RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 A0A087WWC5 75 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 TRAV8-6A0A0B4J262 113 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 F8W036 122 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 H7C1H1 209 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 PPP1R2P9O14990 202 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 RTL8CO15255 209 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 DNAH10OSP0CZ25 163 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 OR10J3Q5JRS4 329 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 RASL11AQ6T310 242 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 GATD1Q8NB37 220 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 TMEM191AQ9H0A3 160 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 DNAH17Q9UFH2 4485 aa8.15□□□□□ -1.1
SSBP3-214ENST00000533209 TRAV26-2A0A0B4J265 109 aa8.14□□□□□ -1.11
SSBP3-214ENST00000533209 IGHV3-38A0A0C4DH36 116 aa8.14□□□□□ -1.11
SSBP3-214ENST00000533209 RIGQ13278 110 aa8.14□□□□□ -1.11
SSBP3-214ENST00000533209 DNAJC30Q96LL9 226 aa8.14□□□□□ -1.11
SSBP3-214ENST00000533209 SEC11CQ9BY50 192 aa8.14□□□□□ -1.11
SSBP3-214ENST00000533209 NIT2Q9NQR4 276 aa8.14□□□□□ -1.11
SSBP3-214ENST00000533209 MT-ND4LP03901 98 aa8.13□□□□□ -1.11
SSBP3-214ENST00000533209 LINC01556Q5JQF7 62 aa8.13□□□□□ -1.11
SSBP3-214ENST00000533209 C6orf223Q8N319 242 aa8.13□□□□□ -1.11
SSBP3-214ENST00000533209 ANAPC16Q96DE5 110 aa8.13□□□□□ -1.11
SSBP3-214ENST00000533209 RNF185Q96GF1 192 aa8.13□□□□□ -1.11
SSBP3-214ENST00000533209 TNFRSF18Q9Y5U5 241 aa8.13□□□□□ -1.11
SSBP3-214ENST00000533209 C10orf91Q5T1B1 145 aa8.12□□□□□ -1.11
SSBP3-214ENST00000533209 NTM-AS1Q6ZSK4 140 aa8.12□□□□□ -1.11
SSBP3-214ENST00000533209 DAZ4Q86SG3 579 aaKnown RBP8.12□□□□□ -1.11
SSBP3-214ENST00000533209 FRZBQ92765 325 aa8.12□□□□□ -1.11
SSBP3-214ENST00000533209 DAZ3Q9NR90 486 aaKnown RBP8.12□□□□□ -1.11
SSBP3-214ENST00000533209 EPPK1P58107 5090 aaKnown RBP8.12□□□□□ -1.11
SSBP3-214ENST00000533209 TRAV9-2A0A087WT02 112 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 TRBV6-8A0A0A6YYG3 113 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 A0A1B0GW15 77 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 A0A1B0GXF2 115 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 K7EP13 123 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 BTF3P20290 206 aaKnown RBP8.11□□□□□ -1.11
SSBP3-214ENST00000533209 RAB4AP20338 218 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 LINC00336Q6ZUF6 198 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 AMN1Q8IY45 258 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 Q8N3U1 123 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 RPL39LQ96EH5 51 aaKnown RBP8.11□□□□□ -1.11
SSBP3-214ENST00000533209 FAT2Q9NYQ8 4349 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 FRAS1Q86XX4 4008 aa8.11□□□□□ -1.11
SSBP3-214ENST00000533209 GAS8-AS1O95177 125 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 IGHV3-30P01768 117 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 IGHV3-33P01772 117 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 IGHV3-30-3P0DP02 117 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 IGHV3-30-5P0DP03 117 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 CAMPP49913 170 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 HBBP68871 147 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 MRPL54Q6P161 138 aaKnown RBP8.1□□□□□ -1.11
SSBP3-214ENST00000533209 NIT1Q86X76 327 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 C10orf126Q8N4M7 172 aa8.1□□□□□ -1.11
SSBP3-214ENST00000533209 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.1□□□□□ -1.11
SSBP3-214ENST00000533209 CARHSP1Q9Y2V2 147 aaKnown RBP8.1□□□□□ -1.11
SSBP3-214ENST00000533209 TMEM97Q5BJF2 176 aa8.09□□□□□ -1.11
SSBP3-214ENST00000533209 FAM104BQ5XKR9 115 aa8.09□□□□□ -1.11
SSBP3-214ENST00000533209 MRAP2Q96G30 205 aa8.09□□□□□ -1.11
SSBP3-214ENST00000533209 TRBV6-5A0A0K0K1A5 114 aa8.08□□□□□ -1.12
SSBP3-214ENST00000533209 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
SSBP3-214ENST00000533209 IBA57-AS1B1ANH7 110 aa8.08□□□□□ -1.12
SSBP3-214ENST00000533209 S100A8P05109 93 aa8.08□□□□□ -1.12
SSBP3-214ENST00000533209 RPS10P46783 165 aaKnown RBP8.08□□□□□ -1.12
SSBP3-214ENST00000533209 IQCJQ1A5X6 159 aa8.08□□□□□ -1.12
SSBP3-214ENST00000533209 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
SSBP3-214ENST00000533209 ATP5L2Q7Z4Y8 100 aa8.08□□□□□ -1.12
SSBP3-214ENST00000533209 CTDSP1Q9GZU7 261 aa8.08□□□□□ -1.12
SSBP3-214ENST00000533209 IGHV1-24A0A0C4DH33 117 aa8.07□□□□□ -1.12
SSBP3-214ENST00000533209 SDHAF1A6NFY7 115 aa8.07□□□□□ -1.12
SSBP3-214ENST00000533209 SMKR1H3BMG3 65 aa8.07□□□□□ -1.12
SSBP3-214ENST00000533209 NCR2O95944 276 aa8.07□□□□□ -1.12
SSBP3-214ENST00000533209 TNP2Q05952 138 aa8.07□□□□□ -1.12
SSBP3-214ENST00000533209 MRPL51Q4U2R6 128 aaKnown RBP8.07□□□□□ -1.12
SSBP3-214ENST00000533209 KCNIP4Q6PIL6 250 aa8.07□□□□□ -1.12
SSBP3-214ENST00000533209 DEFB104AQ8WTQ1 72 aa8.07□□□□□ -1.12
SSBP3-214ENST00000533209 CHCHD7Q9BUK0 85 aa8.07□□□□□ -1.12
SSBP3-214ENST00000533209 TRBV25-1A0A075B6N4 114 aa8.06□□□□□ -1.12
SSBP3-214ENST00000533209 A0A1B0GVY2 172 aa8.06□□□□□ -1.12
SSBP3-214ENST00000533209 C7orf77A4D0Y5 90 aa8.06□□□□□ -1.12
SSBP3-214ENST00000533209 COTL1Q14019 142 aa8.06□□□□□ -1.12
SSBP3-214ENST00000533209 CLRN3Q8NCR9 226 aa8.06□□□□□ -1.12
SSBP3-214ENST00000533209 IMMP2LQ96T52 175 aa8.06□□□□□ -1.12
SSBP3-214ENST00000533209 CHCHD5Q9BSY4 110 aa8.06□□□□□ -1.12
SSBP3-214ENST00000533209 BIRC6Q9NR09 4857 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 A0A087WX48 190 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 TMEM262E9PQX1 116 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 POLR2KP53803 58 aaKnown RBP8.05□□□□□ -1.12
SSBP3-214ENST00000533209 LAGE3Q14657 143 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 MPV17L2Q567V2 206 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 NFE4Q86UQ8 179 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 NRACQ8N912 160 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 BTF3L4Q96K17 158 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 TMEM70Q9BUB7 260 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 ST20Q9HBF5 79 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 URGCP-MRPS24S4R325 110 aa8.05□□□□□ -1.12
SSBP3-214ENST00000533209 DNAH11Q96DT5 4516 aa8.04□□□□□ -1.12
SSBP3-214ENST00000533209 PKIAP61925 76 aa8.04□□□□□ -1.12
SSBP3-214ENST00000533209 GAGE6Q13070 117 aa8.04□□□□□ -1.12
SSBP3-214ENST00000533209 RHEBQ15382 184 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms