RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 A4D1N5 150 aa12.28□□□□□ -0.44
CTSB-228ENST00000533455 I3L3M4 83 aa12.28□□□□□ -0.44
CTSB-228ENST00000533455 EIF4EBP3O60516 100 aaPredicted RBP12.28□□□□□ -0.44
CTSB-228ENST00000533455 CKS1BP61024 79 aa12.28□□□□□ -0.44
CTSB-228ENST00000533455 SNRPD3P62318 126 aaKnown RBP12.28□□□□□ -0.44
CTSB-228ENST00000533455 RNF152Q8N8N0 203 aa12.28□□□□□ -0.44
CTSB-228ENST00000533455 TMEM263Q8WUH6 116 aaKnown RBP12.28□□□□□ -0.44
CTSB-228ENST00000533455 IGHV3-33P01772 117 aa12.28□□□□□ -0.44
CTSB-228ENST00000533455 Q6ZUT4 128 aa12.28□□□□□ -0.44
CTSB-228ENST00000533455 EDA2RQ9HAV5 297 aa12.28□□□□□ -0.44
CTSB-228ENST00000533455 AKAP6Q13023 2319 aa12.27□□□□□ -0.44
CTSB-228ENST00000533455 IGLV4-3A0A075B6K6 122 aa12.27□□□□□ -0.44
CTSB-228ENST00000533455 ANKRD29Q8N6D5 301 aa12.27□□□□□ -0.44
CTSB-228ENST00000533455 PRORYQ9H606 182 aa12.27□□□□□ -0.44
CTSB-228ENST00000533455 ZFHX3Q15911 3703 aa12.27□□□□□ -0.45
CTSB-228ENST00000533455 TMEM89A2RUT3 159 aa12.27□□□□□ -0.45
CTSB-228ENST00000533455 MSMBP08118 114 aa12.27□□□□□ -0.45
CTSB-228ENST00000533455 SCGB1C2P0DMR2 95 aa12.27□□□□□ -0.45
CTSB-228ENST00000533455 M0R2P5 195 aa12.26□□□□□ -0.45
CTSB-228ENST00000533455 SPINK8P0C7L1 97 aa12.26□□□□□ -0.45
CTSB-228ENST00000533455 TMEM95Q3KNT9 176 aa12.26□□□□□ -0.45
CTSB-228ENST00000533455 CCL19Q99731 98 aa12.26□□□□□ -0.45
CTSB-228ENST00000533455 TRGV11A0A075B6L2 103 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 IGKV3-20P01619 116 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 MT-ATP8P03928 68 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 XGP55808 180 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
CTSB-228ENST00000533455 A0A0J9YXV3 536 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 SPINK13Q1W4C9 94 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 MUSTN1Q8IVN3 82 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 ERG28Q9UKR5 140 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 PYGO1Q9Y3Y4 419 aa12.25□□□□□ -0.45
CTSB-228ENST00000533455 IGHV4-30-2A0A087WSY4 118 aa12.24□□□□□ -0.45
CTSB-228ENST00000533455 TRAV2A0A0B4J234 112 aa12.24□□□□□ -0.45
CTSB-228ENST00000533455 SPTAN1Q13813 2472 aaKnown RBP12.24□□□□□ -0.45
CTSB-228ENST00000533455 SLC25A20O43772 301 aa12.23□□□□□ -0.45
CTSB-228ENST00000533455 ACACBO00763 2458 aa12.23□□□□□ -0.45
CTSB-228ENST00000533455 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
CTSB-228ENST00000533455 TGFAP01135 160 aa12.23□□□□□ -0.45
CTSB-228ENST00000533455 LINC01600Q96MT4 127 aa12.23□□□□□ -0.45
CTSB-228ENST00000533455 AVPP01185 164 aa12.22□□□□□ -0.45
CTSB-228ENST00000533455 GNLYP22749 145 aa12.22□□□□□ -0.45
CTSB-228ENST00000533455 RAX2Q96IS3 184 aa12.22□□□□□ -0.45
CTSB-228ENST00000533455 IGHV3-64A0A075B6Q5 118 aa12.21□□□□□ -0.45
CTSB-228ENST00000533455 TMEM262E9PQX1 116 aa12.21□□□□□ -0.45
CTSB-228ENST00000533455 MRPS36P82909 103 aaKnown RBP12.21□□□□□ -0.45
CTSB-228ENST00000533455 FAM104AQ969W3 186 aa12.21□□□□□ -0.45
CTSB-228ENST00000533455 C9JAW5 83 aa12.21□□□□□ -0.46
CTSB-228ENST00000533455 IGHV3-30-3P0DP02 117 aa12.2□□□□□ -0.46
CTSB-228ENST00000533455 ATP5J2P56134 94 aa12.2□□□□□ -0.46
CTSB-228ENST00000533455 C10orf99Q6UWK7 81 aa12.2□□□□□ -0.46
CTSB-228ENST00000533455 CFAP46Q8IYW2 2715 aa12.2□□□□□ -0.46
CTSB-228ENST00000533455 LITAFQ99732 161 aa12.2□□□□□ -0.46
CTSB-228ENST00000533455 GEMIN7Q9H840 131 aaKnown RBP12.2□□□□□ -0.46
CTSB-228ENST00000533455 CD28P10747 220 aa12.2□□□□□ -0.46
CTSB-228ENST00000533455 B4DSR2 109 aa12.19□□□□□ -0.46
CTSB-228ENST00000533455 ATXN8Q156A1 80 aa12.19□□□□□ -0.46
CTSB-228ENST00000533455 TIMM21Q9BVV7 248 aa12.19□□□□□ -0.46
CTSB-228ENST00000533455 TRBV30A0A0K0K1B3 111 aa12.18□□□□□ -0.46
CTSB-228ENST00000533455 GATA3P23771 443 aa12.18□□□□□ -0.46
CTSB-228ENST00000533455 IGHV4-59P01825 116 aa12.18□□□□□ -0.46
CTSB-228ENST00000533455 RBMY1A1P0DJD3 496 aaKnown RBP12.18□□□□□ -0.46
CTSB-228ENST00000533455 RBMY1CP0DJD4 496 aa12.18□□□□□ -0.46
CTSB-228ENST00000533455 SYNJ2BPP57105 145 aa12.18□□□□□ -0.46
CTSB-228ENST00000533455 RBMY1FQ15415 496 aaKnown RBP12.18□□□□□ -0.46
CTSB-228ENST00000533455 SPANXDQ9BXN6 97 aa12.18□□□□□ -0.46
CTSB-228ENST00000533455 SPANXCQ9NY87 97 aa12.18□□□□□ -0.46
CTSB-228ENST00000533455 IGSF10Q6WRI0 2623 aa12.17□□□□□ -0.46
CTSB-228ENST00000533455 LINC01620Q4KN68 170 aa12.17□□□□□ -0.46
CTSB-228ENST00000533455 COL12A1Q99715 3063 aa12.17□□□□□ -0.46
CTSB-228ENST00000533455 IGHV1-58A0A0C4DH39 117 aa12.16□□□□□ -0.46
CTSB-228ENST00000533455 A8MTW9 85 aa12.16□□□□□ -0.46
CTSB-228ENST00000533455 H7C2G1 150 aa12.16□□□□□ -0.46
CTSB-228ENST00000533455 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
CTSB-228ENST00000533455 SPXQ9BT56 116 aa12.16□□□□□ -0.46
CTSB-228ENST00000533455 DOPEY2Q9Y3R5 2298 aa12.16□□□□□ -0.46
CTSB-228ENST00000533455 Q1RN00 199 aa12.16□□□□□ -0.46
CTSB-228ENST00000533455 ELANEP08246 267 aa12.15□□□□□ -0.46
CTSB-228ENST00000533455 PIK3CD-AS1Q5SR53 167 aa12.15□□□□□ -0.46
CTSB-228ENST00000533455 NACAE9PAV3 2078 aa12.15□□□□□ -0.46
CTSB-228ENST00000533455 PRRC2AP48634 2157 aaKnown RBP12.15□□□□□ -0.46
CTSB-228ENST00000533455 TINCRA0A1B0GVN0 87 aa12.15□□□□□ -0.47
CTSB-228ENST00000533455 SPANXA1Q9NS26 97 aa12.15□□□□□ -0.47
CTSB-228ENST00000533455 TRAV8-3A0A0A6YYJ7 113 aa12.14□□□□□ -0.47
CTSB-228ENST00000533455 Q5PR19 223 aa12.14□□□□□ -0.47
CTSB-228ENST00000533455 CITED1Q99966 193 aa12.14□□□□□ -0.47
CTSB-228ENST00000533455 TNFRSF18Q9Y5U5 241 aa12.14□□□□□ -0.47
CTSB-228ENST00000533455 CELSR1Q9NYQ6 3014 aa12.14□□□□□ -0.47
CTSB-228ENST00000533455 TRAV26-1A0A087WT03 109 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 TRBV10-2A0A0K0K1G8 114 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 TRIAP1O43715 76 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 HOXD3P31249 432 aaPredicted RBP12.13□□□□□ -0.47
CTSB-228ENST00000533455 RPL13AP40429 203 aaKnown RBP12.13□□□□□ -0.47
CTSB-228ENST00000533455 PROK1P58294 105 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 CHCHD7Q9BUK0 85 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 NDUFA12Q9UI09 145 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 ADARB2-AS1A8MUL3 147 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 MIAQ16674 131 aa12.13□□□□□ -0.47
CTSB-228ENST00000533455 NTN5Q8WTR8 489 aaPredicted RBP12.13□□□□□ -0.47
CTSB-228ENST00000533455 RNF183Q96D59 192 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms