RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 ZNF471Q9BX82 626 aaPredicted RBP11.07□□□□□ -0.64
RPUSD4-207ENST00000532800 CXCL1P09341 107 aa11.06□□□□□ -0.64
RPUSD4-207ENST00000532800 SSTP61278 116 aa11.06□□□□□ -0.64
RPUSD4-207ENST00000532800 NTM-AS1Q6ZSK4 140 aa11.06□□□□□ -0.64
RPUSD4-207ENST00000532800 FAM213BQ8TBF2 198 aa11.06□□□□□ -0.64
RPUSD4-207ENST00000532800 SPANXN1Q5VSR9 72 aa11.05□□□□□ -0.64
RPUSD4-207ENST00000532800 CLPSL2Q6UWE3 100 aa11.05□□□□□ -0.64
RPUSD4-207ENST00000532800 BAGE2Q86Y30 109 aa11.05□□□□□ -0.64
RPUSD4-207ENST00000532800 SFT2D1Q8WV19 159 aa11.05□□□□□ -0.64
RPUSD4-207ENST00000532800 SSBP4Q9BWG4 385 aaPredicted RBP11.05□□□□□ -0.64
RPUSD4-207ENST00000532800 F5H697 171 aa11.04□□□□□ -0.64
RPUSD4-207ENST00000532800 PRSS1P07477 247 aa11.04□□□□□ -0.64
RPUSD4-207ENST00000532800 MBD3L1Q8WWY6 194 aa11.04□□□□□ -0.64
RPUSD4-207ENST00000532800 S100A9P06702 114 aaKnown RBP11.03□□□□□ -0.64
RPUSD4-207ENST00000532800 OR5AL1P0C617 328 aa11.03□□□□□ -0.64
RPUSD4-207ENST00000532800 MIAQ16674 131 aa11.03□□□□□ -0.64
RPUSD4-207ENST00000532800 KIF25-AS1Q9Y6Z4 181 aa11.03□□□□□ -0.64
RPUSD4-207ENST00000532800 PFDN1O60925 122 aa11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 OXTP01178 125 aa11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 RPL37AP61513 92 aaKnown RBP11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 RBX1P62877 108 aa11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 GAGE6Q13070 117 aa11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 KRTAP26-1Q6PEX3 210 aa11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 KCNRGQ8N5I3 272 aa11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 PRR34Q9NV39 138 aa11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 VAX2Q9UIW0 290 aa11.02□□□□□ -0.65
RPUSD4-207ENST00000532800 HNRNPA3P51991 378 aaKnown RBP11.01□□□□□ -0.65
RPUSD4-207ENST00000532800 PKIAP61925 76 aa11.01□□□□□ -0.65
RPUSD4-207ENST00000532800 LINC00269Q8N2A0 174 aa11.01□□□□□ -0.65
RPUSD4-207ENST00000532800 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.01□□□□□ -0.65
RPUSD4-207ENST00000532800 DERL1Q9BUN8 251 aa11.01□□□□□ -0.65
RPUSD4-207ENST00000532800 PANO1I0J062 215 aa11□□□□□ -0.65
RPUSD4-207ENST00000532800 ZNF345Q14585 488 aa11□□□□□ -0.65
RPUSD4-207ENST00000532800 SERTAD4-AS1Q5TG53 156 aa11□□□□□ -0.65
RPUSD4-207ENST00000532800 AP1S3Q96PC3 154 aa11□□□□□ -0.65
RPUSD4-207ENST00000532800 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11□□□□□ -0.65
RPUSD4-207ENST00000532800 UMAD1C9J7I0 102 aa10.99□□□□□ -0.65
RPUSD4-207ENST00000532800 SMIM17P0DL12 118 aa10.99□□□□□ -0.65
RPUSD4-207ENST00000532800 GZMBP10144 247 aa10.99□□□□□ -0.65
RPUSD4-207ENST00000532800 TMEM97Q5BJF2 176 aa10.99□□□□□ -0.65
RPUSD4-207ENST00000532800 TMUB2Q71RG4 321 aa10.99□□□□□ -0.65
RPUSD4-207ENST00000532800 C9orf163Q8N9P6 203 aa10.99□□□□□ -0.65
RPUSD4-207ENST00000532800 TRBV25-1A0A075B6N4 114 aa10.98□□□□□ -0.65
RPUSD4-207ENST00000532800 MGPP08493 103 aa10.98□□□□□ -0.65
RPUSD4-207ENST00000532800 RPL35P42766 123 aaKnown RBP10.98□□□□□ -0.65
RPUSD4-207ENST00000532800 RGS21Q2M5E4 152 aa10.98□□□□□ -0.65
RPUSD4-207ENST00000532800 DGAT2L7PQ6IED9 249 aa10.98□□□□□ -0.65
RPUSD4-207ENST00000532800 DAZAP1Q96EP5 407 aaKnown RBP10.98□□□□□ -0.65
RPUSD4-207ENST00000532800 IGLV10-54A0A075B6I4 117 aa10.97□□□□□ -0.65
RPUSD4-207ENST00000532800 H2AFB1P0C5Y9 115 aa10.97□□□□□ -0.65
RPUSD4-207ENST00000532800 IQCJQ1A5X6 159 aa10.97□□□□□ -0.65
RPUSD4-207ENST00000532800 TPPP3Q9BW30 176 aa10.97□□□□□ -0.65
RPUSD4-207ENST00000532800 UBR4Q5T4S7 5183 aa10.97□□□□□ -0.65
RPUSD4-207ENST00000532800 IGHV1-24A0A0C4DH33 117 aa10.96□□□□□ -0.65
RPUSD4-207ENST00000532800 M0QY20 66 aa10.96□□□□□ -0.65
RPUSD4-207ENST00000532800 BCL2L11O43521 198 aa10.96□□□□□ -0.65
RPUSD4-207ENST00000532800 IGLC6P0CF74 106 aa10.96□□□□□ -0.65
RPUSD4-207ENST00000532800 SUMO4Q6EEV6 95 aa10.96□□□□□ -0.65
RPUSD4-207ENST00000532800 CCL20P78556 96 aa10.95□□□□□ -0.66
RPUSD4-207ENST00000532800 REG3AQ06141 175 aa10.95□□□□□ -0.66
RPUSD4-207ENST00000532800 CENPWQ5EE01 88 aa10.95□□□□□ -0.66
RPUSD4-207ENST00000532800 SDIM1Q6ZPB5 146 aa10.95□□□□□ -0.66
RPUSD4-207ENST00000532800 C20orf203Q8NBC4 194 aa10.95□□□□□ -0.66
RPUSD4-207ENST00000532800 C11orf52Q96A22 123 aa10.95□□□□□ -0.66
RPUSD4-207ENST00000532800 GNG13Q9P2W3 67 aa10.95□□□□□ -0.66
RPUSD4-207ENST00000532800 KANTRA0A1W2PQU2 76 aa10.94□□□□□ -0.66
RPUSD4-207ENST00000532800 HMSDA8MTL9 139 aa10.94□□□□□ -0.66
RPUSD4-207ENST00000532800 FER1L6-AS1Q8NA97 138 aa10.94□□□□□ -0.66
RPUSD4-207ENST00000532800 OR2D3Q8NGH3 330 aa10.94□□□□□ -0.66
RPUSD4-207ENST00000532800 GFRA4Q9GZZ7 299 aa10.94□□□□□ -0.66
RPUSD4-207ENST00000532800 IGLV4-60A0A075B6I1 120 aa10.93□□□□□ -0.66
RPUSD4-207ENST00000532800 A0A0D9SG52 128 aa10.93□□□□□ -0.66
RPUSD4-207ENST00000532800 NKX2-5P52952 324 aaPredicted RBP10.93□□□□□ -0.66
RPUSD4-207ENST00000532800 PLA2G2DQ9UNK4 145 aa10.93□□□□□ -0.66
RPUSD4-207ENST00000532800 C19orf71A6NCJ1 209 aa10.92□□□□□ -0.66
RPUSD4-207ENST00000532800 MANBALQ9NQG1 85 aa10.92□□□□□ -0.66
RPUSD4-207ENST00000532800 hDV102S1A0JD36 115 aa10.91□□□□□ -0.66
RPUSD4-207ENST00000532800 RAB19A4D1S5 217 aa10.91□□□□□ -0.66
RPUSD4-207ENST00000532800 H7C1H1 209 aa10.91□□□□□ -0.66
RPUSD4-207ENST00000532800 RAB5CP51148 216 aa10.91□□□□□ -0.66
RPUSD4-207ENST00000532800 CNBPP62633 177 aaKnown RBP10.91□□□□□ -0.66
RPUSD4-207ENST00000532800 CLRN3Q8NCR9 226 aa10.91□□□□□ -0.66
RPUSD4-207ENST00000532800 TMEM243Q9BU79 118 aa10.91□□□□□ -0.66
RPUSD4-207ENST00000532800 SLPIP03973 132 aa10.9□□□□□ -0.66
RPUSD4-207ENST00000532800 RPS20P60866 119 aaKnown RBP10.9□□□□□ -0.66
RPUSD4-207ENST00000532800 CACNG7P62955 275 aa10.9□□□□□ -0.66
RPUSD4-207ENST00000532800 RASL11AQ6T310 242 aa10.9□□□□□ -0.66
RPUSD4-207ENST00000532800 CHTF8P0CG12 524 aa10.89□□□□□ -0.67
RPUSD4-207ENST00000532800 EIF5AP63241 154 aaKnown RBP10.89□□□□□ -0.67
RPUSD4-207ENST00000532800 CIRBPQ14011 172 aaKnown RBP10.89□□□□□ -0.67
RPUSD4-207ENST00000532800 TRBV20OR9-2A0A075B6H5 130 aa10.88□□□□□ -0.67
RPUSD4-207ENST00000532800 TRAV8-4A0A0B4J246 113 aa10.88□□□□□ -0.67
RPUSD4-207ENST00000532800 A0A1B0GUV1 79 aa10.88□□□□□ -0.67
RPUSD4-207ENST00000532800 P01737 135 aa10.88□□□□□ -0.67
RPUSD4-207ENST00000532800 MT1HL1P0DM35 61 aa10.88□□□□□ -0.67
RPUSD4-207ENST00000532800 C4orf48Q5BLP8 95 aa10.88□□□□□ -0.67
RPUSD4-207ENST00000532800 LYZL1Q6UWQ5 148 aa10.88□□□□□ -0.67
RPUSD4-207ENST00000532800 TRAV1-1A0A0B4J248 108 aa10.87□□□□□ -0.67
RPUSD4-207ENST00000532800 GNG4P50150 75 aa10.87□□□□□ -0.67
RPUSD4-207ENST00000532800 PGLYRP4Q96LB8 373 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms