RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 PRM2P04554 102 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 SLURP1P55000 103 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 C12orf74Q32Q52 190 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 WFDC12Q8WWY7 111 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 TMEM141Q96I45 108 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 DYNC2H1Q8NCM8 4307 aaKnown RBP5.16□□□□□ -1.58
RNPC3-209ENST00000533834 MED13LQ71F56 2210 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 IGLV4-3A0A075B6K6 122 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 LINC00694P0DN24 101 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 SYNJ2BPP57105 145 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 PROK1P58294 105 aa5.16□□□□□ -1.58
RNPC3-209ENST00000533834 VWFP04275 2813 aa5.15□□□□□ -1.58
RNPC3-209ENST00000533834 IGLV5-45A0A087WSX0 123 aa5.15□□□□□ -1.58
RNPC3-209ENST00000533834 RHOHQ15669 191 aa5.15□□□□□ -1.58
RNPC3-209ENST00000533834 C20orf203Q8NBC4 194 aa5.15□□□□□ -1.58
RNPC3-209ENST00000533834 PRADC1Q9BSG0 188 aa5.15□□□□□ -1.58
RNPC3-209ENST00000533834 TMEM160Q9NX00 188 aa5.15□□□□□ -1.58
RNPC3-209ENST00000533834 TP53TG1Q9Y2A0 90 aa5.15□□□□□ -1.58
RNPC3-209ENST00000533834 PHLDA3Q9Y5J5 127 aa5.15□□□□□ -1.58
RNPC3-209ENST00000533834 A0A087WWL8 130 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 H3BUT2 72 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 J3KRW8 73 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 PPP1R17O96001 155 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 ZNF688P0C7X2 276 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 MRPS36P82909 103 aaKnown RBP5.15□□□□□ -1.59
RNPC3-209ENST00000533834 TMEM86BQ8N661 226 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.15□□□□□ -1.59
RNPC3-209ENST00000533834 NAA38Q9BRA0 125 aaKnown RBP5.15□□□□□ -1.59
RNPC3-209ENST00000533834 MAP6D1Q9H9H5 199 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 SDHAF1A6NFY7 115 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 SLC25A29Q8N8R3 303 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 SCGB3A1Q96QR1 104 aa5.15□□□□□ -1.59
RNPC3-209ENST00000533834 CSMD3Q7Z407 3707 aa5.14□□□□□ -1.59
RNPC3-209ENST00000533834 ZNF22P17026 224 aaPredicted RBP5.14□□□□□ -1.59
RNPC3-209ENST00000533834 SPINK13Q1W4C9 94 aa5.14□□□□□ -1.59
RNPC3-209ENST00000533834 DEFB114Q30KQ6 69 aa5.14□□□□□ -1.59
RNPC3-209ENST00000533834 ODF3L2Q3SX64 289 aa5.14□□□□□ -1.59
RNPC3-209ENST00000533834 CFAP126Q5VTH2 177 aa5.14□□□□□ -1.59
RNPC3-209ENST00000533834 CSNK1G2-AS1Q8NCQ2 148 aa5.14□□□□□ -1.59
RNPC3-209ENST00000533834 OPRPNQ99935 248 aaPredicted RBP5.14□□□□□ -1.59
RNPC3-209ENST00000533834 A6NDN8 102 aa5.14□□□□□ -1.59
RNPC3-209ENST00000533834 PMVKQ15126 192 aa5.14□□□□□ -1.59
RNPC3-209ENST00000533834 LINC01549A6NIU2 74 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 VCYO14598 125 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 CRYBA4P53673 196 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 DEFB136Q30KP8 78 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 HIST2H2BDQ6DRA6 164 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 Q6ZSV7 163 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 TMEM61Q8N0U2 210 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 C1orf158Q8N1D5 194 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 C10orf126Q8N4M7 172 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 RAX2Q96IS3 184 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 RS1O15537 224 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 PRSS1P07477 247 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 ID1P41134 155 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 RRN3P1Q2M238 152 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 KLHL30-AS1Q8NEE0 82 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 C16orf95Q9H693 158 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 UBE2D4Q9Y2X8 147 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 TIMM8BQ9Y5J9 83 aaPredicted RBP5.13□□□□□ -1.59
RNPC3-209ENST00000533834 J3QL48 77 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 LCE3BQ5TA77 95 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 SAMD5Q5TGI4 173 aa5.13□□□□□ -1.59
RNPC3-209ENST00000533834 TSPAN13O95857 204 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 CFC1BP0CG36 223 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 CFC1P0CG37 223 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 FAM159AQ6UWV7 190 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 TRPT1Q86TN4 253 aaKnown RBP5.12□□□□□ -1.59
RNPC3-209ENST00000533834 TPRP12270 2363 aaKnown RBP5.12□□□□□ -1.59
RNPC3-209ENST00000533834 M0R2P5 195 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 OR4C5Q8NGB2 326 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 DUX5Q96PT3 197 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 SPTA1P02549 2419 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 KNCNA6PVL3 124 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 SMIM13P0DJ93 91 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 KRTAP10-3P60369 221 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 VAMP3Q15836 100 aa5.12□□□□□ -1.59
RNPC3-209ENST00000533834 SPTAN1Q13813 2472 aaKnown RBP5.12□□□□□ -1.59
RNPC3-209ENST00000533834 AKAP6Q13023 2319 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 TGFAP01135 160 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 TMEM263Q8WUH6 116 aaKnown RBP5.11□□□□□ -1.59
RNPC3-209ENST00000533834 CYSLTR1Q9Y271 337 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 RHODO00212 210 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 AZU1P20160 251 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 NDUFA11Q86Y39 141 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 NBASA2RRP1 2371 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 IGKV3-7A0A075B6H7 116 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 M0QXV9 152 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 IGHV3-53P01767 116 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 SMIM15Q7Z3B0 74 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 ZNF462Q96JM2 2506 aa5.11□□□□□ -1.59
RNPC3-209ENST00000533834 MGPP08493 103 aa5.1□□□□□ -1.59
RNPC3-209ENST00000533834 NTM-AS1Q6ZSK4 140 aa5.1□□□□□ -1.59
RNPC3-209ENST00000533834 DNAJC9-AS1A6NH13 148 aa5.1□□□□□ -1.59
RNPC3-209ENST00000533834 I3L3M4 83 aa5.1□□□□□ -1.59
RNPC3-209ENST00000533834 LEPROTO15243 131 aa5.1□□□□□ -1.59
RNPC3-209ENST00000533834 SNRPD3P62318 126 aaKnown RBP5.1□□□□□ -1.59
RNPC3-209ENST00000533834 GAGE10A6NGK3 116 aa5.1□□□□□ -1.59
RNPC3-209ENST00000533834 IGLV5-39A0A0G2JS06 123 aa5.09□□□□□ -1.59
RNPC3-209ENST00000533834 GCSHP23434 173 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms