RNA–Protein interactions for RNA: ENST00000530917.5

UBASH3B-207, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 5

Gene UBASH3B, Length 987 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-207ENST00000530917 NIT2Q9NQR4 276 aa8.49□□□□□ -1.05
UBASH3B-207ENST00000530917 TENM3Q9P273 2699 aa8.49□□□□□ -1.05
UBASH3B-207ENST00000530917 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
UBASH3B-207ENST00000530917 TRBV6-4A0A1B0GX49 114 aa8.48□□□□□ -1.05
UBASH3B-207ENST00000530917 ATP5G1P05496 136 aa8.48□□□□□ -1.05
UBASH3B-207ENST00000530917 RPL39LQ96EH5 51 aaKnown RBP8.48□□□□□ -1.05
UBASH3B-207ENST00000530917 C20orf78Q9BR46 151 aa8.48□□□□□ -1.05
UBASH3B-207ENST00000530917 TRBV10-1A0A0K0K1A3 114 aa8.47□□□□□ -1.05
UBASH3B-207ENST00000530917 NDUFA6P56556 154 aa8.47□□□□□ -1.05
UBASH3B-207ENST00000530917 SLC25A29Q8N8R3 303 aa8.47□□□□□ -1.05
UBASH3B-207ENST00000530917 C11orf45Q8TAV5 145 aa8.47□□□□□ -1.05
UBASH3B-207ENST00000530917 DNAJC30Q96LL9 226 aa8.47□□□□□ -1.05
UBASH3B-207ENST00000530917 MAP1LC3AQ9H492 121 aa8.47□□□□□ -1.05
UBASH3B-207ENST00000530917 HHLA3Q9XRX5 114 aa8.47□□□□□ -1.05
UBASH3B-207ENST00000530917 TMA7Q9Y2S6 64 aaKnown RBP8.47□□□□□ -1.05
UBASH3B-207ENST00000530917 K7EQD1 137 aa8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 P0DMU3 169 aa8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 FAM231AP0DMU4 169 aa8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 FAM231CP0DMU5 169 aa8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 HOXA5P20719 270 aa8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 SUMO2P61956 95 aaKnown RBP8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 RPL32P62910 135 aaKnown RBP8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 IQCJQ1A5X6 159 aa8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 COA6Q5JTJ3 125 aaKnown RBP8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 BAGE3Q86Y29 109 aa8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 ST20Q9HBF5 79 aa8.46□□□□□ -1.06
UBASH3B-207ENST00000530917 LOC389332A0A1B0GUA5 103 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 CRYBA4P53673 196 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 POLR2KP53803 58 aaKnown RBP8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 RHOHQ15669 191 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 NIT1Q86X76 327 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 NEXN-AS1Q8NBZ9 246 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 PRSS3P2Q8NHM4 247 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 PRADC1Q9BSG0 188 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 NXT2Q9NPJ8 142 aaKnown RBP8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 Q9UF83 564 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 PRO0255Q9UI72 69 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 TNFRSF18Q9Y5U5 241 aa8.45□□□□□ -1.06
UBASH3B-207ENST00000530917 IGLV2-18A0A075B6J9 118 aa8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 F5H768 121 aa8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 VCYO14598 125 aa8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 S100A6P06703 90 aa8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 IFI27P40305 119 aaPredicted RBP8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 NANOS2P60321 138 aaKnown RBP8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 Q8N8P6 123 aa8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 SMIM2Q9BVW6 85 aa8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 COL7A1Q02388 2944 aa8.44□□□□□ -1.06
UBASH3B-207ENST00000530917 BIRC6Q9NR09 4857 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 TRBV7-3A0A075B6L6 115 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 SDHAF1A6NFY7 115 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 LINC01546A6NGU7 62 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 PAX4O43316 350 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 LINC00614P0C842 121 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 PMCHP20382 165 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 RPL36AP83881 106 aaKnown RBP8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 Q6ZTC4 211 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 RPL36ALQ969Q0 106 aaKnown RBP8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 CHCHD1Q96BP2 118 aaKnown RBP8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 URB1-AS1Q96HZ7 61 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 TMEM70Q9BUB7 260 aa8.43□□□□□ -1.06
UBASH3B-207ENST00000530917 TRBV27A0A0K0K1C4 114 aa8.42□□□□□ -1.06
UBASH3B-207ENST00000530917 SERF1AO75920 110 aa8.42□□□□□ -1.06
UBASH3B-207ENST00000530917 HTN3P15516 51 aa8.42□□□□□ -1.06
UBASH3B-207ENST00000530917 LINC00310P59036 64 aa8.42□□□□□ -1.06
UBASH3B-207ENST00000530917 FA2HQ7L5A8 372 aa8.42□□□□□ -1.06
UBASH3B-207ENST00000530917 ZNRF2Q8NHG8 242 aa8.42□□□□□ -1.06
UBASH3B-207ENST00000530917 LOC100131303A0A0U1RQF7 123 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 GAGE12JA6NER3 117 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 C5orf52A6NGY3 159 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 I3L3M4 83 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 K7EMI3 77 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 NUPR1O60356 82 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 ESDP10768 282 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 GYPEP15421 78 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 UBE2D3P61077 147 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 SNRPEP62304 92 aaKnown RBP8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 UBE2D2P62837 147 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 GAGE1Q13065 139 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 GAGE4Q13068 117 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 GAGE5Q13069 117 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 GAGE13Q4V321 117 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 RNASEKQ6P5S7 137 aaKnown RBP8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 VSIG2Q96IQ7 327 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 AP5S1Q9NUS5 200 aa8.41□□□□□ -1.06
UBASH3B-207ENST00000530917 TRAV26-1A0A087WT03 109 aa8.4□□□□□ -1.06
UBASH3B-207ENST00000530917 DEFB131BA0A096LNP1 70 aa8.4□□□□□ -1.06
UBASH3B-207ENST00000530917 TRAV10A0A0B4J240 114 aa8.4□□□□□ -1.06
UBASH3B-207ENST00000530917 H3BNG1 76 aa8.4□□□□□ -1.06
UBASH3B-207ENST00000530917 LINC00694P0DN24 101 aa8.4□□□□□ -1.06
UBASH3B-207ENST00000530917 DAZ4Q86SG3 579 aaKnown RBP8.4□□□□□ -1.06
UBASH3B-207ENST00000530917 KIR2DL4Q99706 377 aa8.4□□□□□ -1.06
UBASH3B-207ENST00000530917 DAZ3Q9NR90 486 aaKnown RBP8.4□□□□□ -1.06
UBASH3B-207ENST00000530917 A0A0J9YY99 117 aa8.39□□□□□ -1.07
UBASH3B-207ENST00000530917 TCAPO15273 167 aa8.39□□□□□ -1.07
UBASH3B-207ENST00000530917 HSBP1O75506 76 aa8.39□□□□□ -1.07
UBASH3B-207ENST00000530917 LAGE3Q14657 143 aa8.39□□□□□ -1.07
UBASH3B-207ENST00000530917 EPPK1P58107 5090 aaKnown RBP8.39□□□□□ -1.07
UBASH3B-207ENST00000530917 TSHBP01222 138 aa8.38□□□□□ -1.07
UBASH3B-207ENST00000530917 ORMDL2Q53FV1 153 aa8.38□□□□□ -1.07
UBASH3B-207ENST00000530917 NEGR1Q7Z3B1 354 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms