RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 BUB3O43684 328 aa13.68□□□□□ -0.22
LTBP3-210ENST00000528516 RPL35AP18077 110 aaKnown RBP13.68□□□□□ -0.22
LTBP3-210ENST00000528516 TRGV1A0A0A0MS02 117 aa13.68□□□□□ -0.22
LTBP3-210ENST00000528516 CENPVL3A0A0U1RRI6 287 aa13.68□□□□□ -0.22
LTBP3-210ENST00000528516 NDUFA11Q86Y39 141 aa13.68□□□□□ -0.22
LTBP3-210ENST00000528516 PRO1854Q9UHT4 67 aa13.67□□□□□ -0.22
LTBP3-210ENST00000528516 C15orf53Q8NAA6 179 aa13.67□□□□□ -0.22
LTBP3-210ENST00000528516 NSUN5P1Q3KNT7 163 aa13.66□□□□□ -0.22
LTBP3-210ENST00000528516 STHQ8IWL8 128 aa13.66□□□□□ -0.22
LTBP3-210ENST00000528516 IGHV4-30-2A0A087WSY4 118 aa13.65□□□□□ -0.22
LTBP3-210ENST00000528516 MRGPRG-AS1Q2M3A8 158 aa13.65□□□□□ -0.22
LTBP3-210ENST00000528516 YAE1D1Q9NRH1 226 aa13.65□□□□□ -0.22
LTBP3-210ENST00000528516 COL12A1Q99715 3063 aa13.65□□□□□ -0.22
LTBP3-210ENST00000528516 Q6ZQT7 251 aa13.65□□□□□ -0.22
LTBP3-210ENST00000528516 HECTD1Q9ULT8 2610 aa13.64□□□□□ -0.23
LTBP3-210ENST00000528516 VCYO14598 125 aa13.64□□□□□ -0.23
LTBP3-210ENST00000528516 C10orf126Q8N4M7 172 aa13.64□□□□□ -0.23
LTBP3-210ENST00000528516 TMEM190Q8WZ59 177 aa13.64□□□□□ -0.23
LTBP3-210ENST00000528516 AJUBAQ96IF1 538 aa13.64□□□□□ -0.23
LTBP3-210ENST00000528516 CIRBPQ14011 172 aaKnown RBP13.64□□□□□ -0.23
LTBP3-210ENST00000528516 PAPPA-AS1Q5QFB9 102 aa13.63□□□□□ -0.23
LTBP3-210ENST00000528516 CRLF1O75462 422 aa13.63□□□□□ -0.23
LTBP3-210ENST00000528516 RPL39P62891 51 aaKnown RBP13.63□□□□□ -0.23
LTBP3-210ENST00000528516 RHODO00212 210 aa13.62□□□□□ -0.23
LTBP3-210ENST00000528516 BAALCQ8WXS3 180 aa13.62□□□□□ -0.23
LTBP3-210ENST00000528516 TRAV12-1A0A0B4J245 112 aa13.62□□□□□ -0.23
LTBP3-210ENST00000528516 MRPS12O15235 138 aaKnown RBP13.62□□□□□ -0.23
LTBP3-210ENST00000528516 RAI1Q7Z5J4 1906 aaPredicted RBP13.62□□□□□ -0.23
LTBP3-210ENST00000528516 NRACQ8N912 160 aa13.61□□□□□ -0.23
LTBP3-210ENST00000528516 PF4P02776 101 aa13.61□□□□□ -0.23
LTBP3-210ENST00000528516 UBE2D1P51668 147 aa13.61□□□□□ -0.23
LTBP3-210ENST00000528516 DEFB112Q30KQ8 113 aa13.61□□□□□ -0.23
LTBP3-210ENST00000528516 IGLV2-18A0A075B6J9 118 aa13.61□□□□□ -0.23
LTBP3-210ENST00000528516 CRIP2P52943 208 aaPredicted RBP13.61□□□□□ -0.23
LTBP3-210ENST00000528516 UBE2D3P61077 147 aa13.61□□□□□ -0.23
LTBP3-210ENST00000528516 UBE2D2P62837 147 aa13.61□□□□□ -0.23
LTBP3-210ENST00000528516 CFC1BP0CG36 223 aa13.6□□□□□ -0.23
LTBP3-210ENST00000528516 CFC1P0CG37 223 aa13.6□□□□□ -0.23
LTBP3-210ENST00000528516 DUSP14O95147 198 aaKnown RBP13.6□□□□□ -0.23
LTBP3-210ENST00000528516 USMG5Q96IX5 58 aa13.6□□□□□ -0.23
LTBP3-210ENST00000528516 C11orf86A6NJI1 115 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 Q8N1Y9 231 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 C8orf31Q8N9H6 132 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 ATRQ13535 2644 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 TEX49A0A1B0GTD5 131 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 A4D1N5 150 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 C19orf84I3L1E1 186 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 Q6ZS46 218 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 RASL10AQ92737 203 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 FAM223BA6NKX1 122 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 FAM223AQ8IWN6 122 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 NEXN-AS1Q8NBZ9 246 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 CHCHD5Q9BSY4 110 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 C11orf21Q9P2W6 132 aa13.59□□□□□ -0.23
LTBP3-210ENST00000528516 C2orf82Q6UX34 121 aa13.58□□□□□ -0.23
LTBP3-210ENST00000528516 OPRPNQ99935 248 aaPredicted RBP13.58□□□□□ -0.23
LTBP3-210ENST00000528516 CRYGBP07316 175 aa13.58□□□□□ -0.24
LTBP3-210ENST00000528516 DEFB130BP0DP73 79 aa13.58□□□□□ -0.24
LTBP3-210ENST00000528516 DEFB130AP0DP74 79 aa13.58□□□□□ -0.24
LTBP3-210ENST00000528516 ATXN8Q156A1 80 aa13.58□□□□□ -0.24
LTBP3-210ENST00000528516 TRGV4A0A0C4DH28 118 aa13.58□□□□□ -0.24
LTBP3-210ENST00000528516 NHLRC4P0CG21 123 aaPredicted RBP13.58□□□□□ -0.24
LTBP3-210ENST00000528516 A0A0J9YY99 117 aa13.57□□□□□ -0.24
LTBP3-210ENST00000528516 APRG1Q8IVJ8 170 aa13.57□□□□□ -0.24
LTBP3-210ENST00000528516 TOMM6Q96B49 74 aa13.57□□□□□ -0.24
LTBP3-210ENST00000528516 FAM110AQ9BQ89 295 aa13.57□□□□□ -0.24
LTBP3-210ENST00000528516 H3BMM0 161 aa13.57□□□□□ -0.24
LTBP3-210ENST00000528516 UBE2WQ96B02 151 aa13.57□□□□□ -0.24
LTBP3-210ENST00000528516 LINC01619G3V211 115 aa13.57□□□□□ -0.24
LTBP3-210ENST00000528516 C10orf99Q6UWK7 81 aa13.57□□□□□ -0.24
LTBP3-210ENST00000528516 NPBQ8NG41 125 aa13.56□□□□□ -0.24
LTBP3-210ENST00000528516 CNFNQ9BYD5 112 aa13.56□□□□□ -0.24
LTBP3-210ENST00000528516 SMAD5-AS1Q9Y6J3 95 aa13.55□□□□□ -0.24
LTBP3-210ENST00000528516 CITED1Q99966 193 aa13.55□□□□□ -0.24
LTBP3-210ENST00000528516 NDUFA4O00483 81 aa13.55□□□□□ -0.24
LTBP3-210ENST00000528516 IGHV7-4-1A0A0J9YVY3 117 aa13.54□□□□□ -0.24
LTBP3-210ENST00000528516 CCDC140Q96MF4 163 aa13.54□□□□□ -0.24
LTBP3-210ENST00000528516 J3QQQ9 107 aa13.54□□□□□ -0.24
LTBP3-210ENST00000528516 LINC01620Q4KN68 170 aa13.54□□□□□ -0.24
LTBP3-210ENST00000528516 TRAV8-3A0A0A6YYJ7 113 aa13.53□□□□□ -0.24
LTBP3-210ENST00000528516 LINC01546A6NGU7 62 aa13.53□□□□□ -0.24
LTBP3-210ENST00000528516 PEMTQ9UBM1 199 aa13.53□□□□□ -0.24
LTBP3-210ENST00000528516 TRGV11A0A075B6L2 103 aa13.53□□□□□ -0.24
LTBP3-210ENST00000528516 A0A096LPF7 62 aa13.53□□□□□ -0.24
LTBP3-210ENST00000528516 DNAL4O96015 105 aa13.53□□□□□ -0.24
LTBP3-210ENST00000528516 SLURP1P55000 103 aa13.53□□□□□ -0.24
LTBP3-210ENST00000528516 C5orf56Q8N8D9 126 aa13.53□□□□□ -0.24
LTBP3-210ENST00000528516 IGHV1OR15-1A0A075B7D0 117 aa13.52□□□□□ -0.24
LTBP3-210ENST00000528516 PRM2P04554 102 aa13.52□□□□□ -0.24
LTBP3-210ENST00000528516 PMVKQ15126 192 aa13.52□□□□□ -0.25
LTBP3-210ENST00000528516 TIMM21Q9BVV7 248 aa13.52□□□□□ -0.25
LTBP3-210ENST00000528516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.51□□□□□ -0.25
LTBP3-210ENST00000528516 IGKV2-29A2NJV5 120 aaPredicted RBP13.51□□□□□ -0.25
LTBP3-210ENST00000528516 ZNRF2Q8NHG8 242 aa13.51□□□□□ -0.25
LTBP3-210ENST00000528516 IGHV3-30P01768 117 aa13.51□□□□□ -0.25
LTBP3-210ENST00000528516 IGHV3-30-5P0DP03 117 aa13.51□□□□□ -0.25
LTBP3-210ENST00000528516 TMEM101Q96IK0 257 aa13.51□□□□□ -0.25
LTBP3-210ENST00000528516 MDFICQ9P1T7 246 aa13.51□□□□□ -0.25
LTBP3-210ENST00000528516 MUC4Q99102 2169 aa13.51□□□□□ -0.25
LTBP3-210ENST00000528516 A0A0J9YXV3 536 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 215.7 ms