RNA–Protein interactions for RNA: ENST00000529332.5

TM9SF1-208, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5

Gene TM9SF1, Length 2,107 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-208ENST00000529332 MDFICQ9P1T7 246 aa11.68□□□□□ -0.54
TM9SF1-208ENST00000529332 A0A0J9YX75 114 aa11.67□□□□□ -0.54
TM9SF1-208ENST00000529332 A0A1B0GWB2 263 aa11.67□□□□□ -0.54
TM9SF1-208ENST00000529332 C11orf86A6NJI1 115 aa11.67□□□□□ -0.54
TM9SF1-208ENST00000529332 F5H697 171 aa11.67□□□□□ -0.54
TM9SF1-208ENST00000529332 FOXI2Q6ZQN5 318 aa11.67□□□□□ -0.54
TM9SF1-208ENST00000529332 C9orf85Q96MD7 179 aa11.67□□□□□ -0.54
TM9SF1-208ENST00000529332 SDHAF1A6NFY7 115 aa11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 ZNF815PA8K554 130 aa11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 VCYO14598 125 aa11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 EMP1P54849 157 aa11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 PLEKHB2Q96CS7 222 aa11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 LGALS9O00182 355 aa11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 CD300EQ496F6 205 aaPredicted RBP11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 FAM74A4Q5TZK3 123 aa11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 ODF3Q96PU9 254 aa11.66□□□□□ -0.54
TM9SF1-208ENST00000529332 K7EQG2 157 aa11.65□□□□□ -0.54
TM9SF1-208ENST00000529332 RRN3P1Q2M238 152 aa11.65□□□□□ -0.54
TM9SF1-208ENST00000529332 MORN3Q6PF18 240 aaPredicted RBP11.65□□□□□ -0.54
TM9SF1-208ENST00000529332 KLHL30-AS1Q8NEE0 82 aa11.65□□□□□ -0.54
TM9SF1-208ENST00000529332 NDUFA7O95182 113 aa11.65□□□□□ -0.55
TM9SF1-208ENST00000529332 COTL1Q14019 142 aa11.65□□□□□ -0.55
TM9SF1-208ENST00000529332 Q8N1Y9 231 aa11.65□□□□□ -0.55
TM9SF1-208ENST00000529332 KIR2DL4Q99706 377 aa11.65□□□□□ -0.55
TM9SF1-208ENST00000529332 MTORP42345 2549 aa11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 TRBV27A0A0K0K1C4 114 aa11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 TEX48A0A1B0GUV7 120 aa11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 SYNJ2BPP57105 145 aa11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 SNRPD3P62318 126 aaKnown RBP11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 PMVKQ15126 192 aa11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 KHDC1LQ5JSQ8 128 aa11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 FLNBO75369 2602 aaKnown RBP11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 ANK3Q12955 4377 aaKnown RBP11.64□□□□□ -0.55
TM9SF1-208ENST00000529332 TRBV6-5A0A0K0K1A5 114 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 CRLF1O75462 422 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 RPL24P83731 157 aaKnown RBP11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 SPINK13Q1W4C9 94 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 AMTNQ6UX39 209 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 H3BMG7 143 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 M0QY20 66 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 HIVEP1P15822 2718 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 WFDC2Q14508 124 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 LINC01006Q8NI28 216 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 C4orf3Q8WVX3 66 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 TMEM141Q96I45 108 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 TIMM17AQ99595 171 aa11.63□□□□□ -0.55
TM9SF1-208ENST00000529332 SORL1Q92673 2214 aa11.62□□□□□ -0.55
TM9SF1-208ENST00000529332 LINC01549A6NIU2 74 aa11.62□□□□□ -0.55
TM9SF1-208ENST00000529332 SCGB1D4Q6XE38 83 aa11.62□□□□□ -0.55
TM9SF1-208ENST00000529332 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
TM9SF1-208ENST00000529332 IGHV1OR15-1A0A075B7D0 117 aa11.62□□□□□ -0.55
TM9SF1-208ENST00000529332 ZNF56Q15929 161 aa11.61□□□□□ -0.55
TM9SF1-208ENST00000529332 TCTEX1D4Q5JR98 221 aa11.61□□□□□ -0.55
TM9SF1-208ENST00000529332 PAPPA-AS1Q5QFB9 102 aa11.61□□□□□ -0.55
TM9SF1-208ENST00000529332 ZNRF2Q8NHG8 242 aa11.61□□□□□ -0.55
TM9SF1-208ENST00000529332 F8W1H4 67 aa11.6□□□□□ -0.55
TM9SF1-208ENST00000529332 TSPEAR-AS2P59090 65 aa11.6□□□□□ -0.55
TM9SF1-208ENST00000529332 ZNF876PQ49A33 203 aa11.6□□□□□ -0.55
TM9SF1-208ENST00000529332 SYT8Q8NBV8 401 aa11.6□□□□□ -0.55
TM9SF1-208ENST00000529332 NSD1Q96L73 2696 aaPredicted RBP11.6□□□□□ -0.55
TM9SF1-208ENST00000529332 HOXD3P31249 432 aaPredicted RBP11.6□□□□□ -0.55
TM9SF1-208ENST00000529332 HERVK_113P61574 105 aa11.59□□□□□ -0.55
TM9SF1-208ENST00000529332 OPRPNQ99935 248 aaPredicted RBP11.59□□□□□ -0.55
TM9SF1-208ENST00000529332 SPANXB1Q9NS25 103 aaPredicted RBP11.59□□□□□ -0.55
TM9SF1-208ENST00000529332 A0A0J9YY99 117 aa11.59□□□□□ -0.55
TM9SF1-208ENST00000529332 UBE2D1P51668 147 aa11.59□□□□□ -0.55
TM9SF1-208ENST00000529332 SRSF9Q13242 221 aaKnown RBP eCLIP11.59□□□□□ -0.55
TM9SF1-208ENST00000529332 MTURNQ8N3F0 131 aa11.59□□□□□ -0.55
TM9SF1-208ENST00000529332 PGPEP1Q9NXJ5 209 aa11.59□□□□□ -0.55
TM9SF1-208ENST00000529332 P0DMU3 169 aa11.58□□□□□ -0.56
TM9SF1-208ENST00000529332 FAM231AP0DMU4 169 aa11.58□□□□□ -0.56
TM9SF1-208ENST00000529332 FAM231CP0DMU5 169 aa11.58□□□□□ -0.56
TM9SF1-208ENST00000529332 TMEM170BQ5T4T1 132 aa11.58□□□□□ -0.56
TM9SF1-208ENST00000529332 PRO0461Q9UI25 63 aa11.58□□□□□ -0.56
TM9SF1-208ENST00000529332 NSUN5P1Q3KNT7 163 aa11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 TRPT1Q86TN4 253 aaKnown RBP11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 NF1P21359 2839 aa11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 RBMY1A1P0DJD3 496 aaKnown RBP11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 RBMY1CP0DJD4 496 aa11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 CD28P10747 220 aa11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 RBMY1FQ15415 496 aaKnown RBP11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 C18orf65Q6ZTR6 163 aa11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 SH2D6Q7Z4S9 175 aa11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 TSSC4Q9Y5U2 329 aaPredicted RBP11.57□□□□□ -0.56
TM9SF1-208ENST00000529332 TMEM238LA0A1B0GVL6 79 aa11.56□□□□□ -0.56
TM9SF1-208ENST00000529332 A6NJY4 79 aa11.56□□□□□ -0.56
TM9SF1-208ENST00000529332 RHOHQ15669 191 aa11.56□□□□□ -0.56
TM9SF1-208ENST00000529332 DEFB136Q30KP8 78 aa11.56□□□□□ -0.56
TM9SF1-208ENST00000529332 AMELXQ99217 191 aa11.56□□□□□ -0.56
TM9SF1-208ENST00000529332 MRPL16Q9NX20 251 aaKnown RBP11.56□□□□□ -0.56
TM9SF1-208ENST00000529332 GAGE13Q4V321 117 aa11.56□□□□□ -0.56
TM9SF1-208ENST00000529332 PROK1P58294 105 aa11.55□□□□□ -0.56
TM9SF1-208ENST00000529332 ETDBQ3ZM63 59 aa11.55□□□□□ -0.56
TM9SF1-208ENST00000529332 PEMTQ9UBM1 199 aa11.55□□□□□ -0.56
TM9SF1-208ENST00000529332 KNCNA6PVL3 124 aa11.54□□□□□ -0.56
TM9SF1-208ENST00000529332 TSPAN13O95857 204 aa11.54□□□□□ -0.56
TM9SF1-208ENST00000529332 SLURP1P55000 103 aa11.54□□□□□ -0.56
TM9SF1-208ENST00000529332 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
TM9SF1-208ENST00000529332 C11orf44Q8N8P7 122 aa11.54□□□□□ -0.56
TM9SF1-208ENST00000529332 C20orf203Q8NBC4 194 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 177.5 ms