RNA–Protein interactions for RNA: ENST00000529205.1

HIF3A-212, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-212ENST00000529205 HIST1H2BAQ96A08 127 aa8.61□□□□□ -1.03
HIF3A-212ENST00000529205 NKX6-2Q9C056 277 aaPredicted RBP8.61□□□□□ -1.03
HIF3A-212ENST00000529205 PRR34Q9NV39 138 aa8.61□□□□□ -1.03
HIF3A-212ENST00000529205 TMSB15BA0A087X1C1 80 aa8.6□□□□□ -1.03
HIF3A-212ENST00000529205 PEX7O00628 323 aa8.6□□□□□ -1.03
HIF3A-212ENST00000529205 ATP6V0CP27449 155 aa8.6□□□□□ -1.03
HIF3A-212ENST00000529205 UBE2G1P62253 170 aa8.6□□□□□ -1.03
HIF3A-212ENST00000529205 CNBPP62633 177 aaKnown RBP8.6□□□□□ -1.03
HIF3A-212ENST00000529205 CLPSL2Q6UWE3 100 aa8.6□□□□□ -1.03
HIF3A-212ENST00000529205 LINC00269Q8N2A0 174 aa8.6□□□□□ -1.03
HIF3A-212ENST00000529205 NEXN-AS1Q8NBZ9 246 aa8.6□□□□□ -1.03
HIF3A-212ENST00000529205 PKHD1L1Q86WI1 4243 aa8.59□□□□□ -1.03
HIF3A-212ENST00000529205 TRBV25-1A0A075B6N4 114 aa8.59□□□□□ -1.03
HIF3A-212ENST00000529205 A0A087WYN8 130 aa8.59□□□□□ -1.03
HIF3A-212ENST00000529205 BCL2L11O43521 198 aa8.59□□□□□ -1.03
HIF3A-212ENST00000529205 CRIP1P50238 77 aa8.59□□□□□ -1.03
HIF3A-212ENST00000529205 LINC01559Q495D7 138 aa8.59□□□□□ -1.03
HIF3A-212ENST00000529205 TRAV8-4A0A0B4J246 113 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 F5H697 171 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 P01737 135 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 UBE2G2P60604 165 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 RBX1P62877 108 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 REG3AQ06141 175 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 FMC1Q96HJ9 113 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 LINC01600Q96MT4 127 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 DERL1Q9BUN8 251 aa8.58□□□□□ -1.04
HIF3A-212ENST00000529205 GZMBP10144 247 aa8.57□□□□□ -1.04
HIF3A-212ENST00000529205 GAGE6Q13070 117 aa8.57□□□□□ -1.04
HIF3A-212ENST00000529205 ZNF726P1Q15940 193 aa8.57□□□□□ -1.04
HIF3A-212ENST00000529205 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
HIF3A-212ENST00000529205 ZNF471Q9BX82 626 aaPredicted RBP8.57□□□□□ -1.04
HIF3A-212ENST00000529205 IGLV10-54A0A075B6I4 117 aa8.56□□□□□ -1.04
HIF3A-212ENST00000529205 TRBV6-1A0A0K0K1D8 114 aa8.56□□□□□ -1.04
HIF3A-212ENST00000529205 PHOX2AO14813 284 aa8.56□□□□□ -1.04
HIF3A-212ENST00000529205 PRR27Q6MZM9 219 aa8.56□□□□□ -1.04
HIF3A-212ENST00000529205 KRTAP26-1Q6PEX3 210 aa8.56□□□□□ -1.04
HIF3A-212ENST00000529205 SPACA4Q8TDM5 124 aa8.56□□□□□ -1.04
HIF3A-212ENST00000529205 SMIM17P0DL12 118 aa8.55□□□□□ -1.04
HIF3A-212ENST00000529205 SPANXN1Q5VSR9 72 aa8.55□□□□□ -1.04
HIF3A-212ENST00000529205 GTSF1Q8WW33 167 aa8.55□□□□□ -1.04
HIF3A-212ENST00000529205 PLAC8Q9NZF1 115 aa8.55□□□□□ -1.04
HIF3A-212ENST00000529205 VAX2Q9UIW0 290 aa8.55□□□□□ -1.04
HIF3A-212ENST00000529205 RNF213Q63HN8 5207 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 IGHV1-24A0A0C4DH33 117 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 CTXND1A0A1B0GTU2 59 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 FAM74A7A6NL05 159 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 CHTF8P0CG12 524 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 FHITP49789 147 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 WDR73Q6P4I2 378 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 NTM-AS1Q6ZSK4 140 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 STOML3Q8TAV4 291 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 KIF25-AS1Q9Y6Z4 181 aa8.54□□□□□ -1.04
HIF3A-212ENST00000529205 BORCS7-ASMTA0A0B4J1R7 106 aa8.53□□□□□ -1.04
HIF3A-212ENST00000529205 IQCJQ1A5X6 159 aa8.53□□□□□ -1.04
HIF3A-212ENST00000529205 CFAP161Q6P656 301 aa8.53□□□□□ -1.04
HIF3A-212ENST00000529205 REG3GQ6UW15 175 aa8.53□□□□□ -1.04
HIF3A-212ENST00000529205 TCEAL7Q9BRU2 100 aa8.53□□□□□ -1.04
HIF3A-212ENST00000529205 A0A0J9YXV3 536 aa8.52□□□□□ -1.05
HIF3A-212ENST00000529205 KANTRA0A1W2PQU2 76 aa8.52□□□□□ -1.05
HIF3A-212ENST00000529205 PFDN1O60925 122 aa8.52□□□□□ -1.05
HIF3A-212ENST00000529205 LTAP01374 205 aa8.52□□□□□ -1.05
HIF3A-212ENST00000529205 LRP2P98164 4655 aa8.52□□□□□ -1.05
HIF3A-212ENST00000529205 OR10AG1Q8NH19 301 aa8.52□□□□□ -1.05
HIF3A-212ENST00000529205 H7C1H1 209 aa8.51□□□□□ -1.05
HIF3A-212ENST00000529205 NDUFS6O75380 124 aaKnown RBP8.51□□□□□ -1.05
HIF3A-212ENST00000529205 CXCL1P09341 107 aa8.51□□□□□ -1.05
HIF3A-212ENST00000529205 AKR1C3P42330 323 aa8.51□□□□□ -1.05
HIF3A-212ENST00000529205 RAB5CP51148 216 aa8.51□□□□□ -1.05
HIF3A-212ENST00000529205 MAJINQ3KP22 176 aa8.51□□□□□ -1.05
HIF3A-212ENST00000529205 A0A1B0GUV1 79 aa8.5□□□□□ -1.05
HIF3A-212ENST00000529205 RPS10P46783 165 aaKnown RBP8.5□□□□□ -1.05
HIF3A-212ENST00000529205 SSTP61278 116 aa8.5□□□□□ -1.05
HIF3A-212ENST00000529205 PRR3P79522 188 aaKnown RBP8.5□□□□□ -1.05
HIF3A-212ENST00000529205 COX6A2Q02221 97 aa8.5□□□□□ -1.05
HIF3A-212ENST00000529205 AKR1C8PQ5T2L2 129 aa8.5□□□□□ -1.05
HIF3A-212ENST00000529205 CST9LP1Q5W188 147 aa8.5□□□□□ -1.05
HIF3A-212ENST00000529205 SPINK6Q6UWN8 80 aa8.5□□□□□ -1.05
HIF3A-212ENST00000529205 SLC51BQ86UW2 128 aa8.5□□□□□ -1.05
HIF3A-212ENST00000529205 AP1S3Q96PC3 154 aa8.5□□□□□ -1.05
HIF3A-212ENST00000529205 UBE2L6O14933 153 aa8.49□□□□□ -1.05
HIF3A-212ENST00000529205 SNAI2O43623 268 aa8.49□□□□□ -1.05
HIF3A-212ENST00000529205 SLPIP03973 132 aa8.49□□□□□ -1.05
HIF3A-212ENST00000529205 S100A9P06702 114 aaKnown RBP8.49□□□□□ -1.05
HIF3A-212ENST00000529205 OR5AL1P0C617 328 aa8.49□□□□□ -1.05
HIF3A-212ENST00000529205 SULT1A2P50226 295 aa8.49□□□□□ -1.05
HIF3A-212ENST00000529205 STPG4Q8N801 248 aa8.49□□□□□ -1.05
HIF3A-212ENST00000529205 C20orf203Q8NBC4 194 aa8.49□□□□□ -1.05
HIF3A-212ENST00000529205 TMEM243Q9BU79 118 aa8.49□□□□□ -1.05
HIF3A-212ENST00000529205 SSBP4Q9BWG4 385 aaPredicted RBP8.49□□□□□ -1.05
HIF3A-212ENST00000529205 IGKV2-24A0A0C4DH68 120 aa8.48□□□□□ -1.05
HIF3A-212ENST00000529205 MUC21A0A0G2JKD1 596 aa8.48□□□□□ -1.05
HIF3A-212ENST00000529205 MUC21A0A140T8X8 626 aa8.48□□□□□ -1.05
HIF3A-212ENST00000529205 GAS8-AS1O95177 125 aa8.48□□□□□ -1.05
HIF3A-212ENST00000529205 LYPD6BQ8NI32 183 aa8.48□□□□□ -1.05
HIF3A-212ENST00000529205 PKIGQ9Y2B9 76 aa8.48□□□□□ -1.05
HIF3A-212ENST00000529205 MAP1LC3B2A6NCE7 125 aa8.47□□□□□ -1.05
HIF3A-212ENST00000529205 MGPP08493 103 aa8.47□□□□□ -1.05
HIF3A-212ENST00000529205 KRTAP10-8P60410 259 aa8.47□□□□□ -1.05
HIF3A-212ENST00000529205 CCL20P78556 96 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms