RNA–Protein interactions for RNA: ENST00000533572.5

CTSB-229, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-229ENST00000533572 DNAJC30Q96LL9 226 aa11.98□□□□□ -0.49
CTSB-229ENST00000533572 PPP1R17O96001 155 aa11.97□□□□□ -0.49
CTSB-229ENST00000533572 GYPEP15421 78 aa11.97□□□□□ -0.49
CTSB-229ENST00000533572 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
CTSB-229ENST00000533572 FAM104BQ5XKR9 115 aa11.97□□□□□ -0.49
CTSB-229ENST00000533572 ATRAIDQ6UW56 229 aa11.97□□□□□ -0.49
CTSB-229ENST00000533572 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.97□□□□□ -0.49
CTSB-229ENST00000533572 RPL36ALQ969Q0 106 aaKnown RBP11.97□□□□□ -0.49
CTSB-229ENST00000533572 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.49
CTSB-229ENST00000533572 RAB4AP20338 218 aa11.96□□□□□ -0.49
CTSB-229ENST00000533572 SRIP30626 198 aa11.96□□□□□ -0.49
CTSB-229ENST00000533572 SUMO4Q6EEV6 95 aa11.96□□□□□ -0.49
CTSB-229ENST00000533572 Q6ZSN1 163 aa11.96□□□□□ -0.49
CTSB-229ENST00000533572 AMN1Q8IY45 258 aa11.96□□□□□ -0.49
CTSB-229ENST00000533572 DNAH6Q9C0G6 4158 aa11.96□□□□□ -0.5
CTSB-229ENST00000533572 M0QY20 66 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 ATP6V1G1O75348 118 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 HLA-DQA1P01909 254 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 PPBPP02775 128 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 MT-ND6P03923 174 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 CCL18P55774 89 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 ELOBQ15370 118 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 NEGR1Q7Z3B1 354 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 NIT2Q9NQR4 276 aa11.95□□□□□ -0.5
CTSB-229ENST00000533572 TRBV7-3A0A075B6L6 115 aa11.94□□□□□ -0.5
CTSB-229ENST00000533572 A0A096LPF7 62 aa11.94□□□□□ -0.5
CTSB-229ENST00000533572 RNF185Q96GF1 192 aa11.94□□□□□ -0.5
CTSB-229ENST00000533572 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
CTSB-229ENST00000533572 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
CTSB-229ENST00000533572 NACAE9PAV3 2078 aa11.94□□□□□ -0.5
CTSB-229ENST00000533572 IGLV2-18A0A075B6J9 118 aa11.93□□□□□ -0.5
CTSB-229ENST00000533572 M0R2N4 97 aa11.93□□□□□ -0.5
CTSB-229ENST00000533572 MRPL51Q4U2R6 128 aaKnown RBP11.92□□□□□ -0.5
CTSB-229ENST00000533572 NEXN-AS1Q8NBZ9 246 aa11.92□□□□□ -0.5
CTSB-229ENST00000533572 ZNRF2Q8NHG8 242 aa11.92□□□□□ -0.5
CTSB-229ENST00000533572 GAGE12JA6NER3 117 aa11.91□□□□□ -0.5
CTSB-229ENST00000533572 CKS2P33552 79 aa11.91□□□□□ -0.5
CTSB-229ENST00000533572 GAGE1Q13065 139 aa11.91□□□□□ -0.5
CTSB-229ENST00000533572 GAGE4Q13068 117 aa11.91□□□□□ -0.5
CTSB-229ENST00000533572 GAGE5Q13069 117 aa11.91□□□□□ -0.5
CTSB-229ENST00000533572 GAGE13Q4V321 117 aa11.91□□□□□ -0.5
CTSB-229ENST00000533572 TMEM136Q6ZRR5 245 aa11.91□□□□□ -0.5
CTSB-229ENST00000533572 ATP6V0E2Q8NHE4 81 aa11.91□□□□□ -0.5
CTSB-229ENST00000533572 LOC100131303A0A0U1RQF7 123 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 PHOX2AO14813 284 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 LINC00694P0DN24 101 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 TIRAPP58753 221 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 TMEM97Q5BJF2 176 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 OR10J3Q5JRS4 329 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 DAZ4Q86SG3 579 aaKnown RBP11.9□□□□□ -0.5
CTSB-229ENST00000533572 CBLN2Q8IUK8 224 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 ORMDL3Q8N138 153 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 DAZ3Q9NR90 486 aaKnown RBP11.9□□□□□ -0.5
CTSB-229ENST00000533572 LAMTOR2Q9Y2Q5 125 aa11.9□□□□□ -0.5
CTSB-229ENST00000533572 TGIF2-C20orf24A0A0A6YYL0 155 aa11.89□□□□□ -0.51
CTSB-229ENST00000533572 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
CTSB-229ENST00000533572 TRBV6-5A0A0K0K1A5 114 aa11.89□□□□□ -0.51
CTSB-229ENST00000533572 UBE2D3P61077 147 aa11.89□□□□□ -0.51
CTSB-229ENST00000533572 UBE2D2P62837 147 aa11.89□□□□□ -0.51
CTSB-229ENST00000533572 YPEL4Q96NS1 127 aa11.89□□□□□ -0.51
CTSB-229ENST00000533572 APCSP02743 223 aa11.88□□□□□ -0.51
CTSB-229ENST00000533572 LINC00336Q6ZUF6 198 aa11.88□□□□□ -0.51
CTSB-229ENST00000533572 GTSF1LQ9H1H1 148 aa11.88□□□□□ -0.51
CTSB-229ENST00000533572 ST20Q9HBF5 79 aa11.88□□□□□ -0.51
CTSB-229ENST00000533572 LINC00588Q9Y4M8 146 aa11.88□□□□□ -0.51
CTSB-229ENST00000533572 C20orf78Q9BR46 151 aa11.87□□□□□ -0.51
CTSB-229ENST00000533572 D6R8Y8 96 aa11.86□□□□□ -0.51
CTSB-229ENST00000533572 LYPD5Q6UWN5 251 aa11.86□□□□□ -0.51
CTSB-229ENST00000533572 TRAPPC1Q9Y5R8 145 aa11.86□□□□□ -0.51
CTSB-229ENST00000533572 DNAH10Q8IVF4 4471 aa11.85□□□□□ -0.51
CTSB-229ENST00000533572 RPL39LQ96EH5 51 aaKnown RBP11.85□□□□□ -0.51
CTSB-229ENST00000533572 PRELID3AQ96N28 172 aa11.85□□□□□ -0.51
CTSB-229ENST00000533572 MRPL18Q9H0U6 180 aaKnown RBP11.85□□□□□ -0.51
CTSB-229ENST00000533572 Q9UF83 564 aa11.85□□□□□ -0.51
CTSB-229ENST00000533572 SDHAF1A6NFY7 115 aa11.84□□□□□ -0.51
CTSB-229ENST00000533572 TCAPO15273 167 aa11.84□□□□□ -0.51
CTSB-229ENST00000533572 TNFRSF6BO95407 300 aa11.84□□□□□ -0.51
CTSB-229ENST00000533572 NCR2O95944 276 aa11.84□□□□□ -0.51
CTSB-229ENST00000533572 SUMO2P61956 95 aaKnown RBP11.84□□□□□ -0.51
CTSB-229ENST00000533572 RPL32P62910 135 aaKnown RBP11.84□□□□□ -0.51
CTSB-229ENST00000533572 FABP9Q0Z7S8 132 aa11.84□□□□□ -0.51
CTSB-229ENST00000533572 ESRGQ1W209 222 aa11.84□□□□□ -0.51
CTSB-229ENST00000533572 Q6ZR54 194 aa11.84□□□□□ -0.51
CTSB-229ENST00000533572 NRACQ8N912 160 aa11.84□□□□□ -0.51
CTSB-229ENST00000533572 NBDYA0A0U1RRE5 68 aa11.83□□□□□ -0.52
CTSB-229ENST00000533572 SMKR1H3BMG3 65 aa11.83□□□□□ -0.52
CTSB-229ENST00000533572 VCYO14598 125 aa11.83□□□□□ -0.52
CTSB-229ENST00000533572 RPS10P46783 165 aaKnown RBP11.83□□□□□ -0.52
CTSB-229ENST00000533572 LELP1Q5T871 98 aa11.83□□□□□ -0.52
CTSB-229ENST00000533572 C1orf134Q5TEV5 83 aa11.83□□□□□ -0.52
CTSB-229ENST00000533572 UPK3BQ9BT76 320 aa11.83□□□□□ -0.52
CTSB-229ENST00000533572 MRPS16Q9Y3D3 137 aaKnown RBP11.83□□□□□ -0.52
CTSB-229ENST00000533572 FRAS1Q86XX4 4008 aa11.82□□□□□ -0.52
CTSB-229ENST00000533572 TRAV8-6A0A0B4J262 113 aa11.82□□□□□ -0.52
CTSB-229ENST00000533572 PRSS47A8MTI9 375 aa11.82□□□□□ -0.52
CTSB-229ENST00000533572 I3L3M4 83 aa11.82□□□□□ -0.52
CTSB-229ENST00000533572 POLR2KP53803 58 aaKnown RBP11.82□□□□□ -0.52
CTSB-229ENST00000533572 COTL1Q14019 142 aa11.82□□□□□ -0.52
CTSB-229ENST00000533572 TMEM70Q9BUB7 260 aa11.82□□□□□ -0.52
CTSB-229ENST00000533572 Q9H8V8 135 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms