1-206ENST00000535290 TMSB15BA0A087X1C1 80 aa4.88□□□□□ -1.63
CLIP1-206ENST00000535290 TRAV34A0A0B4J273 112 aa4.88□□□□□ -1.63
CLIP1-206ENST00000535290 K7EQM0 130 aa4.88□□□□□ -1.63
CLIP1-206ENST00000535290 HMGB3O15347 200 aaKnown RBP4.88□□□□□ -1.63
CLIP1-206ENST00000535290 CHCHD10Q8WYQ3 142 aaPredicted RBP4.88□□□□□ -1.63
CLIP1-206ENST00000535290 CARD19Q96LW7 228 aa4.88□□□□□ -1.63
CLIP1-206ENST00000535290 SDHCQ99643 169 aaPredicted RBP4.88□□□□□ -1.63
CLIP1-206ENST00000535290 RETNLBQ9BQ08 111 aa4.88□□□□□ -1.63
CLIP1-206ENST00000535290 MRPS26Q9BYN8 205 aaKnown RBP4.88□□□□□ -1.63
CLIP1-206ENST00000535290 PKIGQ9Y2B9 76 aa4.88□□□□□ -1.63
CLIP1-206ENST00000535290 V9GYH0 126 aa4.88□□□□□ -1.63
CLIP1-206ENST00000535290 C17orf112F2Z3M2 114 aa4.87□□□□□ -1.63
CLIP1-206ENST00000535290 EIF5AP63241 154 aaKnown RBP4.87□□□□□ -1.63
CLIP1-206ENST00000535290 PQLC2Q6ZP29 291 aa4.87□□□□□ -1.63
CLIP1-206ENST00000535290 TMEM243Q9BU79 118 aa4.87□□□□□ -1.63
CLIP1-206ENST00000535290 KRTAP4-1Q9BYQ7 146 aa4.87□□□□□ -1.63
CLIP1-206ENST00000535290 EPDR1Q9UM22 224 aa4.87□□□□□ -1.63
CLIP1-206ENST00000535290 ARL2-SNX15V9GYD0 113 aa4.87□□□□□ -1.63
CLIP1-206ENST00000535290 TRAV6A0A075B6T7 132 aa4.86□□□□□ -1.63
CLIP1-206ENST00000535290 A0A087WZ39 114 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms