RNA–Protein interactions for RNA: ENST00000533492.1

CPSF1-211, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-211ENST00000533492 TCTE3Q8IZS6 198 aa10.21□□□□□ -0.77
CPSF1-211ENST00000533492 OR2D3Q8NGH3 330 aa10.21□□□□□ -0.77
CPSF1-211ENST00000533492 DNAJC30Q96LL9 226 aa10.21□□□□□ -0.77
CPSF1-211ENST00000533492 AP1S3Q96PC3 154 aa10.21□□□□□ -0.77
CPSF1-211ENST00000533492 RAB19A4D1S5 217 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 C1QBP02746 253 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 GZMBP10144 247 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 MEF2BQ02080 365 aaPredicted RBP10.2□□□□□ -0.78
CPSF1-211ENST00000533492 TMEM97Q5BJF2 176 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 SLC51BQ86UW2 128 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 Q8N976 141 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 FER1L6-AS1Q8NA97 138 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 CHCHD5Q9BSY4 110 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 MED9Q9NWA0 146 aa10.2□□□□□ -0.78
CPSF1-211ENST00000533492 XKRY2A2RUG3 117 aa10.19□□□□□ -0.78
CPSF1-211ENST00000533492 IGLV2-8P01709 118 aa10.19□□□□□ -0.78
CPSF1-211ENST00000533492 CRPP02741 224 aa10.19□□□□□ -0.78
CPSF1-211ENST00000533492 PKIAP61925 76 aa10.19□□□□□ -0.78
CPSF1-211ENST00000533492 SMIM12Q96EX1 92 aa10.19□□□□□ -0.78
CPSF1-211ENST00000533492 BIN3Q9NQY0 253 aa10.19□□□□□ -0.78
CPSF1-211ENST00000533492 FAM30AQ9NZY2 134 aa10.19□□□□□ -0.78
CPSF1-211ENST00000533492 KIF25-AS1Q9Y6Z4 181 aa10.19□□□□□ -0.78
CPSF1-211ENST00000533492 P01737 135 aa10.18□□□□□ -0.78
CPSF1-211ENST00000533492 MGPP08493 103 aa10.18□□□□□ -0.78
CPSF1-211ENST00000533492 CACNG7P62955 275 aa10.18□□□□□ -0.78
CPSF1-211ENST00000533492 C15orf54Q8N8G6 183 aa10.18□□□□□ -0.78
CPSF1-211ENST00000533492 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
CPSF1-211ENST00000533492 C19orf71A6NCJ1 209 aa10.17□□□□□ -0.78
CPSF1-211ENST00000533492 H7C1H1 209 aa10.17□□□□□ -0.78
CPSF1-211ENST00000533492 ANGP03950 147 aaKnown RBP10.17□□□□□ -0.78
CPSF1-211ENST00000533492 IGLC6P0CF74 106 aa10.17□□□□□ -0.78
CPSF1-211ENST00000533492 BCL2P10415 239 aa10.17□□□□□ -0.78
CPSF1-211ENST00000533492 MPV17L2Q567V2 206 aa10.17□□□□□ -0.78
CPSF1-211ENST00000533492 VAX2Q9UIW0 290 aa10.17□□□□□ -0.78
CPSF1-211ENST00000533492 F2Z2F3 143 aa10.16□□□□□ -0.78
CPSF1-211ENST00000533492 TAGLN2P37802 199 aaKnown RBP10.16□□□□□ -0.78
CPSF1-211ENST00000533492 ATRAIDQ6UW56 229 aa10.16□□□□□ -0.78
CPSF1-211ENST00000533492 FAT1Q14517 4588 aa10.15□□□□□ -0.78
CPSF1-211ENST00000533492 TRBV25-1A0A075B6N4 114 aa10.15□□□□□ -0.78
CPSF1-211ENST00000533492 ENHOQ6UWT2 76 aa10.15□□□□□ -0.78
CPSF1-211ENST00000533492 TRBV20OR9-2A0A075B6H5 130 aa10.14□□□□□ -0.79
CPSF1-211ENST00000533492 M0QY20 66 aa10.14□□□□□ -0.79
CPSF1-211ENST00000533492 TRGC1P0CF51 173 aa10.14□□□□□ -0.79
CPSF1-211ENST00000533492 GAGE6Q13070 117 aa10.14□□□□□ -0.79
CPSF1-211ENST00000533492 LINC01620Q4KN68 170 aa10.14□□□□□ -0.79
CPSF1-211ENST00000533492 C14orf177Q52M58 125 aa10.14□□□□□ -0.79
CPSF1-211ENST00000533492 LYZL1Q6UWQ5 148 aa10.14□□□□□ -0.79
CPSF1-211ENST00000533492 NTM-AS1Q6ZSK4 140 aa10.14□□□□□ -0.79
CPSF1-211ENST00000533492 MIAQ16674 131 aa10.13□□□□□ -0.79
CPSF1-211ENST00000533492 SUMO4Q6EEV6 95 aa10.13□□□□□ -0.79
CPSF1-211ENST00000533492 NUDT10Q8NFP7 164 aa10.13□□□□□ -0.79
CPSF1-211ENST00000533492 NUDT11Q96G61 164 aa10.13□□□□□ -0.79
CPSF1-211ENST00000533492 IGHV1-24A0A0C4DH33 117 aa10.12□□□□□ -0.79
CPSF1-211ENST00000533492 NTF3P20783 257 aa10.12□□□□□ -0.79
CPSF1-211ENST00000533492 RBX1P62877 108 aa10.12□□□□□ -0.79
CPSF1-211ENST00000533492 Q6ZNX1 250 aa10.12□□□□□ -0.79
CPSF1-211ENST00000533492 Q6ZSA8 131 aa10.12□□□□□ -0.79
CPSF1-211ENST00000533492 C9orf62Q8N4C0 152 aa10.12□□□□□ -0.79
CPSF1-211ENST00000533492 DPH3P1Q9H4G8 78 aa10.12□□□□□ -0.79
CPSF1-211ENST00000533492 SRRM2Q9UQ35 2752 aaKnown RBP10.12□□□□□ -0.79
CPSF1-211ENST00000533492 HLA-DQA1P01909 254 aa10.11□□□□□ -0.79
CPSF1-211ENST00000533492 NKX2-5P52952 324 aaPredicted RBP10.11□□□□□ -0.79
CPSF1-211ENST00000533492 IQCJQ1A5X6 159 aa10.11□□□□□ -0.79
CPSF1-211ENST00000533492 WDR73Q6P4I2 378 aa10.11□□□□□ -0.79
CPSF1-211ENST00000533492 RASL11AQ6T310 242 aa10.11□□□□□ -0.79
CPSF1-211ENST00000533492 AKAP14Q86UN6 197 aa10.11□□□□□ -0.79
CPSF1-211ENST00000533492 PLA2G1BP04054 148 aaKnown RBP10.1□□□□□ -0.79
CPSF1-211ENST00000533492 BLOC1S1P78537 153 aa10.1□□□□□ -0.79
CPSF1-211ENST00000533492 TWIST1Q15672 202 aa10.1□□□□□ -0.79
CPSF1-211ENST00000533492 CLPSL2Q6UWE3 100 aa10.1□□□□□ -0.79
CPSF1-211ENST00000533492 LINC00269Q8N2A0 174 aa10.1□□□□□ -0.79
CPSF1-211ENST00000533492 OCC1Q8TAD7 63 aa10.1□□□□□ -0.79
CPSF1-211ENST00000533492 NIT2Q9NQR4 276 aa10.1□□□□□ -0.79
CPSF1-211ENST00000533492 hCG_2014768A0A024R1R8 64 aa10.09□□□□□ -0.79
CPSF1-211ENST00000533492 RNASE7Q9H1E1 156 aaKnown RBP10.09□□□□□ -0.79
CPSF1-211ENST00000533492 RPP21Q9H633 154 aaKnown RBP10.09□□□□□ -0.79
CPSF1-211ENST00000533492 FLG2Q5D862 2391 aaPredicted RBP10.08□□□□□ -0.8
CPSF1-211ENST00000533492 USP17L23D6RBM5 183 aa10.08□□□□□ -0.8
CPSF1-211ENST00000533492 CTRLP40313 264 aa10.08□□□□□ -0.8
CPSF1-211ENST00000533492 ALKAL2Q6UX46 152 aa10.08□□□□□ -0.8
CPSF1-211ENST00000533492 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
CPSF1-211ENST00000533492 TMEM243Q9BU79 118 aa10.08□□□□□ -0.8
CPSF1-211ENST00000533492 PRR34Q9NV39 138 aa10.08□□□□□ -0.8
CPSF1-211ENST00000533492 VPS13BQ7Z7G8 4022 aa10.08□□□□□ -0.8
CPSF1-211ENST00000533492 K7EN84 100 aa10.07□□□□□ -0.8
CPSF1-211ENST00000533492 SCXQ7RTU7 201 aa10.07□□□□□ -0.8
CPSF1-211ENST00000533492 CHAC1Q9BUX1 264 aa10.07□□□□□ -0.8
CPSF1-211ENST00000533492 DNAH8Q96JB1 4490 aa10.06□□□□□ -0.8
CPSF1-211ENST00000533492 TMEM250H0YL14 139 aa10.06□□□□□ -0.8
CPSF1-211ENST00000533492 UBE2L6O14933 153 aa10.06□□□□□ -0.8
CPSF1-211ENST00000533492 REG3AQ06141 175 aa10.06□□□□□ -0.8
CPSF1-211ENST00000533492 COTL1Q14019 142 aa10.06□□□□□ -0.8
CPSF1-211ENST00000533492 SMIM15Q7Z3B0 74 aa10.06□□□□□ -0.8
CPSF1-211ENST00000533492 DEFB104AQ8WTQ1 72 aa10.06□□□□□ -0.8
CPSF1-211ENST00000533492 DMBT1Q9UGM3 2413 aaPredicted RBP10.06□□□□□ -0.8
CPSF1-211ENST00000533492 GATCO43716 136 aaKnown RBP10.05□□□□□ -0.8
CPSF1-211ENST00000533492 CEBPGP53567 150 aa10.05□□□□□ -0.8
CPSF1-211ENST00000533492 PGLYRP4Q96LB8 373 aa10.05□□□□□ -0.8
CPSF1-211ENST00000533492 CNFNQ9BYD5 112 aa10.05□□□□□ -0.8
CPSF1-211ENST00000533492 IGLV10-54A0A075B6I4 117 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms