RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 A0A1W2PPM0 123 aa11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 C12orf74Q32Q52 190 aa11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 SHISA2Q6UWI4 295 aa11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 C11orf45Q8TAV5 145 aa11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 FANCD2OSQ96PS1 177 aa11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 FSTL3O95633 263 aa11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 C1orf229Q6ZS94 237 aaPredicted RBP11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 KLK12Q9UKR0 248 aa11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 SPAG11BQ08648 103 aa11.29□□□□□ -0.6
PCDHA9-202ENST00000532602 Q6YL49 198 aa11.28□□□□□ -0.6
PCDHA9-202ENST00000532602 MAP6D1Q9H9H5 199 aa11.28□□□□□ -0.6
PCDHA9-202ENST00000532602 PLA2G2EQ9NZK7 142 aa11.28□□□□□ -0.6
PCDHA9-202ENST00000532602 ODF3BA8MYP8 253 aa11.28□□□□□ -0.6
PCDHA9-202ENST00000532602 TIMM17AQ99595 171 aa11.28□□□□□ -0.6
PCDHA9-202ENST00000532602 BAALC-AS2P0C853 105 aa11.28□□□□□ -0.6
PCDHA9-202ENST00000532602 MAJINQ3KP22 176 aa11.28□□□□□ -0.6
PCDHA9-202ENST00000532602 MED12LQ86YW9 2145 aa11.27□□□□□ -0.6
PCDHA9-202ENST00000532602 NACAE9PAV3 2078 aa11.27□□□□□ -0.61
PCDHA9-202ENST00000532602 TRBV6-1A0A0K0K1D8 114 aa11.27□□□□□ -0.61
PCDHA9-202ENST00000532602 IGHV4-4A0A075B6R2 117 aa11.26□□□□□ -0.61
PCDHA9-202ENST00000532602 SMIM9A6NGZ8 99 aa11.26□□□□□ -0.61
PCDHA9-202ENST00000532602 NAV2Q8IVL1 2488 aa11.26□□□□□ -0.61
PCDHA9-202ENST00000532602 CDSNQ15517 529 aa11.26□□□□□ -0.61
PCDHA9-202ENST00000532602 IGF1P05019 195 aa11.26□□□□□ -0.61
PCDHA9-202ENST00000532602 CTRLP40313 264 aa11.25□□□□□ -0.61
PCDHA9-202ENST00000532602 ANKRD29Q8N6D5 301 aa11.25□□□□□ -0.61
PCDHA9-202ENST00000532602 CCDC140Q96MF4 163 aa11.25□□□□□ -0.61
PCDHA9-202ENST00000532602 LINC00574Q9H8X3 128 aa11.25□□□□□ -0.61
PCDHA9-202ENST00000532602 LGALS9O00182 355 aa11.25□□□□□ -0.61
PCDHA9-202ENST00000532602 LY6G6DO95868 133 aa11.25□□□□□ -0.61
PCDHA9-202ENST00000532602 C10orf99Q6UWK7 81 aa11.25□□□□□ -0.61
PCDHA9-202ENST00000532602 ARHGAP21Q5T5U3 1957 aa11.24□□□□□ -0.61
PCDHA9-202ENST00000532602 K7ERJ3 54 aa11.24□□□□□ -0.61
PCDHA9-202ENST00000532602 NTN5Q8WTR8 489 aaPredicted RBP11.24□□□□□ -0.61
PCDHA9-202ENST00000532602 Q6ZPA2 131 aa11.24□□□□□ -0.61
PCDHA9-202ENST00000532602 H3BMG7 143 aa11.24□□□□□ -0.61
PCDHA9-202ENST00000532602 K7EP13 123 aa11.24□□□□□ -0.61
PCDHA9-202ENST00000532602 HILS1P60008 231 aa11.24□□□□□ -0.61
PCDHA9-202ENST00000532602 C15orf53Q8NAA6 179 aa11.24□□□□□ -0.61
PCDHA9-202ENST00000532602 TRACP01848 142 aa11.23□□□□□ -0.61
PCDHA9-202ENST00000532602 RNF183Q96D59 192 aa11.23□□□□□ -0.61
PCDHA9-202ENST00000532602 ODF3Q96PU9 254 aa11.23□□□□□ -0.61
PCDHA9-202ENST00000532602 SPATA25Q9BR10 227 aa11.23□□□□□ -0.61
PCDHA9-202ENST00000532602 LYRM9A8MSI8 78 aa11.23□□□□□ -0.61
PCDHA9-202ENST00000532602 PCP2Q8IVA1 136 aa11.22□□□□□ -0.61
PCDHA9-202ENST00000532602 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
PCDHA9-202ENST00000532602 CHD3Q12873 2000 aaKnown RBP11.22□□□□□ -0.61
PCDHA9-202ENST00000532602 C11orf71Q6IPW1 123 aa11.22□□□□□ -0.61
PCDHA9-202ENST00000532602 ACYP1P07311 99 aa11.22□□□□□ -0.61
PCDHA9-202ENST00000532602 CCL25O15444 150 aa11.22□□□□□ -0.61
PCDHA9-202ENST00000532602 CCDC168Q8NDH2 2452 aa11.22□□□□□ -0.61
PCDHA9-202ENST00000532602 RPL39P62891 51 aaKnown RBP11.21□□□□□ -0.61
PCDHA9-202ENST00000532602 TOMM6Q96B49 74 aa11.21□□□□□ -0.61
PCDHA9-202ENST00000532602 SORL1Q92673 2214 aa11.21□□□□□ -0.61
PCDHA9-202ENST00000532602 CRYBA4P53673 196 aa11.21□□□□□ -0.61
PCDHA9-202ENST00000532602 TP53TG3Q9ULZ0 132 aa11.21□□□□□ -0.61
PCDHA9-202ENST00000532602 GTSF1Q8WW33 167 aa11.21□□□□□ -0.62
PCDHA9-202ENST00000532602 MUSTN1Q8IVN3 82 aa11.2□□□□□ -0.62
PCDHA9-202ENST00000532602 C20orf203Q8NBC4 194 aa11.2□□□□□ -0.62
PCDHA9-202ENST00000532602 DIRC1Q969H9 104 aa11.2□□□□□ -0.62
PCDHA9-202ENST00000532602 COA6Q5JTJ3 125 aaKnown RBP11.2□□□□□ -0.62
PCDHA9-202ENST00000532602 CRIP3Q6Q6R5 217 aa11.2□□□□□ -0.62
PCDHA9-202ENST00000532602 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
PCDHA9-202ENST00000532602 PLA2G2AP14555 144 aa11.2□□□□□ -0.62
PCDHA9-202ENST00000532602 DSCAMO60469 2012 aa11.19□□□□□ -0.62
PCDHA9-202ENST00000532602 NAV3Q8IVL0 2385 aa11.19□□□□□ -0.62
PCDHA9-202ENST00000532602 A4D1N5 150 aa11.19□□□□□ -0.62
PCDHA9-202ENST00000532602 FAM110AQ9BQ89 295 aa11.19□□□□□ -0.62
PCDHA9-202ENST00000532602 DEFB114Q30KQ6 69 aa11.19□□□□□ -0.62
PCDHA9-202ENST00000532602 IGKV1D-37A0A075B6S9 117 aa11.19□□□□□ -0.62
PCDHA9-202ENST00000532602 BRWD1-AS2P59051 145 aa11.19□□□□□ -0.62
PCDHA9-202ENST00000532602 LINC00173Q6ZV60 143 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 NREPQ16612 68 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 TRAV26-1A0A087WT03 109 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 K7EQG2 157 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 BAALCQ8WXS3 180 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 B9D2Q9BPU9 175 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 NCOR2Q9Y618 2525 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 C11orf86A6NJI1 115 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 FAM222AQ5U5X8 452 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 SMR3AQ99954 134 aa11.18□□□□□ -0.62
PCDHA9-202ENST00000532602 HIVEP3Q5T1R4 2406 aa11.17□□□□□ -0.62
PCDHA9-202ENST00000532602 KIAA1549Q9HCM3 1950 aa11.17□□□□□ -0.62
PCDHA9-202ENST00000532602 Q6ZSV7 163 aa11.17□□□□□ -0.62
PCDHA9-202ENST00000532602 GAGE12HA6NDE8 117 aa11.17□□□□□ -0.62
PCDHA9-202ENST00000532602 LINC00482Q8N8I6 264 aa11.17□□□□□ -0.62
PCDHA9-202ENST00000532602 NCR3O14931 201 aa11.17□□□□□ -0.62
PCDHA9-202ENST00000532602 LRP4O75096 1905 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 JMJD7-PLA2G4BH0Y9G9 81 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 P0DMU3 169 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 FAM231AP0DMU4 169 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 FAM231CP0DMU5 169 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 E9PLD3 99 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 EBI3Q14213 229 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 TANC2Q9HCD6 1990 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 IGHV4-28A0A0C4DH34 117 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 MIFP14174 115 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 MP68P56378 58 aa11.16□□□□□ -0.62
PCDHA9-202ENST00000532602 IGHV1-58A0A0C4DH39 117 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms