RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 PGLYRP4Q96LB8 373 aa12.85□□□□□ -0.35
UBXN1-212ENST00000531625 A0A087WWL8 130 aa12.84□□□□□ -0.35
UBXN1-212ENST00000531625 FAM74A4Q5TZK3 123 aa12.84□□□□□ -0.35
UBXN1-212ENST00000531625 WFDC10BQ8IUB3 73 aa12.84□□□□□ -0.35
UBXN1-212ENST00000531625 SAMD10Q9BYL1 202 aa12.84□□□□□ -0.35
UBXN1-212ENST00000531625 K7EQD1 137 aa12.83□□□□□ -0.36
UBXN1-212ENST00000531625 SRIP30626 198 aa12.83□□□□□ -0.36
UBXN1-212ENST00000531625 Q6ZSN1 163 aa12.83□□□□□ -0.36
UBXN1-212ENST00000531625 TMEM70Q9BUB7 260 aa12.83□□□□□ -0.36
UBXN1-212ENST00000531625 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
UBXN1-212ENST00000531625 HIGD1CA8MV81 97 aa12.82□□□□□ -0.36
UBXN1-212ENST00000531625 RHODO00212 210 aa12.82□□□□□ -0.36
UBXN1-212ENST00000531625 CIDEAO60543 219 aa12.82□□□□□ -0.36
UBXN1-212ENST00000531625 ZFP2Q6ZN57 461 aa12.82□□□□□ -0.36
UBXN1-212ENST00000531625 C10orf126Q8N4M7 172 aa12.82□□□□□ -0.36
UBXN1-212ENST00000531625 BORCS7Q96B45 105 aa12.82□□□□□ -0.36
UBXN1-212ENST00000531625 AP1S3Q96PC3 154 aa12.82□□□□□ -0.36
UBXN1-212ENST00000531625 FAM231BA6NCW3 169 aa12.81□□□□□ -0.36
UBXN1-212ENST00000531625 PPP1R2P9O14990 202 aa12.81□□□□□ -0.36
UBXN1-212ENST00000531625 MT-ND4LP03901 98 aa12.81□□□□□ -0.36
UBXN1-212ENST00000531625 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
UBXN1-212ENST00000531625 NTF3P20783 257 aa12.81□□□□□ -0.36
UBXN1-212ENST00000531625 TWIST1Q15672 202 aa12.81□□□□□ -0.36
UBXN1-212ENST00000531625 WDR73Q6P4I2 378 aa12.81□□□□□ -0.36
UBXN1-212ENST00000531625 NTN5Q8WTR8 489 aaPredicted RBP12.81□□□□□ -0.36
UBXN1-212ENST00000531625 CRYGDP07320 174 aa12.8□□□□□ -0.36
UBXN1-212ENST00000531625 SMIM17P0DL12 118 aa12.8□□□□□ -0.36
UBXN1-212ENST00000531625 GYPEP15421 78 aa12.8□□□□□ -0.36
UBXN1-212ENST00000531625 FOXA3P55318 350 aaPredicted RBP12.8□□□□□ -0.36
UBXN1-212ENST00000531625 UFSP1Q6NVU6 142 aa12.8□□□□□ -0.36
UBXN1-212ENST00000531625 C14orf178Q8N769 122 aaPredicted RBP12.8□□□□□ -0.36
UBXN1-212ENST00000531625 CNFNQ9BYD5 112 aa12.8□□□□□ -0.36
UBXN1-212ENST00000531625 IGLV5-52A0A0A0MRZ9 124 aa12.79□□□□□ -0.36
UBXN1-212ENST00000531625 TRGC1P0CF51 173 aa12.79□□□□□ -0.36
UBXN1-212ENST00000531625 C10orf91Q5T1B1 145 aa12.79□□□□□ -0.36
UBXN1-212ENST00000531625 NUP35Q8NFH5 326 aa12.79□□□□□ -0.36
UBXN1-212ENST00000531625 ANAPC16Q96DE5 110 aa12.79□□□□□ -0.36
UBXN1-212ENST00000531625 NAT8BQ9UHF3 227 aa12.79□□□□□ -0.36
UBXN1-212ENST00000531625 CARHSP1Q9Y2V2 147 aaKnown RBP12.79□□□□□ -0.36
UBXN1-212ENST00000531625 SMIM27A0A1W2PRY6 76 aa12.78□□□□□ -0.36
UBXN1-212ENST00000531625 LRCOL1A6NCL2 159 aa12.78□□□□□ -0.36
UBXN1-212ENST00000531625 HAMPP81172 84 aa12.78□□□□□ -0.36
UBXN1-212ENST00000531625 SLC7A5P1Q8MH63 180 aa12.78□□□□□ -0.36
UBXN1-212ENST00000531625 SLC25A29Q8N8R3 303 aa12.78□□□□□ -0.36
UBXN1-212ENST00000531625 A0A1B0GUT8 65 aa12.77□□□□□ -0.37
UBXN1-212ENST00000531625 ZNF56Q15929 161 aa12.77□□□□□ -0.37
UBXN1-212ENST00000531625 PRADC1Q9BSG0 188 aa12.77□□□□□ -0.37
UBXN1-212ENST00000531625 TRBV6-4A0A1B0GX49 114 aa12.76□□□□□ -0.37
UBXN1-212ENST00000531625 F5H697 171 aa12.76□□□□□ -0.37
UBXN1-212ENST00000531625 J3QL48 77 aa12.76□□□□□ -0.37
UBXN1-212ENST00000531625 MGPP08493 103 aa12.76□□□□□ -0.37
UBXN1-212ENST00000531625 TIRAPP58753 221 aa12.76□□□□□ -0.37
UBXN1-212ENST00000531625 RHOHQ15669 191 aa12.76□□□□□ -0.37
UBXN1-212ENST00000531625 NDUFA5Q16718 116 aa12.76□□□□□ -0.37
UBXN1-212ENST00000531625 SMIM15Q7Z3B0 74 aa12.76□□□□□ -0.37
UBXN1-212ENST00000531625 LOC100131303A0A0U1RQF7 123 aa12.75□□□□□ -0.37
UBXN1-212ENST00000531625 PSCAO43653 123 aa12.75□□□□□ -0.37
UBXN1-212ENST00000531625 RIGQ13278 110 aa12.75□□□□□ -0.37
UBXN1-212ENST00000531625 SH2D6Q7Z4S9 175 aa12.75□□□□□ -0.37
UBXN1-212ENST00000531625 KIF25-AS1Q9Y6Z4 181 aa12.75□□□□□ -0.37
UBXN1-212ENST00000531625 APOC3P02656 99 aa12.74□□□□□ -0.37
UBXN1-212ENST00000531625 RAB4BP61018 213 aa12.74□□□□□ -0.37
UBXN1-212ENST00000531625 DPH3P1Q9H4G8 78 aa12.74□□□□□ -0.37
UBXN1-212ENST00000531625 IGHV3-38A0A0C4DH36 116 aa12.73□□□□□ -0.37
UBXN1-212ENST00000531625 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
UBXN1-212ENST00000531625 Q8N814 137 aa12.73□□□□□ -0.37
UBXN1-212ENST00000531625 CLRN3Q8NCR9 226 aa12.73□□□□□ -0.37
UBXN1-212ENST00000531625 CTDSP1Q9GZU7 261 aa12.73□□□□□ -0.37
UBXN1-212ENST00000531625 IBA57-AS1B1ANH7 110 aa12.72□□□□□ -0.37
UBXN1-212ENST00000531625 FAM30AQ9NZY2 134 aa12.72□□□□□ -0.37
UBXN1-212ENST00000531625 C7orf77A4D0Y5 90 aa12.71□□□□□ -0.37
UBXN1-212ENST00000531625 GAGE12JA6NER3 117 aa12.71□□□□□ -0.37
UBXN1-212ENST00000531625 GAGE1Q13065 139 aa12.71□□□□□ -0.37
UBXN1-212ENST00000531625 GAGE4Q13068 117 aa12.71□□□□□ -0.37
UBXN1-212ENST00000531625 GAGE5Q13069 117 aa12.71□□□□□ -0.37
UBXN1-212ENST00000531625 RHEBQ15382 184 aa12.71□□□□□ -0.37
UBXN1-212ENST00000531625 GAGE13Q4V321 117 aa12.71□□□□□ -0.37
UBXN1-212ENST00000531625 MRPL54Q6P161 138 aaKnown RBP12.71□□□□□ -0.37
UBXN1-212ENST00000531625 SVBPQ8N300 66 aa12.71□□□□□ -0.37
UBXN1-212ENST00000531625 SUMO4Q6EEV6 95 aa12.7□□□□□ -0.38
UBXN1-212ENST00000531625 RPS10P5Q9NQ39 176 aa12.7□□□□□ -0.38
UBXN1-212ENST00000531625 Q9UF83 564 aa12.7□□□□□ -0.38
UBXN1-212ENST00000531625 KRTAP29-1A8MX34 341 aaPredicted RBP12.69□□□□□ -0.38
UBXN1-212ENST00000531625 CAMPP49913 170 aa12.69□□□□□ -0.38
UBXN1-212ENST00000531625 TRBV10-1A0A0K0K1A3 114 aa12.68□□□□□ -0.38
UBXN1-212ENST00000531625 A0A1B0GW15 77 aa12.68□□□□□ -0.38
UBXN1-212ENST00000531625 SNAPINO95295 136 aa12.68□□□□□ -0.38
UBXN1-212ENST00000531625 PLA2G1BP04054 148 aaKnown RBP12.68□□□□□ -0.38
UBXN1-212ENST00000531625 KCNIP4Q6PIL6 250 aa12.68□□□□□ -0.38
UBXN1-212ENST00000531625 TMEM191AQ9H0A3 160 aa12.68□□□□□ -0.38
UBXN1-212ENST00000531625 A0A087WWC5 75 aa12.67□□□□□ -0.38
UBXN1-212ENST00000531625 H7C1H1 209 aa12.67□□□□□ -0.38
UBXN1-212ENST00000531625 HBBP68871 147 aa12.67□□□□□ -0.38
UBXN1-212ENST00000531625 RPL36AP83881 106 aaKnown RBP12.67□□□□□ -0.38
UBXN1-212ENST00000531625 ATP5L2Q7Z4Y8 100 aa12.67□□□□□ -0.38
UBXN1-212ENST00000531625 RPL36ALQ969Q0 106 aaKnown RBP12.67□□□□□ -0.38
UBXN1-212ENST00000531625 IMMP2LQ96T52 175 aa12.67□□□□□ -0.38
UBXN1-212ENST00000531625 TRAV8-6A0A0B4J262 113 aa12.66□□□□□ -0.38
UBXN1-212ENST00000531625 TRAV26-2A0A0B4J265 109 aa12.66□□□□□ -0.38
UBXN1-212ENST00000531625 M0QY20 66 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.6 ms