RNA–Protein interactions for RNA: ENST00000531741.1

VPS26B-206, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-206ENST00000531741 C18orf65Q6ZTR6 163 aa12.36□□□□□ -0.43
VPS26B-206ENST00000531741 DOPEY2Q9Y3R5 2298 aa12.36□□□□□ -0.43
VPS26B-206ENST00000531741 KRTAP10-9P60411 292 aa12.36□□□□□ -0.43
VPS26B-206ENST00000531741 TMEM170BQ5T4T1 132 aa12.36□□□□□ -0.43
VPS26B-206ENST00000531741 DEFB104AQ8WTQ1 72 aa12.36□□□□□ -0.43
VPS26B-206ENST00000531741 BBC3Q96PG8 261 aaPredicted RBP12.36□□□□□ -0.43
VPS26B-206ENST00000531741 USP9YO00507 2555 aaPredicted RBP12.36□□□□□ -0.43
VPS26B-206ENST00000531741 ACACBO00763 2458 aa12.35□□□□□ -0.43
VPS26B-206ENST00000531741 SRSF9Q13242 221 aaKnown RBP eCLIP12.35□□□□□ -0.43
VPS26B-206ENST00000531741 DEFB136Q30KP8 78 aa12.35□□□□□ -0.43
VPS26B-206ENST00000531741 LINC00467Q9BRT7 94 aa12.35□□□□□ -0.43
VPS26B-206ENST00000531741 MYO18BQ8IUG5 2567 aa12.35□□□□□ -0.43
VPS26B-206ENST00000531741 FBN2P35556 2912 aa12.35□□□□□ -0.43
VPS26B-206ENST00000531741 A8MWV9 139 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 ZNF843Q8N446 348 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 PYGO1Q9Y3Y4 419 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 MAP1AP78559 2803 aaPredicted RBP12.34□□□□□ -0.43
VPS26B-206ENST00000531741 CRYBG3Q68DQ2 2970 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 RBMY1BA6NDE4 496 aaKnown RBP12.34□□□□□ -0.43
VPS26B-206ENST00000531741 RBMY1EA6NEQ0 496 aaKnown RBP12.34□□□□□ -0.43
VPS26B-206ENST00000531741 M0R2P5 195 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 RBMY1DP0C7P1 496 aaKnown RBP12.34□□□□□ -0.43
VPS26B-206ENST00000531741 TSPEAR-AS2P59090 65 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 TMEM61Q8N0U2 210 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 TMEM86BQ8N661 226 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 AMELXQ99217 191 aa12.34□□□□□ -0.43
VPS26B-206ENST00000531741 J3QQQ9 107 aa12.33□□□□□ -0.44
VPS26B-206ENST00000531741 CRYBA4P53673 196 aa12.33□□□□□ -0.44
VPS26B-206ENST00000531741 SLC25A29Q8N8R3 303 aa12.33□□□□□ -0.44
VPS26B-206ENST00000531741 IGLV4-3A0A075B6K6 122 aa12.33□□□□□ -0.44
VPS26B-206ENST00000531741 TMEM223A0PJW6 202 aa12.33□□□□□ -0.44
VPS26B-206ENST00000531741 LEPROTO15243 131 aa12.32□□□□□ -0.44
VPS26B-206ENST00000531741 ZNF415Q09FC8 603 aa12.32□□□□□ -0.44
VPS26B-206ENST00000531741 DLX4Q92988 240 aaPredicted RBP12.32□□□□□ -0.44
VPS26B-206ENST00000531741 C21orf62-AS1Q17RA5 79 aa12.31□□□□□ -0.44
VPS26B-206ENST00000531741 Q96MF0 132 aa12.31□□□□□ -0.44
VPS26B-206ENST00000531741 CLUHP3Q96NS8 147 aa12.31□□□□□ -0.44
VPS26B-206ENST00000531741 DUX3Q96PT4 197 aa12.31□□□□□ -0.44
VPS26B-206ENST00000531741 OPRPNQ99935 248 aaPredicted RBP12.31□□□□□ -0.44
VPS26B-206ENST00000531741 MAP6D1Q9H9H5 199 aa12.31□□□□□ -0.44
VPS26B-206ENST00000531741 PGPEP1Q9NXJ5 209 aa12.31□□□□□ -0.44
VPS26B-206ENST00000531741 LGALS3P17931 250 aaKnown RBP12.31□□□□□ -0.44
VPS26B-206ENST00000531741 VCX2Q9H322 139 aa12.31□□□□□ -0.44
VPS26B-206ENST00000531741 UTP20O75691 2785 aaKnown RBP12.3□□□□□ -0.44
VPS26B-206ENST00000531741 SORL1Q92673 2214 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 H3BMG7 143 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 IGHV3-30P01768 117 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 IGHV3-30-5P0DP03 117 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 ZNF22P17026 224 aaPredicted RBP12.3□□□□□ -0.44
VPS26B-206ENST00000531741 DEFB114Q30KQ6 69 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 KRTAP1-3Q8IUG1 177 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 MRPL16Q9NX20 251 aaKnown RBP12.3□□□□□ -0.44
VPS26B-206ENST00000531741 RHODO00212 210 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 TEX29Q8N6K0 151 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 DYNLRB2Q8TF09 96 aa12.3□□□□□ -0.44
VPS26B-206ENST00000531741 CSMD2Q7Z408 3487 aa12.29□□□□□ -0.44
VPS26B-206ENST00000531741 TEX48A0A1B0GUV7 120 aa12.29□□□□□ -0.44
VPS26B-206ENST00000531741 PRO0461Q9UI25 63 aa12.29□□□□□ -0.44
VPS26B-206ENST00000531741 UBR5O95071 2799 aaPredicted RBP12.28□□□□□ -0.44
VPS26B-206ENST00000531741 HTN1P15515 57 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 RPL24P83731 157 aaKnown RBP12.28□□□□□ -0.44
VPS26B-206ENST00000531741 GAGE13Q4V321 117 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 C11orf72Q8NBR9 251 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 RAX2Q96IS3 184 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 SPXQ9BT56 116 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 TNFRSF18Q9Y5U5 241 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 ZANQ9Y493 2812 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 WFDC2Q14508 124 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 BEAN1Q3B7T3 259 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 NDUFA11Q86Y39 141 aa12.28□□□□□ -0.44
VPS26B-206ENST00000531741 FAM208BQ5VWN6 2430 aa12.27□□□□□ -0.44
VPS26B-206ENST00000531741 ZNF462Q96JM2 2506 aa12.27□□□□□ -0.45
VPS26B-206ENST00000531741 TSPAN13O95857 204 aa12.27□□□□□ -0.45
VPS26B-206ENST00000531741 CFAP126Q5VTH2 177 aa12.27□□□□□ -0.45
VPS26B-206ENST00000531741 FAM104AQ969W3 186 aa12.27□□□□□ -0.45
VPS26B-206ENST00000531741 USP24Q9UPU5 2620 aa12.27□□□□□ -0.45
VPS26B-206ENST00000531741 PROK1P58294 105 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 UBE2D3P61077 147 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 UBE2D2P62837 147 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 MRPS36P82909 103 aaKnown RBP12.26□□□□□ -0.45
VPS26B-206ENST00000531741 LYRM7Q5U5X0 104 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 DNAJC30Q96LL9 226 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 TRAV25A0A0B4J276 109 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 A0A0J9YXV3 536 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 INSP01308 110 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 POLQO75417 2590 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 NACAE9PAV3 2078 aa12.26□□□□□ -0.45
VPS26B-206ENST00000531741 IGHV3-73A0A0B4J1V6 119 aa12.25□□□□□ -0.45
VPS26B-206ENST00000531741 IGHV3-53P01767 116 aa12.25□□□□□ -0.45
VPS26B-206ENST00000531741 CD28P10747 220 aa12.25□□□□□ -0.45
VPS26B-206ENST00000531741 KHDC1LQ5JSQ8 128 aa12.25□□□□□ -0.45
VPS26B-206ENST00000531741 SPANXA1Q9NS26 97 aa12.25□□□□□ -0.45
VPS26B-206ENST00000531741 MXRA5Q9NR99 2828 aa12.25□□□□□ -0.45
VPS26B-206ENST00000531741 Q6ZSV7 163 aa12.25□□□□□ -0.45
VPS26B-206ENST00000531741 LINC01587Q99440 93 aa12.25□□□□□ -0.45
VPS26B-206ENST00000531741 PTPN13Q12923 2485 aa12.24□□□□□ -0.45
VPS26B-206ENST00000531741 CFC1BP0CG36 223 aa12.24□□□□□ -0.45
VPS26B-206ENST00000531741 CFC1P0CG37 223 aa12.24□□□□□ -0.45
VPS26B-206ENST00000531741 COTL1Q14019 142 aa12.24□□□□□ -0.45
VPS26B-206ENST00000531741 CREBBPQ92793 2442 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms