RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 NEXN-AS1Q8NBZ9 246 aa9.07□□□□□ -0.96
CAPN1-227ENST00000533909 SMDT1Q9H4I9 107 aa9.07□□□□□ -0.96
CAPN1-227ENST00000533909 Q9HAA7 133 aa9.07□□□□□ -0.96
CAPN1-227ENST00000533909 KIF25-AS1Q9Y6Z4 181 aa9.07□□□□□ -0.96
CAPN1-227ENST00000533909 DNAH17Q9UFH2 4485 aa9.07□□□□□ -0.96
CAPN1-227ENST00000533909 A0A087WX48 190 aa9.06□□□□□ -0.96
CAPN1-227ENST00000533909 ADIRFQ15847 76 aa9.06□□□□□ -0.96
CAPN1-227ENST00000533909 PGLYRP4Q96LB8 373 aa9.06□□□□□ -0.96
CAPN1-227ENST00000533909 OSTCQ9NRP0 149 aa9.06□□□□□ -0.96
CAPN1-227ENST00000533909 TMEM262E9PQX1 116 aa9.05□□□□□ -0.96
CAPN1-227ENST00000533909 TMEM97Q5BJF2 176 aa9.05□□□□□ -0.96
CAPN1-227ENST00000533909 SUMO4Q6EEV6 95 aa9.05□□□□□ -0.96
CAPN1-227ENST00000533909 DAZ4Q86SG3 579 aaKnown RBP9.05□□□□□ -0.96
CAPN1-227ENST00000533909 GTSF1Q8WW33 167 aa9.05□□□□□ -0.96
CAPN1-227ENST00000533909 DNAJC30Q96LL9 226 aa9.05□□□□□ -0.96
CAPN1-227ENST00000533909 CNFNQ9BYD5 112 aa9.05□□□□□ -0.96
CAPN1-227ENST00000533909 DAZ3Q9NR90 486 aaKnown RBP9.05□□□□□ -0.96
CAPN1-227ENST00000533909 NAT8Q9UHE5 227 aa9.05□□□□□ -0.96
CAPN1-227ENST00000533909 IBA57-AS1B1ANH7 110 aa9.04□□□□□ -0.96
CAPN1-227ENST00000533909 M0QY20 66 aa9.04□□□□□ -0.96
CAPN1-227ENST00000533909 SRSF3P84103 164 aaKnown RBP9.04□□□□□ -0.96
CAPN1-227ENST00000533909 RASL11AQ6T310 242 aa9.04□□□□□ -0.96
CAPN1-227ENST00000533909 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
CAPN1-227ENST00000533909 CHCHD5Q9BSY4 110 aa9.04□□□□□ -0.96
CAPN1-227ENST00000533909 TRBV6-8A0A0A6YYG3 113 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 C16orf90A8MZG2 172 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 C9JQL5 133 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 PKIAP61925 76 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 LAGE3Q14657 143 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 ELOBQ15370 118 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 Q6ZRN7 208 aaPredicted RBP9.03□□□□□ -0.96
CAPN1-227ENST00000533909 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 ISOC2Q96AB3 205 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 TM2D2Q9BX73 214 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 GFRA4Q9GZZ7 299 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 FAT2Q9NYQ8 4349 aa9.03□□□□□ -0.96
CAPN1-227ENST00000533909 TRAV8-3A0A0A6YYJ7 113 aa9.02□□□□□ -0.97
CAPN1-227ENST00000533909 A0A1B0GUT8 65 aa9.02□□□□□ -0.97
CAPN1-227ENST00000533909 FAM231BA6NCW3 169 aa9.02□□□□□ -0.97
CAPN1-227ENST00000533909 HIGD1CA8MV81 97 aa9.02□□□□□ -0.97
CAPN1-227ENST00000533909 RPL23P62829 140 aaKnown RBP9.02□□□□□ -0.97
CAPN1-227ENST00000533909 NIT1Q86X76 327 aa9.02□□□□□ -0.97
CAPN1-227ENST00000533909 NIT2Q9NQR4 276 aa9.02□□□□□ -0.97
CAPN1-227ENST00000533909 TRBV25-1A0A075B6N4 114 aa9.01□□□□□ -0.97
CAPN1-227ENST00000533909 FOXA3P55318 350 aaPredicted RBP9.01□□□□□ -0.97
CAPN1-227ENST00000533909 Q8N3U1 123 aa9.01□□□□□ -0.97
CAPN1-227ENST00000533909 RMI2Q96E14 147 aa9.01□□□□□ -0.97
CAPN1-227ENST00000533909 CHCHD7Q9BUK0 85 aa9.01□□□□□ -0.97
CAPN1-227ENST00000533909 RIGQ13278 110 aa9□□□□□ -0.97
CAPN1-227ENST00000533909 NAT8BQ9UHF3 227 aa9□□□□□ -0.97
CAPN1-227ENST00000533909 KLK12Q9UKR0 248 aa9□□□□□ -0.97
CAPN1-227ENST00000533909 V9GYV3 84 aa9□□□□□ -0.97
CAPN1-227ENST00000533909 A0A087WTM6 91 aa8.99□□□□□ -0.97
CAPN1-227ENST00000533909 TRAV26-2A0A0B4J265 109 aa8.99□□□□□ -0.97
CAPN1-227ENST00000533909 IGHV1-24A0A0C4DH33 117 aa8.99□□□□□ -0.97
CAPN1-227ENST00000533909 CRPP02741 224 aa8.99□□□□□ -0.97
CAPN1-227ENST00000533909 FRZBQ92765 325 aa8.99□□□□□ -0.97
CAPN1-227ENST00000533909 UBE2WQ96B02 151 aa8.99□□□□□ -0.97
CAPN1-227ENST00000533909 PKD1P98161 4303 aa8.99□□□□□ -0.97
CAPN1-227ENST00000533909 COTL1Q14019 142 aa8.98□□□□□ -0.97
CAPN1-227ENST00000533909 GATD1Q8NB37 220 aa8.98□□□□□ -0.97
CAPN1-227ENST00000533909 COX11Q9Y6N1 276 aa8.98□□□□□ -0.97
CAPN1-227ENST00000533909 UBE2L6O14933 153 aa8.97□□□□□ -0.97
CAPN1-227ENST00000533909 ANGP03950 147 aaKnown RBP8.97□□□□□ -0.97
CAPN1-227ENST00000533909 GAGE6Q13070 117 aa8.97□□□□□ -0.97
CAPN1-227ENST00000533909 CLLU1Q5K131 121 aa8.97□□□□□ -0.97
CAPN1-227ENST00000533909 NUP35Q8NFH5 326 aa8.97□□□□□ -0.97
CAPN1-227ENST00000533909 TMEM243Q9BU79 118 aa8.97□□□□□ -0.97
CAPN1-227ENST00000533909 TMEM191AQ9H0A3 160 aa8.97□□□□□ -0.97
CAPN1-227ENST00000533909 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
CAPN1-227ENST00000533909 PKHD1P08F94 4074 aa8.96□□□□□ -0.97
CAPN1-227ENST00000533909 IGKV2D-24A0A075B6R9 120 aa8.96□□□□□ -0.98
CAPN1-227ENST00000533909 AMTP48728 403 aa8.96□□□□□ -0.98
CAPN1-227ENST00000533909 KRTAP10-2P60368 255 aa8.96□□□□□ -0.98
CAPN1-227ENST00000533909 Q0VG73 95 aa8.96□□□□□ -0.98
CAPN1-227ENST00000533909 IQCJQ1A5X6 159 aa8.96□□□□□ -0.98
CAPN1-227ENST00000533909 MPV17L2Q567V2 206 aa8.96□□□□□ -0.98
CAPN1-227ENST00000533909 NTM-AS1Q6ZSK4 140 aa8.96□□□□□ -0.98
CAPN1-227ENST00000533909 CDPF1Q6NVV7 123 aa8.95□□□□□ -0.98
CAPN1-227ENST00000533909 RPL39LQ96EH5 51 aaKnown RBP8.95□□□□□ -0.98
CAPN1-227ENST00000533909 A0A1B0GW15 77 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 SMIM27A0A1W2PRY6 76 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 PPP1R2P9O14990 202 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 S100A8P05109 93 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 CAMPP49913 170 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 PNRC1Q12796 327 aaPredicted RBP8.94□□□□□ -0.98
CAPN1-227ENST00000533909 ATRAIDQ6UW56 229 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 Q8N976 141 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 DEFB104AQ8WTQ1 72 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 MRAP2Q96G30 205 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 C1orf43Q9BWL3 253 aa8.94□□□□□ -0.98
CAPN1-227ENST00000533909 SDHAF1A6NFY7 115 aa8.93□□□□□ -0.98
CAPN1-227ENST00000533909 PMCHP20382 165 aa8.93□□□□□ -0.98
CAPN1-227ENST00000533909 RBX1P62877 108 aa8.93□□□□□ -0.98
CAPN1-227ENST00000533909 AMN1Q8IY45 258 aa8.93□□□□□ -0.98
CAPN1-227ENST00000533909 ST20Q9HBF5 79 aa8.93□□□□□ -0.98
CAPN1-227ENST00000533909 DNAH11Q96DT5 4516 aa8.92□□□□□ -0.98
CAPN1-227ENST00000533909 PPP1R17O96001 155 aa8.92□□□□□ -0.98
CAPN1-227ENST00000533909 APCSP02743 223 aa8.92□□□□□ -0.98
CAPN1-227ENST00000533909 MT-ND4LP03901 98 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms