RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 RPP21Q9H633 154 aaKnown RBP9.58□□□□□ -0.88
CAPN1-216ENST00000528739 KLK12Q9UKR0 248 aa9.58□□□□□ -0.88
CAPN1-216ENST00000528739 TMEM250H0YL14 139 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 H7C1H1 209 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 K7EN84 100 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 GATCO43716 136 aaKnown RBP9.57□□□□□ -0.88
CAPN1-216ENST00000528739 CDK2AP2O75956 126 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 NTF3P20783 257 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 ELOBQ15370 118 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 CDPF1Q6NVV7 123 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 UBE2WQ96B02 151 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 CHCHD5Q9BSY4 110 aa9.57□□□□□ -0.88
CAPN1-216ENST00000528739 IGKV2D-24A0A075B6R9 120 aa9.56□□□□□ -0.88
CAPN1-216ENST00000528739 TRBV6-8A0A0A6YYG3 113 aa9.56□□□□□ -0.88
CAPN1-216ENST00000528739 MAPKAPK5-AS1Q8N8E1 139 aa9.56□□□□□ -0.88
CAPN1-216ENST00000528739 RMI2Q96E14 147 aa9.56□□□□□ -0.88
CAPN1-216ENST00000528739 KIF25-AS1Q9Y6Z4 181 aa9.56□□□□□ -0.88
CAPN1-216ENST00000528739 IGLV5-52A0A0A0MRZ9 124 aa9.55□□□□□ -0.88
CAPN1-216ENST00000528739 TMEM97Q5BJF2 176 aa9.55□□□□□ -0.88
CAPN1-216ENST00000528739 SUMO4Q6EEV6 95 aa9.55□□□□□ -0.88
CAPN1-216ENST00000528739 SMIM15Q7Z3B0 74 aa9.55□□□□□ -0.88
CAPN1-216ENST00000528739 LYPD6BQ8NI32 183 aa9.55□□□□□ -0.88
CAPN1-216ENST00000528739 SMIM7Q9BQ49 75 aa9.55□□□□□ -0.88
CAPN1-216ENST00000528739 DPH3P1Q9H4G8 78 aa9.55□□□□□ -0.88
CAPN1-216ENST00000528739 ZNF727A8MUV8 499 aa9.54□□□□□ -0.88
CAPN1-216ENST00000528739 LECT2O14960 151 aa9.54□□□□□ -0.88
CAPN1-216ENST00000528739 CRPP02741 224 aa9.54□□□□□ -0.88
CAPN1-216ENST00000528739 GCSHP23434 173 aa9.54□□□□□ -0.88
CAPN1-216ENST00000528739 C15orf54Q8N8G6 183 aa9.54□□□□□ -0.88
CAPN1-216ENST00000528739 DNAJC30Q96LL9 226 aa9.54□□□□□ -0.88
CAPN1-216ENST00000528739 FAM210AQ96ND0 272 aa9.54□□□□□ -0.88
CAPN1-216ENST00000528739 COX11Q9Y6N1 276 aa9.54□□□□□ -0.88
CAPN1-216ENST00000528739 TRBV25-1A0A075B6N4 114 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 LRCOL1A6NCL2 159 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 M0QY20 66 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 ANGP03950 147 aaKnown RBP9.53□□□□□ -0.88
CAPN1-216ENST00000528739 GAGE6Q13070 117 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 RASL11AQ6T310 242 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 Q8N814 137 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 BORCS7Q96B45 105 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 PGLYRP4Q96LB8 373 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
CAPN1-216ENST00000528739 A8MWL6 223 aa9.52□□□□□ -0.89
CAPN1-216ENST00000528739 CTRLP40313 264 aa9.52□□□□□ -0.89
CAPN1-216ENST00000528739 PKIAP61925 76 aa9.52□□□□□ -0.89
CAPN1-216ENST00000528739 WDR73Q6P4I2 378 aa9.52□□□□□ -0.89
CAPN1-216ENST00000528739 DEFB104AQ8WTQ1 72 aa9.52□□□□□ -0.89
CAPN1-216ENST00000528739 BAALCQ8WXS3 180 aa9.52□□□□□ -0.89
CAPN1-216ENST00000528739 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
CAPN1-216ENST00000528739 Q0VG73 95 aa9.51□□□□□ -0.89
CAPN1-216ENST00000528739 MPV17L2Q567V2 206 aa9.51□□□□□ -0.89
CAPN1-216ENST00000528739 NTN5Q8WTR8 489 aaPredicted RBP9.51□□□□□ -0.89
CAPN1-216ENST00000528739 LRP1BQ9NZR2 4599 aa9.51□□□□□ -0.89
CAPN1-216ENST00000528739 RYR1P21817 5038 aa9.5□□□□□ -0.89
CAPN1-216ENST00000528739 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.5□□□□□ -0.89
CAPN1-216ENST00000528739 SRP19P09132 144 aaKnown RBP9.5□□□□□ -0.89
CAPN1-216ENST00000528739 KRTAP10-1P60331 282 aa9.5□□□□□ -0.89
CAPN1-216ENST00000528739 ATRAIDQ6UW56 229 aa9.5□□□□□ -0.89
CAPN1-216ENST00000528739 NTM-AS1Q6ZSK4 140 aa9.5□□□□□ -0.89
CAPN1-216ENST00000528739 FAM231DQ6ZW35 169 aa9.5□□□□□ -0.89
CAPN1-216ENST00000528739 Q8N976 141 aa9.5□□□□□ -0.89
CAPN1-216ENST00000528739 C1orf43Q9BWL3 253 aa9.5□□□□□ -0.89
CAPN1-216ENST00000528739 NIT2Q9NQR4 276 aa9.5□□□□□ -0.89
CAPN1-216ENST00000528739 CLPSL2Q6UWE3 100 aa9.49□□□□□ -0.89
CAPN1-216ENST00000528739 GTSF1Q8WW33 167 aa9.49□□□□□ -0.89
CAPN1-216ENST00000528739 TRAV26-2A0A0B4J265 109 aa9.48□□□□□ -0.89
CAPN1-216ENST00000528739 UBE2L6O14933 153 aa9.48□□□□□ -0.89
CAPN1-216ENST00000528739 WFDC2Q14508 124 aa9.48□□□□□ -0.89
CAPN1-216ENST00000528739 PEA15Q15121 130 aa9.48□□□□□ -0.89
CAPN1-216ENST00000528739 TEX261Q6UWH6 196 aa9.48□□□□□ -0.89
CAPN1-216ENST00000528739 LINC01551Q86U37 167 aa9.48□□□□□ -0.89
CAPN1-216ENST00000528739 KRTAP17-1Q9BYP8 105 aa9.48□□□□□ -0.89
CAPN1-216ENST00000528739 FOXA3P55318 350 aaPredicted RBP9.47□□□□□ -0.89
CAPN1-216ENST00000528739 RBX1P62877 108 aa9.47□□□□□ -0.89
CAPN1-216ENST00000528739 COTL1Q14019 142 aa9.47□□□□□ -0.89
CAPN1-216ENST00000528739 TMEM241Q24JQ0 296 aa9.47□□□□□ -0.89
CAPN1-216ENST00000528739 GATD1Q8NB37 220 aa9.47□□□□□ -0.89
CAPN1-216ENST00000528739 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
CAPN1-216ENST00000528739 CNFNQ9BYD5 112 aa9.47□□□□□ -0.89
CAPN1-216ENST00000528739 NDUFS6O75380 124 aaKnown RBP9.46□□□□□ -0.9
CAPN1-216ENST00000528739 AMTP48728 403 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 ADIRFQ15847 76 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 IQCJQ1A5X6 159 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 CT83Q5H943 113 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 ENHOQ6UWT2 76 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 Q8N1X5 172 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 LINC00269Q8N2A0 174 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 TSKUQ8WUA8 353 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 KRTAP4-5Q9BYR2 181 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 OSTCQ9NRP0 149 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 DNAH5Q8TE73 4624 aa9.46□□□□□ -0.9
CAPN1-216ENST00000528739 HIGD1CA8MV81 97 aa9.45□□□□□ -0.9
CAPN1-216ENST00000528739 HLA-DQA1P01909 254 aa9.45□□□□□ -0.9
CAPN1-216ENST00000528739 HAMPP81172 84 aa9.45□□□□□ -0.9
CAPN1-216ENST00000528739 FAM74A3Q4VXF1 159 aa9.45□□□□□ -0.9
CAPN1-216ENST00000528739 A0A1B0GUT8 65 aa9.44□□□□□ -0.9
CAPN1-216ENST00000528739 RPL39LQ96EH5 51 aaKnown RBP9.44□□□□□ -0.9
CAPN1-216ENST00000528739 EPM2AB3EWF7 344 aa9.43□□□□□ -0.9
CAPN1-216ENST00000528739 PMCHP20382 165 aa9.43□□□□□ -0.9
CAPN1-216ENST00000528739 XGP55808 180 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms