RNA–Protein interactions for RNA: ENST00000531043.1

HIF3A-214, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-214ENST00000531043 UBE2G1P62253 170 aa8.43□□□□□ -1.06
HIF3A-214ENST00000531043 GFRA4Q9GZZ7 299 aa8.43□□□□□ -1.06
HIF3A-214ENST00000531043 A0A087WYN8 130 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 A0A0D9SG52 128 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 MAP1LC3B2A6NCE7 125 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 DEFA1P59665 94 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 CST9LP1Q5W188 147 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 C20orf203Q8NBC4 194 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 DERL1Q9BUN8 251 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 NKX6-2Q9C056 277 aaPredicted RBP8.42□□□□□ -1.06
HIF3A-214ENST00000531043 MAP1LC3BQ9GZQ8 125 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 VAX2Q9UIW0 290 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 KIF25-AS1Q9Y6Z4 181 aa8.42□□□□□ -1.06
HIF3A-214ENST00000531043 hDV102S1A0JD36 115 aa8.41□□□□□ -1.06
HIF3A-214ENST00000531043 F5H697 171 aa8.41□□□□□ -1.06
HIF3A-214ENST00000531043 SNAI2O43623 268 aa8.41□□□□□ -1.06
HIF3A-214ENST00000531043 AKR1C3P42330 323 aa8.41□□□□□ -1.06
HIF3A-214ENST00000531043 CNBPP62633 177 aaKnown RBP8.41□□□□□ -1.06
HIF3A-214ENST00000531043 AKR1C8PQ5T2L2 129 aa8.41□□□□□ -1.06
HIF3A-214ENST00000531043 ZNF471Q9BX82 626 aaPredicted RBP8.41□□□□□ -1.06
HIF3A-214ENST00000531043 IGLV4-60A0A075B6I1 120 aa8.4□□□□□ -1.06
HIF3A-214ENST00000531043 FXYD6-FXYD2A0A087WZ82 144 aa8.4□□□□□ -1.06
HIF3A-214ENST00000531043 BORCS7-ASMTA0A0B4J1R7 106 aa8.4□□□□□ -1.06
HIF3A-214ENST00000531043 A6NHS1 94 aa8.4□□□□□ -1.06
HIF3A-214ENST00000531043 FHITP49789 147 aa8.4□□□□□ -1.06
HIF3A-214ENST00000531043 RAB5CP51148 216 aa8.4□□□□□ -1.06
HIF3A-214ENST00000531043 SPACA4Q8TDM5 124 aa8.4□□□□□ -1.06
HIF3A-214ENST00000531043 SSBP4Q9BWG4 385 aaPredicted RBP8.4□□□□□ -1.06
HIF3A-214ENST00000531043 MED28Q9H204 178 aa8.4□□□□□ -1.06
HIF3A-214ENST00000531043 TRBV25-1A0A075B6N4 114 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 PHOX2AO14813 284 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 PAGE4O60829 102 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 PKIAP61925 76 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 REG3AQ06141 175 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 IQCJQ1A5X6 159 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 SPANXN1Q5VSR9 72 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 INO80EQ8NBZ0 244 aaPredicted RBP8.39□□□□□ -1.07
HIF3A-214ENST00000531043 CLRN3Q8NCR9 226 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 DPH3Q96FX2 82 aa8.39□□□□□ -1.07
HIF3A-214ENST00000531043 IGHV3-64A0A075B6Q5 118 aa8.38□□□□□ -1.07
HIF3A-214ENST00000531043 SCO2A0A1W2PP80 73 aa8.38□□□□□ -1.07
HIF3A-214ENST00000531043 G3V3Q6 166 aa8.38□□□□□ -1.07
HIF3A-214ENST00000531043 CXCL1P09341 107 aa8.38□□□□□ -1.07
HIF3A-214ENST00000531043 OR5AL1P0C617 328 aa8.38□□□□□ -1.07
HIF3A-214ENST00000531043 STOML3Q8TAV4 291 aa8.38□□□□□ -1.07
HIF3A-214ENST00000531043 MLST8Q9BVC4 326 aa8.38□□□□□ -1.07
HIF3A-214ENST00000531043 CYTL1Q9NRR1 136 aa8.38□□□□□ -1.07
HIF3A-214ENST00000531043 IGHV1-24A0A0C4DH33 117 aa8.37□□□□□ -1.07
HIF3A-214ENST00000531043 GIPP09681 153 aaPredicted RBP8.37□□□□□ -1.07
HIF3A-214ENST00000531043 TMEM97Q5BJF2 176 aa8.37□□□□□ -1.07
HIF3A-214ENST00000531043 PLAC8Q9NZF1 115 aa8.37□□□□□ -1.07
HIF3A-214ENST00000531043 A0A1B0GV50 99 aa8.36□□□□□ -1.07
HIF3A-214ENST00000531043 M0QY20 66 aa8.36□□□□□ -1.07
HIF3A-214ENST00000531043 GZMBP10144 247 aa8.36□□□□□ -1.07
HIF3A-214ENST00000531043 BAGE2Q86Y30 109 aa8.36□□□□□ -1.07
HIF3A-214ENST00000531043 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.36□□□□□ -1.07
HIF3A-214ENST00000531043 TCEAL7Q9BRU2 100 aa8.36□□□□□ -1.07
HIF3A-214ENST00000531043 MGPP08493 103 aa8.35□□□□□ -1.07
HIF3A-214ENST00000531043 SUMO4Q6EEV6 95 aa8.35□□□□□ -1.07
HIF3A-214ENST00000531043 C15orf56Q8N910 161 aa8.35□□□□□ -1.07
HIF3A-214ENST00000531043 RNF185Q96GF1 192 aa8.35□□□□□ -1.07
HIF3A-214ENST00000531043 NKX2-5P52952 324 aaPredicted RBP8.34□□□□□ -1.07
HIF3A-214ENST00000531043 COX6A2Q02221 97 aa8.34□□□□□ -1.07
HIF3A-214ENST00000531043 PRSS3P2Q8NHM4 247 aa8.34□□□□□ -1.07
HIF3A-214ENST00000531043 LINC01600Q96MT4 127 aa8.34□□□□□ -1.07
HIF3A-214ENST00000531043 AP1S3Q96PC3 154 aa8.34□□□□□ -1.07
HIF3A-214ENST00000531043 TMEM243Q9BU79 118 aa8.34□□□□□ -1.07
HIF3A-214ENST00000531043 AP5S1Q9NUS5 200 aa8.34□□□□□ -1.07
HIF3A-214ENST00000531043 TRAV8-4A0A0B4J246 113 aa8.33□□□□□ -1.08
HIF3A-214ENST00000531043 P01737 135 aa8.33□□□□□ -1.08
HIF3A-214ENST00000531043 SMIM17P0DL12 118 aa8.33□□□□□ -1.08
HIF3A-214ENST00000531043 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
HIF3A-214ENST00000531043 HIGD2BQ4VC39 106 aa8.33□□□□□ -1.08
HIF3A-214ENST00000531043 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.32□□□□□ -1.08
HIF3A-214ENST00000531043 IGKV2-24A0A0C4DH68 120 aa8.32□□□□□ -1.08
HIF3A-214ENST00000531043 A0A1B0GUV1 79 aa8.32□□□□□ -1.08
HIF3A-214ENST00000531043 MAJINQ3KP22 176 aa8.32□□□□□ -1.08
HIF3A-214ENST00000531043 SFT2D1Q8WV19 159 aa8.32□□□□□ -1.08
HIF3A-214ENST00000531043 GTSF1Q8WW33 167 aa8.32□□□□□ -1.08
HIF3A-214ENST00000531043 TPPP3Q9BW30 176 aa8.32□□□□□ -1.08
HIF3A-214ENST00000531043 GAGE12HA6NDE8 117 aa8.31□□□□□ -1.08
HIF3A-214ENST00000531043 SMLR1H3BR10 107 aa8.31□□□□□ -1.08
HIF3A-214ENST00000531043 ARPC5O15511 151 aa8.31□□□□□ -1.08
HIF3A-214ENST00000531043 S100A9P06702 114 aaKnown RBP8.31□□□□□ -1.08
HIF3A-214ENST00000531043 IGLC6P0CF74 106 aa8.31□□□□□ -1.08
HIF3A-214ENST00000531043 LYPD6BQ8NI32 183 aa8.31□□□□□ -1.08
HIF3A-214ENST00000531043 FAM213BQ8TBF2 198 aa8.31□□□□□ -1.08
HIF3A-214ENST00000531043 C7orf33Q8WU49 177 aa8.31□□□□□ -1.08
HIF3A-214ENST00000531043 MBD3L1Q8WWY6 194 aa8.31□□□□□ -1.08
HIF3A-214ENST00000531043 IGKV3OR2-268A0A0C4DH90 116 aa8.3□□□□□ -1.08
HIF3A-214ENST00000531043 KRTAP10-8P60410 259 aa8.3□□□□□ -1.08
HIF3A-214ENST00000531043 TMUB2Q71RG4 321 aa8.3□□□□□ -1.08
HIF3A-214ENST00000531043 DPH3P1Q9H4G8 78 aa8.3□□□□□ -1.08
HIF3A-214ENST00000531043 A0A0J9YXV3 536 aa8.29□□□□□ -1.08
HIF3A-214ENST00000531043 RPL35P42766 123 aaKnown RBP8.29□□□□□ -1.08
HIF3A-214ENST00000531043 RPS10P46783 165 aaKnown RBP8.29□□□□□ -1.08
HIF3A-214ENST00000531043 SULT1A2P50226 295 aa8.29□□□□□ -1.08
HIF3A-214ENST00000531043 WDR73Q6P4I2 378 aa8.29□□□□□ -1.08
HIF3A-214ENST00000531043 RASL11AQ6T310 242 aa8.29□□□□□ -1.08
HIF3A-214ENST00000531043 FER1L6-AS1Q8NA97 138 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms