RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 HLA-DQA1P01909 254 aa11.43□□□□□ -0.58
PKP3-209ENST00000533069 GATA1P15976 413 aaPredicted RBP11.43□□□□□ -0.58
PKP3-209ENST00000533069 SH2D6Q7Z4S9 175 aa11.43□□□□□ -0.58
PKP3-209ENST00000533069 GATD1Q8NB37 220 aa11.43□□□□□ -0.58
PKP3-209ENST00000533069 FRZBQ92765 325 aa11.43□□□□□ -0.58
PKP3-209ENST00000533069 GNB1LQ9BYB4 327 aa11.43□□□□□ -0.58
PKP3-209ENST00000533069 PKHD1P08F94 4074 aa11.42□□□□□ -0.58
PKP3-209ENST00000533069 M0R381 172 aa11.42□□□□□ -0.58
PKP3-209ENST00000533069 RS1O15537 224 aa11.42□□□□□ -0.58
PKP3-209ENST00000533069 CFAP126Q5VTH2 177 aa11.42□□□□□ -0.58
PKP3-209ENST00000533069 MRPL54Q6P161 138 aaKnown RBP11.42□□□□□ -0.58
PKP3-209ENST00000533069 TMEM191AQ9H0A3 160 aa11.42□□□□□ -0.58
PKP3-209ENST00000533069 HERC2O95714 4834 aa11.42□□□□□ -0.58
PKP3-209ENST00000533069 PKD1P98161 4303 aa11.41□□□□□ -0.58
PKP3-209ENST00000533069 TGIF2-C20orf24A0A0A6YYL0 155 aa11.41□□□□□ -0.58
PKP3-209ENST00000533069 COLCA2A8K830 154 aa11.41□□□□□ -0.58
PKP3-209ENST00000533069 RHODO00212 210 aa11.41□□□□□ -0.58
PKP3-209ENST00000533069 SMIM17P0DL12 118 aa11.41□□□□□ -0.58
PKP3-209ENST00000533069 TNP2Q05952 138 aa11.41□□□□□ -0.58
PKP3-209ENST00000533069 RAB5AP20339 215 aa11.4□□□□□ -0.58
PKP3-209ENST00000533069 DMRTA1Q5VZB9 504 aa11.4□□□□□ -0.58
PKP3-209ENST00000533069 TRBV6-4A0A1B0GX49 114 aa11.39□□□□□ -0.59
PKP3-209ENST00000533069 CAMPP49913 170 aa11.39□□□□□ -0.59
PKP3-209ENST00000533069 RHOHQ15669 191 aa11.39□□□□□ -0.59
PKP3-209ENST00000533069 PRADC1Q9BSG0 188 aa11.39□□□□□ -0.59
PKP3-209ENST00000533069 DPH3P1Q9H4G8 78 aa11.39□□□□□ -0.59
PKP3-209ENST00000533069 K7EP13 123 aa11.38□□□□□ -0.59
PKP3-209ENST00000533069 TIRAPP58753 221 aa11.38□□□□□ -0.59
PKP3-209ENST00000533069 RAB4BP61018 213 aa11.38□□□□□ -0.59
PKP3-209ENST00000533069 ZFP2Q6ZN57 461 aa11.38□□□□□ -0.59
PKP3-209ENST00000533069 SLC25A29Q8N8R3 303 aa11.38□□□□□ -0.59
PKP3-209ENST00000533069 TRAV9-2A0A087WT02 112 aa11.37□□□□□ -0.59
PKP3-209ENST00000533069 LOC100131303A0A0U1RQF7 123 aa11.37□□□□□ -0.59
PKP3-209ENST00000533069 TMEM136Q6ZRR5 245 aa11.37□□□□□ -0.59
PKP3-209ENST00000533069 IGHV3-73A0A0B4J1V6 119 aa11.36□□□□□ -0.59
PKP3-209ENST00000533069 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
PKP3-209ENST00000533069 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
PKP3-209ENST00000533069 PPBPP02775 128 aa11.36□□□□□ -0.59
PKP3-209ENST00000533069 RPS10P46783 165 aaKnown RBP11.36□□□□□ -0.59
PKP3-209ENST00000533069 LINC00315P59091 139 aa11.36□□□□□ -0.59
PKP3-209ENST00000533069 TRAPPC1Q9Y5R8 145 aa11.36□□□□□ -0.59
PKP3-209ENST00000533069 DNAH11Q96DT5 4516 aa11.36□□□□□ -0.59
PKP3-209ENST00000533069 KIAA1109Q2LD37 5005 aa11.35□□□□□ -0.59
PKP3-209ENST00000533069 PPP1R17O96001 155 aa11.35□□□□□ -0.59
PKP3-209ENST00000533069 FAM104BQ5XKR9 115 aa11.35□□□□□ -0.59
PKP3-209ENST00000533069 WFDC10BQ8IUB3 73 aa11.35□□□□□ -0.59
PKP3-209ENST00000533069 MSRB1Q9NZV6 116 aa11.35□□□□□ -0.59
PKP3-209ENST00000533069 H7C1H1 209 aa11.34□□□□□ -0.59
PKP3-209ENST00000533069 APCSP02743 223 aa11.34□□□□□ -0.59
PKP3-209ENST00000533069 DNAH10OSP0CZ25 163 aa11.34□□□□□ -0.59
PKP3-209ENST00000533069 EVI2AP22794 236 aa11.34□□□□□ -0.59
PKP3-209ENST00000533069 SSTP61278 116 aa11.34□□□□□ -0.59
PKP3-209ENST00000533069 NFE4Q86UQ8 179 aa11.34□□□□□ -0.59
PKP3-209ENST00000533069 MRAP2Q96G30 205 aa11.34□□□□□ -0.59
PKP3-209ENST00000533069 DYNC1H1Q14204 4646 aaKnown RBP11.33□□□□□ -0.6
PKP3-209ENST00000533069 CRYGDP07320 174 aa11.33□□□□□ -0.6
PKP3-209ENST00000533069 C14orf178Q8N769 122 aaPredicted RBP11.33□□□□□ -0.6
PKP3-209ENST00000533069 MRPL18Q9H0U6 180 aaKnown RBP11.33□□□□□ -0.6
PKP3-209ENST00000533069 LAMTOR2Q9Y2Q5 125 aa11.33□□□□□ -0.6
PKP3-209ENST00000533069 KIF25-AS1Q9Y6Z4 181 aa11.33□□□□□ -0.6
PKP3-209ENST00000533069 Q6ZRN7 208 aaPredicted RBP11.32□□□□□ -0.6
PKP3-209ENST00000533069 C10orf126Q8N4M7 172 aa11.32□□□□□ -0.6
PKP3-209ENST00000533069 TRAV8-6A0A0B4J262 113 aa11.31□□□□□ -0.6
PKP3-209ENST00000533069 C16orf90A8MZG2 172 aa11.31□□□□□ -0.6
PKP3-209ENST00000533069 RAB4AP20338 218 aa11.31□□□□□ -0.6
PKP3-209ENST00000533069 FABP9Q0Z7S8 132 aa11.31□□□□□ -0.6
PKP3-209ENST00000533069 UFSP1Q6NVU6 142 aa11.31□□□□□ -0.6
PKP3-209ENST00000533069 AMN1Q8IY45 258 aa11.31□□□□□ -0.6
PKP3-209ENST00000533069 ORMDL3Q8N138 153 aa11.31□□□□□ -0.6
PKP3-209ENST00000533069 PHOX2AO14813 284 aa11.3□□□□□ -0.6
PKP3-209ENST00000533069 ZNF56Q15929 161 aa11.3□□□□□ -0.6
PKP3-209ENST00000533069 FAM74A4Q5TZK3 123 aa11.3□□□□□ -0.6
PKP3-209ENST00000533069 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.3□□□□□ -0.6
PKP3-209ENST00000533069 ATP6V0E2Q8NHE4 81 aa11.3□□□□□ -0.6
PKP3-209ENST00000533069 GTSF1LQ9H1H1 148 aa11.3□□□□□ -0.6
PKP3-209ENST00000533069 A0A087WWL8 130 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 IGHV3-38A0A0C4DH36 116 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 F5H697 171 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 MGPP08493 103 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 CKS2P33552 79 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 LELP1Q5T871 98 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 Q6ZSN1 163 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 RNF185Q96GF1 192 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 SAMD10Q9BYL1 202 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 JPT2Q9H910 190 aa11.29□□□□□ -0.6
PKP3-209ENST00000533069 C1orf196B1AJZ1 125 aa11.28□□□□□ -0.6
PKP3-209ENST00000533069 TRGC2P03986 189 aa11.28□□□□□ -0.6
PKP3-209ENST00000533069 LINC00694P0DN24 101 aa11.28□□□□□ -0.6
PKP3-209ENST00000533069 MRPL51Q4U2R6 128 aaKnown RBP11.28□□□□□ -0.6
PKP3-209ENST00000533069 LINC01556Q5JQF7 62 aa11.28□□□□□ -0.6
PKP3-209ENST00000533069 SPATA12Q7Z6I5 190 aa11.28□□□□□ -0.6
PKP3-209ENST00000533069 TRBV10-1A0A0K0K1A3 114 aa11.27□□□□□ -0.61
PKP3-209ENST00000533069 GAGE12JA6NER3 117 aa11.27□□□□□ -0.61
PKP3-209ENST00000533069 GAGE1Q13065 139 aa11.27□□□□□ -0.61
PKP3-209ENST00000533069 GAGE4Q13068 117 aa11.27□□□□□ -0.61
PKP3-209ENST00000533069 GAGE5Q13069 117 aa11.27□□□□□ -0.61
PKP3-209ENST00000533069 GAGE13Q4V321 117 aa11.27□□□□□ -0.61
PKP3-209ENST00000533069 EREGO14944 169 aa11.26□□□□□ -0.61
PKP3-209ENST00000533069 RAB5BP61020 215 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms