RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 IFNA7P01567 189 aa11.76□□□□□ -0.53
SSRP1-204ENST00000529002 UBE2G2P60604 165 aa11.76□□□□□ -0.53
SSRP1-204ENST00000529002 C15orf56Q8N910 161 aa11.76□□□□□ -0.53
SSRP1-204ENST00000529002 OR10AG1Q8NH19 301 aa11.76□□□□□ -0.53
SSRP1-204ENST00000529002 TMEM167BQ9NRX6 74 aa11.76□□□□□ -0.53
SSRP1-204ENST00000529002 TRBV25-1A0A075B6N4 114 aa11.75□□□□□ -0.53
SSRP1-204ENST00000529002 KRTAP9-6A0A140TA67 174 aa11.75□□□□□ -0.53
SSRP1-204ENST00000529002 PEX7O00628 323 aa11.75□□□□□ -0.53
SSRP1-204ENST00000529002 LINC01559Q495D7 138 aa11.75□□□□□ -0.53
SSRP1-204ENST00000529002 HIGD2BQ4VC39 106 aa11.75□□□□□ -0.53
SSRP1-204ENST00000529002 FAM162BQ5T6X4 162 aa11.75□□□□□ -0.53
SSRP1-204ENST00000529002 VAX2Q9UIW0 290 aa11.75□□□□□ -0.53
SSRP1-204ENST00000529002 A0A096LNI7 61 aa11.74□□□□□ -0.53
SSRP1-204ENST00000529002 F5H697 171 aa11.74□□□□□ -0.53
SSRP1-204ENST00000529002 NDUFS6O75380 124 aaKnown RBP11.74□□□□□ -0.53
SSRP1-204ENST00000529002 CXorf1O96002 111 aa11.74□□□□□ -0.53
SSRP1-204ENST00000529002 SSTP61278 116 aa11.74□□□□□ -0.53
SSRP1-204ENST00000529002 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.74□□□□□ -0.53
SSRP1-204ENST00000529002 INO80EQ8NBZ0 244 aaPredicted RBP11.74□□□□□ -0.53
SSRP1-204ENST00000529002 A0A1W2PRE2 83 aa11.73□□□□□ -0.53
SSRP1-204ENST00000529002 ZNF674Q2M3X9 581 aa11.73□□□□□ -0.53
SSRP1-204ENST00000529002 TRAV8-4A0A0B4J246 113 aa11.72□□□□□ -0.53
SSRP1-204ENST00000529002 P01737 135 aa11.72□□□□□ -0.53
SSRP1-204ENST00000529002 RPS10P46783 165 aaKnown RBP11.72□□□□□ -0.53
SSRP1-204ENST00000529002 IQCJQ1A5X6 159 aa11.72□□□□□ -0.53
SSRP1-204ENST00000529002 TMEM97Q5BJF2 176 aa11.72□□□□□ -0.53
SSRP1-204ENST00000529002 MUC2Q02817 5179 aa11.72□□□□□ -0.53
SSRP1-204ENST00000529002 ATP6V0CP27449 155 aa11.71□□□□□ -0.53
SSRP1-204ENST00000529002 MZT2BQ6NZ67 158 aa11.71□□□□□ -0.53
SSRP1-204ENST00000529002 COX8CQ7Z4L0 72 aa11.71□□□□□ -0.53
SSRP1-204ENST00000529002 IGHV1-24A0A0C4DH33 117 aa11.7□□□□□ -0.54
SSRP1-204ENST00000529002 GAGE12HA6NDE8 117 aa11.7□□□□□ -0.54
SSRP1-204ENST00000529002 H7C1H1 209 aa11.7□□□□□ -0.54
SSRP1-204ENST00000529002 PET100P0DJ07 73 aa11.69□□□□□ -0.54
SSRP1-204ENST00000529002 ZNF726P1Q15940 193 aa11.69□□□□□ -0.54
SSRP1-204ENST00000529002 CCDC32Q9BV29 185 aa11.69□□□□□ -0.54
SSRP1-204ENST00000529002 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
SSRP1-204ENST00000529002 ZFP30Q9Y2G7 519 aa11.69□□□□□ -0.54
SSRP1-204ENST00000529002 ZNF471Q9BX82 626 aaPredicted RBP11.68□□□□□ -0.54
SSRP1-204ENST00000529002 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
SSRP1-204ENST00000529002 FAM74A7A6NL05 159 aa11.67□□□□□ -0.54
SSRP1-204ENST00000529002 ENKURQ8TC29 256 aa11.67□□□□□ -0.54
SSRP1-204ENST00000529002 AQP10Q96PS8 301 aa11.67□□□□□ -0.54
SSRP1-204ENST00000529002 PSMG3Q9BT73 122 aaPredicted RBP11.67□□□□□ -0.54
SSRP1-204ENST00000529002 GZMBP10144 247 aa11.66□□□□□ -0.54
SSRP1-204ENST00000529002 Q6ZRP5 223 aa11.66□□□□□ -0.54
SSRP1-204ENST00000529002 HIST1H2BAQ96A08 127 aa11.66□□□□□ -0.54
SSRP1-204ENST00000529002 A0A1B0GUV1 79 aa11.65□□□□□ -0.54
SSRP1-204ENST00000529002 INMT-MINDY4F8WBC2 141 aa11.65□□□□□ -0.54
SSRP1-204ENST00000529002 SULT1A2P50226 295 aa11.65□□□□□ -0.54
SSRP1-204ENST00000529002 UBE2G1P62253 170 aa11.65□□□□□ -0.54
SSRP1-204ENST00000529002 TMEM243Q9BU79 118 aa11.65□□□□□ -0.54
SSRP1-204ENST00000529002 A6NHS1 94 aa11.64□□□□□ -0.55
SSRP1-204ENST00000529002 SSNA1O43805 119 aa11.64□□□□□ -0.55
SSRP1-204ENST00000529002 LTAP01374 205 aa11.64□□□□□ -0.55
SSRP1-204ENST00000529002 MBP02144 154 aa11.64□□□□□ -0.55
SSRP1-204ENST00000529002 SPANXN1Q5VSR9 72 aa11.64□□□□□ -0.55
SSRP1-204ENST00000529002 LINC00526Q96FQ7 95 aa11.64□□□□□ -0.55
SSRP1-204ENST00000529002 FMC1Q96HJ9 113 aa11.64□□□□□ -0.55
SSRP1-204ENST00000529002 SNAI2O43623 268 aa11.63□□□□□ -0.55
SSRP1-204ENST00000529002 CFAP161Q6P656 301 aa11.63□□□□□ -0.55
SSRP1-204ENST00000529002 TNFSF18Q9UNG2 199 aa11.63□□□□□ -0.55
SSRP1-204ENST00000529002 M0QY20 66 aa11.62□□□□□ -0.55
SSRP1-204ENST00000529002 MGPP08493 103 aa11.62□□□□□ -0.55
SSRP1-204ENST00000529002 NKX2-5P52952 324 aaPredicted RBP11.62□□□□□ -0.55
SSRP1-204ENST00000529002 SERF2P84101 59 aa11.62□□□□□ -0.55
SSRP1-204ENST00000529002 SSBP4Q9BWG4 385 aaPredicted RBP11.62□□□□□ -0.55
SSRP1-204ENST00000529002 FAM231BA6NCW3 169 aa11.61□□□□□ -0.55
SSRP1-204ENST00000529002 PRR26Q8N8Z3 221 aa11.61□□□□□ -0.55
SSRP1-204ENST00000529002 FAT4Q6V0I7 4981 aa11.6□□□□□ -0.55
SSRP1-204ENST00000529002 CTXND1A0A1B0GTU2 59 aa11.6□□□□□ -0.55
SSRP1-204ENST00000529002 SMIM17P0DL12 118 aa11.6□□□□□ -0.55
SSRP1-204ENST00000529002 SUMO4Q6EEV6 95 aa11.6□□□□□ -0.55
SSRP1-204ENST00000529002 GVQW2A0A096LPI5 108 aaPredicted RBP11.59□□□□□ -0.55
SSRP1-204ENST00000529002 OR5AL1P0C617 328 aa11.59□□□□□ -0.55
SSRP1-204ENST00000529002 LCE2AQ5TA79 106 aaPredicted RBP11.59□□□□□ -0.55
SSRP1-204ENST00000529002 CHCHD10Q8WYQ3 142 aaPredicted RBP11.59□□□□□ -0.55
SSRP1-204ENST00000529002 AKR1C3P42330 323 aa11.58□□□□□ -0.56
SSRP1-204ENST00000529002 IFITM3Q01628 133 aa11.58□□□□□ -0.56
SSRP1-204ENST00000529002 NKX6-2Q9C056 277 aaPredicted RBP11.58□□□□□ -0.56
SSRP1-204ENST00000529002 UBE2L6O14933 153 aa11.57□□□□□ -0.56
SSRP1-204ENST00000529002 AP1S3Q96PC3 154 aa11.57□□□□□ -0.56
SSRP1-204ENST00000529002 CXCL1P09341 107 aa11.56□□□□□ -0.56
SSRP1-204ENST00000529002 CST9LP1Q5W188 147 aa11.56□□□□□ -0.56
SSRP1-204ENST00000529002 MARVELD1Q9BSK0 173 aa11.56□□□□□ -0.56
SSRP1-204ENST00000529002 RPL7L1Q6DKI1 246 aaKnown RBP11.55□□□□□ -0.56
SSRP1-204ENST00000529002 LINC00474Q9P2X8 69 aa11.55□□□□□ -0.56
SSRP1-204ENST00000529002 PSORS1C2Q9UIG4 136 aa11.55□□□□□ -0.56
SSRP1-204ENST00000529002 A0A0U1RQV1 116 aa11.54□□□□□ -0.56
SSRP1-204ENST00000529002 A0A1W2PNN7 141 aa11.54□□□□□ -0.56
SSRP1-204ENST00000529002 AMTP48728 403 aa11.54□□□□□ -0.56
SSRP1-204ENST00000529002 CACNG7P62955 275 aa11.54□□□□□ -0.56
SSRP1-204ENST00000529002 PRR4Q16378 134 aa11.54□□□□□ -0.56
SSRP1-204ENST00000529002 ZNF664Q8N3J9 261 aa11.54□□□□□ -0.56
SSRP1-204ENST00000529002 TRAV26-2A0A0B4J265 109 aa11.53□□□□□ -0.56
SSRP1-204ENST00000529002 FOXI1Q12951 378 aa11.53□□□□□ -0.56
SSRP1-204ENST00000529002 CARD19Q96LW7 228 aa11.53□□□□□ -0.56
SSRP1-204ENST00000529002 MAP1LC3B2A6NCE7 125 aa11.52□□□□□ -0.57
SSRP1-204ENST00000529002 UPK1BO75841 260 aa11.52□□□□□ -0.57
SSRP1-204ENST00000529002 GAGE2BQ13066 116 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms