RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 EBLN2Q6P2I7 272 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 CYP2G1PQ6ZSU1 146 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 Q6ZTI0 123 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 ERASQ7Z444 233 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 ATOH7Q8N100 152 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 RNF182Q8N6D2 247 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 LRTM2Q8N967 370 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 OR51G1Q8NGK1 321 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 OR10G8Q8NGN5 311 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 BAALCQ8WXS3 180 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 ACY3Q96HD9 319 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM56Q96MV1 263 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 YPEL4Q96NS1 127 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 PSMG3Q9BT73 122 aaPredicted RBP1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 CHAC1Q9BUX1 264 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 NPCDR1Q9BY65 106 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 PARD6GQ9BYG4 376 aaPredicted RBP1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 SLC25A39Q9BZJ4 359 aaPredicted RBP1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 SMDT1Q9H4I9 107 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 Q9HAA7 133 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 KCNIP2Q9NS61 270 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 NAT8BQ9UHF3 227 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 PXMP4Q9Y6I8 212 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 LY96Q9Y6Y9 160 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM56-RWDD3S4R434 201 aa1.92□□□□□ -2.1
CHMP4A-208ENST00000534106 TRAV8-2A0A0B4J237 113 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 PMS2P5A8MQ11 134 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 RBFOX2O43251 390 aaKnown RBP eCLIP1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 PDE6DO43924 150 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 COX7A2P2O60397 106 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 SERF1AO75920 110 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 CXorf1O96002 111 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 GCGP01275 180 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 INSP01308 110 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 IL4P05112 153 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 CRYGDP07320 174 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 OR10J4P0C629 311 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 GZMBP10144 247 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 RNASE2P10153 161 aaKnown RBP1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 RAB4AP20338 218 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 GATA2P23769 480 aaPredicted RBP1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 GCHFRP30047 84 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 TSPOP30536 169 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 ID1P41134 155 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 GNG4P50150 75 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 HSPE1P61604 102 aaKnown RBP1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 RHOBP62745 196 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 RANP62826 216 aaKnown RBP1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 SERF2P84101 59 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 RAB31Q13636 194 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 JOSD1Q15040 202 aaPredicted RBP1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 ATP6V1FQ16864 119 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 CENPWQ5EE01 88 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 SPATA31B1PQ5VZV4 182 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 ETFRF1Q6IPR1 90 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 Q6ZN92 141 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 Q6ZS49 121 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM144Q7Z5S9 345 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 OR8I2Q8N0Y5 310 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 TMEM256Q8N2U0 113 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 ZNF664Q8N3J9 261 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 LINC00612Q8N6U2 182 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 LYPD6BQ8NI32 183 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 BLNKQ8WV28 456 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 MBD3L1Q8WWY6 194 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 BORCS7Q96B45 105 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 SFRP2Q96HF1 295 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 SLC35E1Q96K37 410 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 DNAJC30Q96LL9 226 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 CIB3Q96Q77 187 aaPredicted RBP1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 PYGO2Q9BRQ0 406 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 C2orf88Q9BSF0 95 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 DERL1Q9BUN8 251 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 KRTAP4-3Q9BYR4 195 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 C11orf1Q9H5F2 150 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 PRNDQ9UKY0 176 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 TIMM9Q9Y5J7 89 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 ARL2-SNX15V9GYD0 113 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 SSPOA2VEC9 5147 aa1.91□□□□□ -2.1
CHMP4A-208ENST00000534106 TRBV24-1A0A075B6N3 115 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 TRAV9-2A0A087WT02 112 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 TRAV1-1A0A0B4J248 108 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 C20orf202A1L168 122 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 A8MTW9 85 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 HSBP1L1C9JCN9 74 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 PRSS46E5RG02 174 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 F2Z2F3 143 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 TMEM250H0YL14 139 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 H3BNG1 76 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 H3BTX0 84 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 PANO1I0J062 215 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 RS1O15537 224 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 IGHV3-30P01768 117 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 IGHV3-33P01772 117 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 APCSP02743 223 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 OR5G3P0C626 314 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 IGLC1P0CG04 106 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 IGHV3-30-3P0DP02 117 aa1.9□□□□□ -2.11
CHMP4A-208ENST00000534106 IGHV3-30-5P0DP03 117 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms