RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 C18orf15Q96N68 181 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 MRPL16Q9NX20 251 aaKnown RBP4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 GNG13Q9P2W3 67 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 ZFP30Q9Y2G7 519 aa4.04□□□□□ -1.76
HMGB1P42-201ENST00000532126 TRAV1-1A0A0B4J248 108 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 IGHV3-16A0A0C4DH30 117 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 FABP5P3A8MUU1 101 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 SMIM1B2RUZ4 78 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 TYMSP04818 313 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 AKR1C3P42330 323 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 SULT1A2P50226 295 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 CCL20P78556 96 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 IFITM2Q01629 132 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 UBE2DNLQ8IWF7 75 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 POM121L12Q8N7R1 296 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 PGLYRP4Q96LB8 373 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 MANBALQ9NQG1 85 aa4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 DYNC2H1Q8NCM8 4307 aaKnown RBP4.03□□□□□ -1.76
HMGB1P42-201ENST00000532126 HYDINQ4G0P3 5121 aa4.03□□□□□ -1.77
HMGB1P42-201ENST00000532126 A0A0J9YY99 117 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 TRBV6-1A0A0K0K1D8 114 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 F8W036 122 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 H3BNG1 76 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 M0R2P5 195 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 OXTP01178 125 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 LTAP01374 205 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 IFNA1P01562 189 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 IGHV3-53P01767 116 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 RNF212Q495C1 297 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 OR10J3Q5JRS4 329 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 CBLN2Q8IUK8 224 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 ZFP82Q8N141 532 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 LYSTQ99698 3801 aa4.02□□□□□ -1.77
HMGB1P42-201ENST00000532126 IGKV3D-20A0A0C4DH25 116 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 TRGV4A0A0C4DH28 118 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 B4DEV8 164 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 C9JCJ5 164 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 S100A4P26447 101 aaKnown RBP4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 ASIPP42127 132 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 CRIP1P50238 77 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 CCL18P55774 89 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 ZNF876PQ49A33 203 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 FAM162BQ5T6X4 162 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 ALKAL2Q6UX46 152 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 FAM19A1Q7Z5A9 133 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 MRPL55Q7Z7F7 128 aaKnown RBP4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 BAGE2Q86Y30 109 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 ZC2HC1AQ96GY0 325 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 PACRGQ96M98 296 aaPredicted RBP4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 TXNDC17Q9BRA2 123 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 PRO0255Q9UI72 69 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 HHLA3Q9XRX5 114 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 PLECQ15149 4684 aaKnown RBP4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 ALMS1Q8TCU4 4167 aa4.01□□□□□ -1.77
HMGB1P42-201ENST00000532126 TRAV4A0A0B4J268 109 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 KRBOX1C9JBD0 128 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 PDE6DO43924 150 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 SH2D1AO60880 128 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 SFTA3P0C7M3 94 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 BCL2P10415 239 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 RPL35P42766 123 aaKnown RBP4□□□□□ -1.77
HMGB1P42-201ENST00000532126 CRYBA4P53673 196 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 MEF2BQ02080 365 aaPredicted RBP4□□□□□ -1.77
HMGB1P42-201ENST00000532126 FHL2Q14192 279 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 NRACQ8N912 160 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 VSIG2Q96IQ7 327 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 OCR1Q9BZK8 76 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 VAX2Q9UIW0 290 aa4□□□□□ -1.77
HMGB1P42-201ENST00000532126 IGLV2-18A0A075B6J9 118 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 TMSB15BA0A087X1C1 80 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 GRIFINA4D1Z8 144 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 RNASE3P12724 160 aaKnown RBP3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 PFN2P35080 140 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 CENPWQ5EE01 88 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 UFSP1Q6NVU6 142 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 RPL36ALQ969Q0 106 aaKnown RBP3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 C12orf57Q99622 126 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 DERL1Q9BUN8 251 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 PARLQ9H300 379 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 MED9Q9NWA0 146 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 IL36BQ9NZH7 164 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 LINC00588Q9Y4M8 146 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 ICOSQ9Y6W8 199 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 DNAH1Q9P2D7 4330 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 SACSQ9NZJ4 4579 aa3.99□□□□□ -1.77
HMGB1P42-201ENST00000532126 A0A096LPF7 62 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 IGHV3-73A0A0B4J1V6 119 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 FAM240AA0A1B0GVK7 77 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 A8MWV9 139 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 H3BVH4 76 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 M0R2N4 97 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 ARMS2P0C7Q2 107 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 MGST1P10620 155 aaKnown RBP3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 S100PP25815 95 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 SRIP30626 198 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 GNG4P50150 75 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 NDUFV3P56181 108 aaKnown RBP3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 ESRGQ1W209 222 aa3.98□□□□□ -1.77
HMGB1P42-201ENST00000532126 ZNF506Q5JVG8 444 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms