RNA–Protein interactions for RNA: ENST00000529308.5

USP35-203, Transcript of ubiquitin specific peptidase 35, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP35, Length 4,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-203ENST00000529308 NBEAQ8NFP9 2946 aa11.7□□□□□ -0.54
USP35-203ENST00000529308 TMEM243Q9BU79 118 aa11.7□□□□□ -0.54
USP35-203ENST00000529308 DEFB4AO15263 64 aa11.7□□□□□ -0.54
USP35-203ENST00000529308 ZFP2Q6ZN57 461 aa11.7□□□□□ -0.54
USP35-203ENST00000529308 GPHB5Q86YW7 130 aa11.7□□□□□ -0.54
USP35-203ENST00000529308 CITED2Q99967 270 aaPredicted RBP11.7□□□□□ -0.54
USP35-203ENST00000529308 C10orf126Q8N4M7 172 aa11.69□□□□□ -0.54
USP35-203ENST00000529308 K7EP13 123 aa11.69□□□□□ -0.54
USP35-203ENST00000529308 TSSC4Q9Y5U2 329 aaPredicted RBP11.69□□□□□ -0.54
USP35-203ENST00000529308 SMAD5-AS1Q9Y6J3 95 aa11.69□□□□□ -0.54
USP35-203ENST00000529308 AKAP13Q12802 2813 aa11.69□□□□□ -0.54
USP35-203ENST00000529308 FGF6P10767 208 aa11.68□□□□□ -0.54
USP35-203ENST00000529308 CEND1Q8N111 149 aa11.68□□□□□ -0.54
USP35-203ENST00000529308 FXYD2P54710 66 aa11.68□□□□□ -0.54
USP35-203ENST00000529308 ATXN8Q156A1 80 aa11.68□□□□□ -0.54
USP35-203ENST00000529308 CEMP1Q6PRD7 247 aaPredicted RBP11.68□□□□□ -0.54
USP35-203ENST00000529308 SPAG8Q99932 426 aaPredicted RBP11.68□□□□□ -0.54
USP35-203ENST00000529308 A0A1W2PPM0 123 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 P0DMU3 169 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 FAM231AP0DMU4 169 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 FAM231CP0DMU5 169 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 SRSF2Q01130 221 aaKnown RBP11.67□□□□□ -0.54
USP35-203ENST00000529308 C12orf74Q32Q52 190 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 C20orf173Q96LM9 149 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 FRYQ5TBA9 3013 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 TNFRSF13BO14836 293 aaPredicted RBP11.67□□□□□ -0.54
USP35-203ENST00000529308 Q6ZQT7 251 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 ZNF48Q96MX3 618 aaPredicted RBP11.67□□□□□ -0.54
USP35-203ENST00000529308 C5orf38Q86SI9 138 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 DEFB125Q8N687 156 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
USP35-203ENST00000529308 SS18Q15532 418 aa11.66□□□□□ -0.54
USP35-203ENST00000529308 A0A0J9YX75 114 aa11.66□□□□□ -0.54
USP35-203ENST00000529308 CFAP46Q8IYW2 2715 aa11.66□□□□□ -0.54
USP35-203ENST00000529308 ANGP03950 147 aaKnown RBP11.66□□□□□ -0.54
USP35-203ENST00000529308 XCL1P47992 114 aa11.66□□□□□ -0.54
USP35-203ENST00000529308 ADAMTS20P59510 1910 aa11.66□□□□□ -0.54
USP35-203ENST00000529308 FRYLO94915 3013 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 LEPROTO15243 131 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 EBI3Q14213 229 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 DAND5Q8N907 189 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 K7EMT4 169 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 AVPP01185 164 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 MYCNOSP40205 109 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 SCRT2Q9NQ03 307 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 PRO1854Q9UHT4 67 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 AGRNO00468 2067 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 PRM2P04554 102 aa11.65□□□□□ -0.54
USP35-203ENST00000529308 REV3LO60673 3130 aa11.65□□□□□ -0.55
USP35-203ENST00000529308 IGLV2-11P01706 119 aa11.65□□□□□ -0.55
USP35-203ENST00000529308 ODF1Q14990 250 aa11.64□□□□□ -0.55
USP35-203ENST00000529308 IGLV10-54A0A075B6I4 117 aa11.64□□□□□ -0.55
USP35-203ENST00000529308 GAS8-AS1O95177 125 aa11.64□□□□□ -0.55
USP35-203ENST00000529308 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
USP35-203ENST00000529308 TRAV8-4A0A0B4J246 113 aa11.63□□□□□ -0.55
USP35-203ENST00000529308 IGHG4P01861 327 aa11.63□□□□□ -0.55
USP35-203ENST00000529308 SLC25A20O43772 301 aa11.63□□□□□ -0.55
USP35-203ENST00000529308 SH2D6Q7Z4S9 175 aa11.63□□□□□ -0.55
USP35-203ENST00000529308 Q9H8V8 135 aa11.63□□□□□ -0.55
USP35-203ENST00000529308 C11orf86A6NJI1 115 aa11.62□□□□□ -0.55
USP35-203ENST00000529308 MRAPQ8TCY5 172 aa11.62□□□□□ -0.55
USP35-203ENST00000529308 K7EP34 96 aa11.62□□□□□ -0.55
USP35-203ENST00000529308 IGLC6P0CF74 106 aa11.62□□□□□ -0.55
USP35-203ENST00000529308 BOD1L1Q8NFC6 3051 aa11.62□□□□□ -0.55
USP35-203ENST00000529308 BAALCQ8WXS3 180 aa11.61□□□□□ -0.55
USP35-203ENST00000529308 C11orf21Q9P2W6 132 aa11.61□□□□□ -0.55
USP35-203ENST00000529308 MUC4Q99102 2169 aa11.61□□□□□ -0.55
USP35-203ENST00000529308 SPTBN5Q9NRC6 3674 aaKnown RBP11.6□□□□□ -0.55
USP35-203ENST00000529308 DNAJC9-AS1A6NH13 148 aa11.6□□□□□ -0.55
USP35-203ENST00000529308 PIFOQ8TCI5 191 aa11.6□□□□□ -0.55
USP35-203ENST00000529308 GAGE2BQ13066 116 aa11.6□□□□□ -0.55
USP35-203ENST00000529308 GAGE2EQ4V326 116 aa11.6□□□□□ -0.55
USP35-203ENST00000529308 GAGE2DQ9UEU5 116 aa11.6□□□□□ -0.55
USP35-203ENST00000529308 IGHV4-31P0DP07 118 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 RHOHQ15669 191 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 TRBV6-1A0A0K0K1D8 114 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 Q8N6K4 173 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 ZFAND2AQ8N6M9 145 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 LAMTOR3Q9UHA4 124 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 FSTL3O95633 263 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 KRTAP10-9P60411 292 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 EDN2P20800 178 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 DEFB135Q30KP9 77 aa11.59□□□□□ -0.55
USP35-203ENST00000529308 A4D1N5 150 aa11.58□□□□□ -0.56
USP35-203ENST00000529308 C18orf65Q6ZTR6 163 aa11.58□□□□□ -0.56
USP35-203ENST00000529308 TAX1BP3O14907 124 aa11.58□□□□□ -0.56
USP35-203ENST00000529308 SIVA1O15304 175 aa11.58□□□□□ -0.56
USP35-203ENST00000529308 GYPEP15421 78 aa11.58□□□□□ -0.56
USP35-203ENST00000529308 PRR9Q5T870 116 aa11.58□□□□□ -0.56
USP35-203ENST00000529308 BOD1L2Q8IYS8 172 aa11.58□□□□□ -0.56
USP35-203ENST00000529308 ZNF843Q8N446 348 aa11.57□□□□□ -0.56
USP35-203ENST00000529308 ANAPC13Q9BS18 74 aa11.57□□□□□ -0.56
USP35-203ENST00000529308 HERVK_113P63121 156 aa11.56□□□□□ -0.56
USP35-203ENST00000529308 K7EQG2 157 aa11.56□□□□□ -0.56
USP35-203ENST00000529308 LINC00310P59036 64 aa11.56□□□□□ -0.56
USP35-203ENST00000529308 RAI1Q7Z5J4 1906 aaPredicted RBP11.56□□□□□ -0.56
USP35-203ENST00000529308 PROK1P58294 105 aa11.56□□□□□ -0.56
USP35-203ENST00000529308 RNASE8Q8TDE3 154 aaKnown RBP11.56□□□□□ -0.56
USP35-203ENST00000529308 MAP6D1Q9H9H5 199 aa11.56□□□□□ -0.56
USP35-203ENST00000529308 TEX48A0A1B0GUV7 120 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms