RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 HTN3P15516 51 aa7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 BTF3P20290 206 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 EMP1P54849 157 aa7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 SLAQ13239 276 aa7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 KIAA1644Q3SXP7 199 aa7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 FAM104BQ5XKR9 115 aa7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 C14orf178Q8N769 122 aaPredicted RBP7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 ZNRF2Q8NHG8 242 aa7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 NOP10Q9NPE3 64 aaKnown RBP7.88□□□□□ -1.15
TRAPPC4-213ENST00000533149 DAZ2Q13117 558 aaKnown RBP7.87□□□□□ -1.15
TRAPPC4-213ENST00000533149 AMN1Q8IY45 258 aa7.87□□□□□ -1.15
TRAPPC4-213ENST00000533149 RNF185Q96GF1 192 aa7.87□□□□□ -1.15
TRAPPC4-213ENST00000533149 MRPL16Q9NX20 251 aaKnown RBP7.87□□□□□ -1.15
TRAPPC4-213ENST00000533149 DKK2Q9UBU2 259 aa7.87□□□□□ -1.15
TRAPPC4-213ENST00000533149 DNAH5Q8TE73 4624 aa7.87□□□□□ -1.15
TRAPPC4-213ENST00000533149 RAB4AP20338 218 aa7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 MRPL51Q4U2R6 128 aaKnown RBP7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 PIK3CD-AS1Q5SR53 167 aa7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 RASL10AQ92737 203 aa7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 AP1S3Q96PC3 154 aa7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 SAMD10Q9BYL1 202 aa7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 DPH3P1Q9H4G8 78 aa7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 TMA7Q9Y2S6 64 aaKnown RBP7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 KIF25-AS1Q9Y6Z4 181 aa7.86□□□□□ -1.15
TRAPPC4-213ENST00000533149 A0A087WWL8 130 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 TRGV1A0A0A0MS02 117 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 CRYGDP07320 174 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 SMIM17P0DL12 118 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 CCL18P55774 89 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 XGP55808 180 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 LINC00315P59091 139 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 RAB5BP61020 215 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 SERTAD4-AS1Q5TG53 156 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 FAM222AQ5U5X8 452 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 Q6ZTI0 123 aa7.85□□□□□ -1.15
TRAPPC4-213ENST00000533149 A8MWV9 139 aa7.84□□□□□ -1.15
TRAPPC4-213ENST00000533149 RS1O15537 224 aa7.84□□□□□ -1.15
TRAPPC4-213ENST00000533149 ALKBH7Q9BT30 221 aaPredicted RBP7.84□□□□□ -1.15
TRAPPC4-213ENST00000533149 PGPEP1Q9NXJ5 209 aa7.84□□□□□ -1.15
TRAPPC4-213ENST00000533149 GAGE12BA1L429 117 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 SMKR1H3BMG3 65 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BKO60814 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 GAGE7O76087 117 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BJP06899 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 MGPP08493 103 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 GAGE12FP0CL80 117 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 GAGE12GP0CL81 117 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 GAGE12IP0CL82 117 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BOP23527 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 SRIP30626 198 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 CKS2P33552 79 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BBP33778 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BDP58876 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BCP62807 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST2H2BEQ16778 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 TTC32Q5I0X7 151 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 FAM74A4Q5TZK3 123 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 CFAP126Q5VTH2 177 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BHQ93079 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BNQ99877 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 HIST1H2BMQ99879 126 aa7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 FLG2Q5D862 2391 aaPredicted RBP7.83□□□□□ -1.16
TRAPPC4-213ENST00000533149 IGHV3-73A0A0B4J1V6 119 aa7.82□□□□□ -1.16
TRAPPC4-213ENST00000533149 D6R8Y8 96 aa7.82□□□□□ -1.16
TRAPPC4-213ENST00000533149 F5H697 171 aa7.82□□□□□ -1.16
TRAPPC4-213ENST00000533149 FAM229AH3BQW9 127 aa7.82□□□□□ -1.16
TRAPPC4-213ENST00000533149 DAD1P61803 113 aa7.82□□□□□ -1.16
TRAPPC4-213ENST00000533149 OR4C5Q8NGB2 326 aa7.82□□□□□ -1.16
TRAPPC4-213ENST00000533149 MRAP2Q96G30 205 aa7.82□□□□□ -1.16
TRAPPC4-213ENST00000533149 PRELID3AQ96N28 172 aa7.82□□□□□ -1.16
TRAPPC4-213ENST00000533149 TRGV2A0A075B6R0 118 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 TRAV26-2A0A0B4J265 109 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 LYRM9A8MSI8 78 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 GAS8-AS1O95177 125 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 NCR2O95944 276 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 PPBPP02775 128 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 GATA1P15976 413 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 NDUFA6P56556 154 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 UFSP1Q6NVU6 142 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 CDPF1Q6NVV7 123 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 ORMDL3Q8N138 153 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 LINC00612Q8N6U2 182 aa7.81□□□□□ -1.16
TRAPPC4-213ENST00000533149 MYCBP2O75592 4640 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 TRAV4A0A0B4J268 109 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 IGHV3-53P01767 116 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 DEFB130BP0DP73 79 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 DEFB130AP0DP74 79 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 SUMO4Q6EEV6 95 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 ZFP2Q6ZN57 461 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 Q6ZSN1 163 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 ZNF479Q96JC4 524 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 Q9H8V8 135 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 LINC00588Q9Y4M8 146 aa7.8□□□□□ -1.16
TRAPPC4-213ENST00000533149 RHODO00212 210 aa7.79□□□□□ -1.16
TRAPPC4-213ENST00000533149 NUDT3O95989 172 aa7.79□□□□□ -1.16
TRAPPC4-213ENST00000533149 NPYP01303 97 aa7.79□□□□□ -1.16
TRAPPC4-213ENST00000533149 Q0VG73 95 aa7.79□□□□□ -1.16
TRAPPC4-213ENST00000533149 ZNF56Q15929 161 aa7.79□□□□□ -1.16
TRAPPC4-213ENST00000533149 IQCJQ1A5X6 159 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms