RNA–Protein interactions for RNA: ENST00000529307.1

CAPRIN1-207, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CAPRIN1, Length 2,266 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-207ENST00000529307 LINC01546A6NGU7 62 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 LY6G6DO95868 133 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 ASIPP42127 132 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 DEFB1P60022 68 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 MRPL51Q4U2R6 128 aaKnown RBP12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 LYRM7Q5U5X0 104 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 AMN1Q8IY45 258 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 AGRNO00468 2067 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 SNCGO76070 127 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 SPXQ9BT56 116 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 TMEM160Q9NX00 188 aa12.54□□□□□ -0.4
CAPRIN1-207ENST00000529307 SH2D1AO60880 128 aa12.53□□□□□ -0.4
CAPRIN1-207ENST00000529307 A8MWV9 139 aa12.53□□□□□ -0.4
CAPRIN1-207ENST00000529307 SETD2Q9BYW2 2564 aaPredicted RBP12.52□□□□□ -0.41
CAPRIN1-207ENST00000529307 NPYP01303 97 aa12.52□□□□□ -0.41
CAPRIN1-207ENST00000529307 RNASE1P07998 156 aaKnown RBP12.52□□□□□ -0.41
CAPRIN1-207ENST00000529307 SLURP1P55000 103 aa12.52□□□□□ -0.41
CAPRIN1-207ENST00000529307 TPPP3Q9BW30 176 aa12.52□□□□□ -0.41
CAPRIN1-207ENST00000529307 LGALS9O00182 355 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 CKS2P33552 79 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 UBE2D3P61077 147 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 UBE2D2P62837 147 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 DUX3Q96PT4 197 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 MYMXA0A1B0GTQ4 84 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 C9orf47Q6ZRZ4 202 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 ZNF575Q86XF7 245 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 TMEM126AQ9H061 195 aa12.51□□□□□ -0.41
CAPRIN1-207ENST00000529307 LEPP41159 167 aa12.5□□□□□ -0.41
CAPRIN1-207ENST00000529307 FAM159AQ6UWV7 190 aa12.5□□□□□ -0.41
CAPRIN1-207ENST00000529307 DCANP1Q8TF63 244 aa12.5□□□□□ -0.41
CAPRIN1-207ENST00000529307 C4orf3Q8WVX3 66 aa12.5□□□□□ -0.41
CAPRIN1-207ENST00000529307 KHDC1LQ5JSQ8 128 aa12.5□□□□□ -0.41
CAPRIN1-207ENST00000529307 TMSB15BA0A087X1C1 80 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 LOC107984156A0A0G2JMH3 177 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 HILS1P60008 231 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 ARL17AQ8IVW1 177 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 C11orf44Q8N8P7 122 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 PPDPFQ9H3Y8 114 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 F6UB75 175 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 M0QXV9 152 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 TMEM78Q5T7P6 136 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 LYZL1Q6UWQ5 148 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 ANKRD29Q8N6D5 301 aa12.49□□□□□ -0.41
CAPRIN1-207ENST00000529307 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
CAPRIN1-207ENST00000529307 MEIG1Q5JSS6 88 aa12.48□□□□□ -0.41
CAPRIN1-207ENST00000529307 ZFP2Q6ZN57 461 aa12.48□□□□□ -0.41
CAPRIN1-207ENST00000529307 LINC01006Q8NI28 216 aa12.48□□□□□ -0.41
CAPRIN1-207ENST00000529307 HIVEP1P15822 2718 aa12.48□□□□□ -0.41
CAPRIN1-207ENST00000529307 C5orf47Q569G3 176 aa12.48□□□□□ -0.41
CAPRIN1-207ENST00000529307 Q6ZQT7 251 aa12.48□□□□□ -0.41
CAPRIN1-207ENST00000529307 KLHL30-AS1Q8NEE0 82 aa12.48□□□□□ -0.41
CAPRIN1-207ENST00000529307 CD28P10747 220 aa12.47□□□□□ -0.41
CAPRIN1-207ENST00000529307 NXT2Q9NPJ8 142 aaKnown RBP12.47□□□□□ -0.41
CAPRIN1-207ENST00000529307 SMKR1H3BMG3 65 aa12.46□□□□□ -0.41
CAPRIN1-207ENST00000529307 UBE2D1P51668 147 aa12.46□□□□□ -0.41
CAPRIN1-207ENST00000529307 PRR9Q5T870 116 aa12.46□□□□□ -0.41
CAPRIN1-207ENST00000529307 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
CAPRIN1-207ENST00000529307 MRPL35Q9NZE8 188 aaKnown RBP12.46□□□□□ -0.42
CAPRIN1-207ENST00000529307 MDFICQ9P1T7 246 aa12.46□□□□□ -0.42
CAPRIN1-207ENST00000529307 C11orf21Q9P2W6 132 aa12.46□□□□□ -0.42
CAPRIN1-207ENST00000529307 OVOL1O14753 267 aa12.45□□□□□ -0.42
CAPRIN1-207ENST00000529307 NSD1Q96L73 2696 aaPredicted RBP12.45□□□□□ -0.42
CAPRIN1-207ENST00000529307 TCL1BO95988 128 aa12.45□□□□□ -0.42
CAPRIN1-207ENST00000529307 OR10J6PQ8NGY7 276 aa12.45□□□□□ -0.42
CAPRIN1-207ENST00000529307 RASL10AQ92737 203 aa12.45□□□□□ -0.42
CAPRIN1-207ENST00000529307 SETXQ7Z333 2677 aaKnown RBP12.45□□□□□ -0.42
CAPRIN1-207ENST00000529307 CRLF1O75462 422 aa12.44□□□□□ -0.42
CAPRIN1-207ENST00000529307 SCGB1C2P0DMR2 95 aa12.44□□□□□ -0.42
CAPRIN1-207ENST00000529307 PLNP26678 52 aa12.44□□□□□ -0.42
CAPRIN1-207ENST00000529307 INAFM1C9JVW0 142 aa12.44□□□□□ -0.42
CAPRIN1-207ENST00000529307 LINC00477Q96M19 166 aa12.44□□□□□ -0.42
CAPRIN1-207ENST00000529307 CSDC2Q9Y534 153 aaKnown RBP12.44□□□□□ -0.42
CAPRIN1-207ENST00000529307 FLNBO75369 2602 aaKnown RBP12.43□□□□□ -0.42
CAPRIN1-207ENST00000529307 A0A1W2PRX2 142 aa12.43□□□□□ -0.42
CAPRIN1-207ENST00000529307 H3BVH4 76 aa12.43□□□□□ -0.42
CAPRIN1-207ENST00000529307 ORM1P02763 201 aa12.43□□□□□ -0.42
CAPRIN1-207ENST00000529307 ZFAND2AQ8N6M9 145 aa12.43□□□□□ -0.42
CAPRIN1-207ENST00000529307 FAM19A4Q96LR4 140 aa12.43□□□□□ -0.42
CAPRIN1-207ENST00000529307 IGKV3D-20A0A0C4DH25 116 aa12.42□□□□□ -0.42
CAPRIN1-207ENST00000529307 K7EQG2 157 aa12.42□□□□□ -0.42
CAPRIN1-207ENST00000529307 CITED2Q99967 270 aaPredicted RBP12.42□□□□□ -0.42
CAPRIN1-207ENST00000529307 SRSF2Q01130 221 aaKnown RBP12.42□□□□□ -0.42
CAPRIN1-207ENST00000529307 FN1P02751 2386 aaKnown RBP12.42□□□□□ -0.42
CAPRIN1-207ENST00000529307 IGLC6P0CF74 106 aa12.41□□□□□ -0.42
CAPRIN1-207ENST00000529307 SFTA2Q6UW10 78 aa12.41□□□□□ -0.42
CAPRIN1-207ENST00000529307 LENEPQ9Y5L5 61 aa12.41□□□□□ -0.42
CAPRIN1-207ENST00000529307 SORL1Q92673 2214 aa12.4□□□□□ -0.42
CAPRIN1-207ENST00000529307 DNAJC30Q96LL9 226 aa12.4□□□□□ -0.42
CAPRIN1-207ENST00000529307 RNF185Q96GF1 192 aa12.39□□□□□ -0.43
CAPRIN1-207ENST00000529307 SLC25A20O43772 301 aa12.39□□□□□ -0.43
CAPRIN1-207ENST00000529307 NDUFA7O95182 113 aa12.39□□□□□ -0.43
CAPRIN1-207ENST00000529307 TNFRSF6BO95407 300 aa12.39□□□□□ -0.43
CAPRIN1-207ENST00000529307 CD7P09564 240 aa12.39□□□□□ -0.43
CAPRIN1-207ENST00000529307 Q8N8P6 123 aa12.39□□□□□ -0.43
CAPRIN1-207ENST00000529307 PEMTQ9UBM1 199 aa12.39□□□□□ -0.43
CAPRIN1-207ENST00000529307 CCL24O00175 119 aa12.37□□□□□ -0.43
CAPRIN1-207ENST00000529307 PROK1P58294 105 aa12.37□□□□□ -0.43
CAPRIN1-207ENST00000529307 NDUFA11Q86Y39 141 aa12.37□□□□□ -0.43
CAPRIN1-207ENST00000529307 APRG1Q8IVJ8 170 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms