RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 AKR1D1P51857 326 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 HSPE1P61604 102 aaKnown RBP-1.4□□□□□ -2.63
COPB1-212ENST00000534771 RTL8BQ17RB0 113 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 DEFB112Q30KQ8 113 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 NDUFA11Q86Y39 141 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 OR51A4Q8NGJ6 313 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 BRK1Q8WUW1 75 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 LINC00472Q9H8W2 130 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 IL20Q9NYY1 176 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 FAM135BQ49AJ0 1406 aa-1.4□□□□□ -2.63
COPB1-212ENST00000534771 EP400Q96L91 3159 aa-1.41□□□□□ -2.63
COPB1-212ENST00000534771 PTPRMP28827 1452 aa-1.41□□□□□ -2.63
COPB1-212ENST00000534771 MAP1LC3B2A6NCE7 125 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 G3V2T6 193 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 SLC25A4P12235 298 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 CKS2P33552 79 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 KRTAP19-5Q3LI72 72 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 OTOSQ8NHW6 89 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 IFI27L1Q96BM0 104 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 BORCS8Q96FH0 119 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 PAIP2Q9BPZ3 127 aaKnown RBP-1.41□□□□□ -2.64
COPB1-212ENST00000534771 LXNQ9BS40 222 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 NPVFQ9HCQ7 196 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 MED11Q9P086 117 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 CCDC171Q6TFL3 1326 aa-1.41□□□□□ -2.64
COPB1-212ENST00000534771 KDM5AP29375 1690 aaKnown RBP-1.42□□□□□ -2.64
COPB1-212ENST00000534771 MGAQ8IWI9 3026 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.42□□□□□ -2.64
COPB1-212ENST00000534771 SMIM23A6NLE4 172 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 H7C1C5 153 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 PGRMC1O00264 195 aaKnown RBP-1.42□□□□□ -2.64
COPB1-212ENST00000534771 CETN3O15182 167 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 DEFB1P60022 68 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 NPC2P61916 151 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 ARF6P62330 175 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 LCN6P62502 163 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 BLCAPP62952 87 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 CFAP126Q5VTH2 177 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 Q5VV11 94 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 MORN4Q8NDC4 146 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 DEFB105AQ8NG35 78 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 WFDC6Q9BQY6 131 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 DNAJC13O75165 2243 aa-1.42□□□□□ -2.64
COPB1-212ENST00000534771 RPP14O95059 124 aaKnown RBP-1.43□□□□□ -2.64
COPB1-212ENST00000534771 MT1EP04732 61 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 EDDM3BP56851 147 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 ERVS71-1P61550 626 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 RPL19P84098 196 aaKnown RBP-1.43□□□□□ -2.64
COPB1-212ENST00000534771 NUP35Q8NFH5 326 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 LRTM1Q9HBL6 345 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 OTORQ9NRC9 128 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 TAS2R8Q9NYW2 309 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 SSR3Q9UNL2 185 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 NDUFAF1Q9Y375 327 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 MYH1P12882 1939 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 CASKIN1Q8WXD9 1431 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 PARP14Q460N5 1801 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 KIF13AQ9H1H9 1805 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 WDFY3Q8IZQ1 3526 aa-1.43□□□□□ -2.64
COPB1-212ENST00000534771 DCHS1Q96JQ0 3298 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 ARFGEF1Q9Y6D6 1849 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 TRAV2A0A0B4J234 112 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 TRBV27A0A0K0K1C4 114 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 PNMA8CA0A1B0GUJ8 204 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 FAM25EA8MYX2 175 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 RPS17P08708 135 aaKnown RBP-1.44□□□□□ -2.64
COPB1-212ENST00000534771 SDC2P34741 201 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 PPP1R2P41236 205 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 LSM3P62310 102 aaKnown RBP-1.44□□□□□ -2.64
COPB1-212ENST00000534771 GNG5P63218 68 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 MT1LQ93083 61 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 LYRM2Q9NU23 88 aaPredicted RBP-1.44□□□□□ -2.64
COPB1-212ENST00000534771 ERG28Q9UKR5 140 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 PRNDQ9UKY0 176 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 ATP6V1DQ9Y5K8 247 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 NUBP2Q9Y5Y2 271 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 PCF11O94913 1555 aaKnown RBP-1.44□□□□□ -2.64
COPB1-212ENST00000534771 WDFY4Q6ZS81 3184 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 CEP350Q5VT06 3117 aa-1.44□□□□□ -2.64
COPB1-212ENST00000534771 VPS13CQ709C8 3753 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 TECPR2O15040 1411 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 TRDV1A0A1B0GX56 115 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 H0YJX3 145 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 J3KT08 172 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 SMR3BP02814 79 aaPredicted RBP-1.45□□□□□ -2.64
COPB1-212ENST00000534771 CSN2P05814 226 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 S100A6P06703 90 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 SMIM6P0DI80 62 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 SLC25A6P12236 298 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 SRP9P49458 86 aaKnown RBP-1.45□□□□□ -2.64
COPB1-212ENST00000534771 MRPS15P82914 257 aaKnown RBP-1.45□□□□□ -2.64
COPB1-212ENST00000534771 SPCS2Q15005 226 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 SPA17Q15506 151 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 SLC25A26Q70HW3 274 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 TEX29Q8N6K0 151 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 ATP6V1G3Q96LB4 118 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 C9orf16Q9BUW7 83 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 LAMTOR3Q9UHA4 124 aa-1.45□□□□□ -2.64
COPB1-212ENST00000534771 LRRC37A2A6NM11 1700 aa-1.46□□□□□ -2.64
COPB1-212ENST00000534771 CFAP54Q96N23 3096 aa-1.46□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms