RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 NUDT10Q8NFP7 164 aa20.19■□□□□ 0.82
SSSCA1-207ENST00000533115 NUDT11Q96G61 164 aa20.19■□□□□ 0.82
SSSCA1-207ENST00000533115 OCC1Q8TAD7 63 aa20.18■□□□□ 0.82
SSSCA1-207ENST00000533115 KRTAP4-5Q9BYR2 181 aa20.18■□□□□ 0.82
SSSCA1-207ENST00000533115 TRBV6-8A0A0A6YYG3 113 aa20.17■□□□□ 0.82
SSSCA1-207ENST00000533115 LYZL1Q6UWQ5 148 aa20.17■□□□□ 0.82
SSSCA1-207ENST00000533115 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.17■□□□□ 0.82
SSSCA1-207ENST00000533115 CHCHD7Q9BUK0 85 aa20.17■□□□□ 0.82
SSSCA1-207ENST00000533115 A0A087WX48 190 aa20.16■□□□□ 0.82
SSSCA1-207ENST00000533115 TMEM250H0YL14 139 aa20.16■□□□□ 0.82
SSSCA1-207ENST00000533115 K7EN84 100 aa20.16■□□□□ 0.82
SSSCA1-207ENST00000533115 MGPP08493 103 aa20.15■□□□□ 0.82
SSSCA1-207ENST00000533115 KCNIP4Q6PIL6 250 aa20.15■□□□□ 0.82
SSSCA1-207ENST00000533115 Q8N814 137 aa20.15■□□□□ 0.82
SSSCA1-207ENST00000533115 RNASE7Q9H1E1 156 aaKnown RBP20.15■□□□□ 0.82
SSSCA1-207ENST00000533115 KRTAP10-1P60331 282 aa20.14■□□□□ 0.81
SSSCA1-207ENST00000533115 NTN5Q8WTR8 489 aaPredicted RBP20.14■□□□□ 0.81
SSSCA1-207ENST00000533115 KLK12Q9UKR0 248 aa20.14■□□□□ 0.81
SSSCA1-207ENST00000533115 RPP21Q9H633 154 aaKnown RBP20.13■□□□□ 0.81
SSSCA1-207ENST00000533115 TRGC1P0CF51 173 aa20.12■□□□□ 0.81
SSSCA1-207ENST00000533115 GCSHP23434 173 aa20.12■□□□□ 0.81
SSSCA1-207ENST00000533115 ELOBQ15370 118 aa20.12■□□□□ 0.81
SSSCA1-207ENST00000533115 Q8N1X5 172 aa20.12■□□□□ 0.81
SSSCA1-207ENST00000533115 IGLV5-52A0A0A0MRZ9 124 aa20.11■□□□□ 0.81
SSSCA1-207ENST00000533115 TMEM262E9PQX1 116 aa20.11■□□□□ 0.81
SSSCA1-207ENST00000533115 M0QY20 66 aa20.11■□□□□ 0.81
SSSCA1-207ENST00000533115 NTF3P20783 257 aa20.11■□□□□ 0.81
SSSCA1-207ENST00000533115 CTRLP40313 264 aa20.11■□□□□ 0.81
SSSCA1-207ENST00000533115 WDR73Q6P4I2 378 aa20.11■□□□□ 0.81
SSSCA1-207ENST00000533115 COX11Q9Y6N1 276 aa20.11■□□□□ 0.81
SSSCA1-207ENST00000533115 H7C1H1 209 aa20.1■□□□□ 0.81
SSSCA1-207ENST00000533115 TMEM97Q5BJF2 176 aa20.1■□□□□ 0.81
SSSCA1-207ENST00000533115 SUMO4Q6EEV6 95 aa20.1■□□□□ 0.81
SSSCA1-207ENST00000533115 RMI2Q96E14 147 aa20.1■□□□□ 0.81
SSSCA1-207ENST00000533115 DNAJC30Q96LL9 226 aa20.09■□□□□ 0.81
SSSCA1-207ENST00000533115 CEBPGP53567 150 aa20.08■□□□□ 0.81
SSSCA1-207ENST00000533115 WFDC2Q14508 124 aa20.08■□□□□ 0.81
SSSCA1-207ENST00000533115 NTM-AS1Q6ZSK4 140 aa20.08■□□□□ 0.81
SSSCA1-207ENST00000533115 UBE2WQ96B02 151 aa20.08■□□□□ 0.81
SSSCA1-207ENST00000533115 DPH3P1Q9H4G8 78 aa20.08■□□□□ 0.81
SSSCA1-207ENST00000533115 CHCHD5Q9BSY4 110 aa20.07■□□□□ 0.8
SSSCA1-207ENST00000533115 CNFNQ9BYD5 112 aa20.07■□□□□ 0.8
SSSCA1-207ENST00000533115 EIF5A2Q9GZV4 153 aaKnown RBP20.07■□□□□ 0.8
SSSCA1-207ENST00000533115 IGKV2D-24A0A075B6R9 120 aa20.05■□□□□ 0.8
SSSCA1-207ENST00000533115 XGP55808 180 aa20.05■□□□□ 0.8
SSSCA1-207ENST00000533115 PKIAP61925 76 aa20.05■□□□□ 0.8
SSSCA1-207ENST00000533115 TWIST1Q15672 202 aa20.05■□□□□ 0.8
SSSCA1-207ENST00000533115 MPV17L2Q567V2 206 aa20.05■□□□□ 0.8
SSSCA1-207ENST00000533115 FAM210AQ96ND0 272 aa20.05■□□□□ 0.8
SSSCA1-207ENST00000533115 LECT2O14960 151 aa20.04■□□□□ 0.8
SSSCA1-207ENST00000533115 NDUFS6O75380 124 aaKnown RBP20.04■□□□□ 0.8
SSSCA1-207ENST00000533115 Q0VG73 95 aa20.04■□□□□ 0.8
SSSCA1-207ENST00000533115 RASL11AQ6T310 242 aa20.04■□□□□ 0.8
SSSCA1-207ENST00000533115 FAM231DQ6ZW35 169 aa20.04■□□□□ 0.8
SSSCA1-207ENST00000533115 GATCO43716 136 aaKnown RBP20.03■□□□□ 0.8
SSSCA1-207ENST00000533115 GTSF1Q8WW33 167 aa20.03■□□□□ 0.8
SSSCA1-207ENST00000533115 BAALCQ8WXS3 180 aa20.03■□□□□ 0.8
SSSCA1-207ENST00000533115 ATRAIDQ6UW56 229 aa20.02■□□□□ 0.8
SSSCA1-207ENST00000533115 C15orf54Q8N8G6 183 aa20.02■□□□□ 0.8
SSSCA1-207ENST00000533115 TRBV25-1A0A075B6N4 114 aa20.01■□□□□ 0.79
SSSCA1-207ENST00000533115 ANGP03950 147 aaKnown RBP20■□□□□ 0.79
SSSCA1-207ENST00000533115 ENHOQ6UWT2 76 aa20■□□□□ 0.79
SSSCA1-207ENST00000533115 SMIM7Q9BQ49 75 aa20■□□□□ 0.79
SSSCA1-207ENST00000533115 NIT2Q9NQR4 276 aa20■□□□□ 0.79
SSSCA1-207ENST00000533115 IQCJQ1A5X6 159 aa19.99■□□□□ 0.79
SSSCA1-207ENST00000533115 Q8N976 141 aa19.99■□□□□ 0.79
SSSCA1-207ENST00000533115 IGHV1-24A0A0C4DH33 117 aa19.98■□□□□ 0.79
SSSCA1-207ENST00000533115 A8MWL6 223 aa19.98■□□□□ 0.79
SSSCA1-207ENST00000533115 CRPP02741 224 aa19.98■□□□□ 0.79
SSSCA1-207ENST00000533115 GAGE6Q13070 117 aa19.98■□□□□ 0.79
SSSCA1-207ENST00000533115 SRP19P09132 144 aaKnown RBP19.97■□□□□ 0.79
SSSCA1-207ENST00000533115 RBX1P62877 108 aa19.96■□□□□ 0.79
SSSCA1-207ENST00000533115 CT83Q5H943 113 aa19.96■□□□□ 0.79
SSSCA1-207ENST00000533115 LINC01551Q86U37 167 aa19.96■□□□□ 0.79
SSSCA1-207ENST00000533115 C1orf43Q9BWL3 253 aa19.96■□□□□ 0.79
SSSCA1-207ENST00000533115 ZNF727A8MUV8 499 aa19.95■□□□□ 0.78
SSSCA1-207ENST00000533115 TMEM70Q9BUB7 260 aa19.95■□□□□ 0.78
SSSCA1-207ENST00000533115 IGLV2-33A0A075B6J2 118 aaPredicted RBP19.94■□□□□ 0.78
SSSCA1-207ENST00000533115 SMIM15Q7Z3B0 74 aa19.94■□□□□ 0.78
SSSCA1-207ENST00000533115 FRZBQ92765 325 aa19.94■□□□□ 0.78
SSSCA1-207ENST00000533115 PGLYRP4Q96LB8 373 aa19.94■□□□□ 0.78
SSSCA1-207ENST00000533115 FOXA3P55318 350 aaPredicted RBP19.93■□□□□ 0.78
SSSCA1-207ENST00000533115 GATD1Q8NB37 220 aa19.93■□□□□ 0.78
SSSCA1-207ENST00000533115 DNAH8Q96JB1 4490 aa19.92■□□□□ 0.78
SSSCA1-207ENST00000533115 TRAV26-2A0A0B4J265 109 aa19.91■□□□□ 0.78
SSSCA1-207ENST00000533115 MIAQ16674 131 aa19.91■□□□□ 0.78
SSSCA1-207ENST00000533115 PRR34Q9NV39 138 aa19.91■□□□□ 0.78
SSSCA1-207ENST00000533115 EPM2AB3EWF7 344 aa19.9■□□□□ 0.78
SSSCA1-207ENST00000533115 TMEM243Q9BU79 118 aa19.9■□□□□ 0.78
SSSCA1-207ENST00000533115 LINC00269Q8N2A0 174 aa19.89■□□□□ 0.77
SSSCA1-207ENST00000533115 OSTCQ9NRP0 149 aa19.89■□□□□ 0.77
SSSCA1-207ENST00000533115 TEX261Q6UWH6 196 aa19.88■□□□□ 0.77
SSSCA1-207ENST00000533115 DEFB104AQ8WTQ1 72 aa19.88■□□□□ 0.77
SSSCA1-207ENST00000533115 TSKUQ8WUA8 353 aa19.88■□□□□ 0.77
SSSCA1-207ENST00000533115 FAT1Q14517 4588 aa19.88■□□□□ 0.77
SSSCA1-207ENST00000533115 HAMPP81172 84 aa19.87■□□□□ 0.77
SSSCA1-207ENST00000533115 COTL1Q14019 142 aa19.87■□□□□ 0.77
SSSCA1-207ENST00000533115 CLPSL2Q6UWE3 100 aa19.87■□□□□ 0.77
SSSCA1-207ENST00000533115 BORCS7Q96B45 105 aa19.87■□□□□ 0.77
SSSCA1-207ENST00000533115 GFRA4Q9GZZ7 299 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms