RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 HHLA3Q9XRX5 114 aa10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 FASNP49327 2511 aaKnown RBP10.76□□□□□ -0.69
ECHDC1-220ENST00000528402 ANKRD39Q53RE8 183 aa10.75□□□□□ -0.69
ECHDC1-220ENST00000528402 RS1O15537 224 aa10.75□□□□□ -0.69
ECHDC1-220ENST00000528402 CIDEAO60543 219 aa10.75□□□□□ -0.69
ECHDC1-220ENST00000528402 C1orf158Q8N1D5 194 aa10.75□□□□□ -0.69
ECHDC1-220ENST00000528402 STPG4Q8N801 248 aa10.75□□□□□ -0.69
ECHDC1-220ENST00000528402 LINC00482Q8N8I6 264 aa10.75□□□□□ -0.69
ECHDC1-220ENST00000528402 CHTOPQ9Y3Y2 248 aaKnown RBP10.75□□□□□ -0.69
ECHDC1-220ENST00000528402 WNK1Q9H4A3 2382 aa10.74□□□□□ -0.69
ECHDC1-220ENST00000528402 ANK3Q12955 4377 aaKnown RBP10.74□□□□□ -0.69
ECHDC1-220ENST00000528402 A0A1B0GV90 55 aa10.74□□□□□ -0.69
ECHDC1-220ENST00000528402 CFAP126Q5VTH2 177 aa10.74□□□□□ -0.69
ECHDC1-220ENST00000528402 TMEM263Q8WUH6 116 aaKnown RBP10.74□□□□□ -0.69
ECHDC1-220ENST00000528402 C19orf73Q9NVV2 129 aa10.74□□□□□ -0.69
ECHDC1-220ENST00000528402 MRPL35Q9NZE8 188 aaKnown RBP10.74□□□□□ -0.69
ECHDC1-220ENST00000528402 TNFRSF18Q9Y5U5 241 aa10.74□□□□□ -0.69
ECHDC1-220ENST00000528402 IGIPA6NJ69 53 aa10.73□□□□□ -0.69
ECHDC1-220ENST00000528402 KRTAP10-3P60369 221 aa10.73□□□□□ -0.69
ECHDC1-220ENST00000528402 BATFQ16520 125 aa10.73□□□□□ -0.69
ECHDC1-220ENST00000528402 LCE2DQ5TA82 110 aaPredicted RBP10.73□□□□□ -0.69
ECHDC1-220ENST00000528402 IL17DQ8TAD2 202 aa10.73□□□□□ -0.69
ECHDC1-220ENST00000528402 BAALCQ8WXS3 180 aa10.73□□□□□ -0.69
ECHDC1-220ENST00000528402 TP53TG1Q9Y2A0 90 aa10.73□□□□□ -0.69
ECHDC1-220ENST00000528402 IGHV3-53P01767 116 aa10.72□□□□□ -0.69
ECHDC1-220ENST00000528402 NPSP0C0P6 89 aa10.72□□□□□ -0.69
ECHDC1-220ENST00000528402 FGF6P10767 208 aa10.72□□□□□ -0.69
ECHDC1-220ENST00000528402 GCN1Q92616 2671 aaKnown RBP10.72□□□□□ -0.69
ECHDC1-220ENST00000528402 AKAP9Q99996 3911 aa10.71□□□□□ -0.69
ECHDC1-220ENST00000528402 PMVKQ15126 192 aa10.71□□□□□ -0.69
ECHDC1-220ENST00000528402 C9orf66Q5T8R8 295 aa10.71□□□□□ -0.69
ECHDC1-220ENST00000528402 ZC2HC1BQ5TFG8 222 aa10.71□□□□□ -0.69
ECHDC1-220ENST00000528402 RNASE8Q8TDE3 154 aaKnown RBP10.71□□□□□ -0.69
ECHDC1-220ENST00000528402 C16orf74Q96GX8 76 aa10.71□□□□□ -0.69
ECHDC1-220ENST00000528402 MTORP42345 2549 aa10.7□□□□□ -0.7
ECHDC1-220ENST00000528402 PRSS29PA6NIE9 313 aa10.7□□□□□ -0.7
ECHDC1-220ENST00000528402 HINT1P49773 126 aaPredicted RBP10.7□□□□□ -0.7
ECHDC1-220ENST00000528402 CRYBA4P53673 196 aa10.7□□□□□ -0.7
ECHDC1-220ENST00000528402 DAZ2Q13117 558 aaKnown RBP10.7□□□□□ -0.7
ECHDC1-220ENST00000528402 TMEM97Q5BJF2 176 aa10.7□□□□□ -0.7
ECHDC1-220ENST00000528402 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
ECHDC1-220ENST00000528402 TSHBP01222 138 aa10.69□□□□□ -0.7
ECHDC1-220ENST00000528402 AZU1P20160 251 aa10.69□□□□□ -0.7
ECHDC1-220ENST00000528402 NMUP48645 174 aa10.69□□□□□ -0.7
ECHDC1-220ENST00000528402 C20orf203Q8NBC4 194 aa10.69□□□□□ -0.7
ECHDC1-220ENST00000528402 HIGD1BQ9P298 99 aa10.69□□□□□ -0.7
ECHDC1-220ENST00000528402 PYGO1Q9Y3Y4 419 aa10.69□□□□□ -0.7
ECHDC1-220ENST00000528402 MPV17L2Q567V2 206 aa10.68□□□□□ -0.7
ECHDC1-220ENST00000528402 C2orf91Q6ZV80 131 aa10.68□□□□□ -0.7
ECHDC1-220ENST00000528402 OR4C5Q8NGB2 326 aa10.68□□□□□ -0.7
ECHDC1-220ENST00000528402 MRPL16Q9NX20 251 aaKnown RBP10.68□□□□□ -0.7
ECHDC1-220ENST00000528402 IGHV3OR16-12A0A075B7B8 117 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 TRAV4A0A0B4J268 109 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 TRBV10-1A0A0K0K1A3 114 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 GIG44P09565 113 aaPredicted RBP10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 SEC11AP67812 179 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 HSD52Q0P140 79 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 BVES-AS1Q5T3Y7 98 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 GTSCR1Q86UQ5 136 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 CST9LQ9H4G1 147 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 IGHV3-73A0A0B4J1V6 119 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 PRM2P04554 102 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 P0DMU3 169 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 FAM231AP0DMU4 169 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 FAM231CP0DMU5 169 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 CSNK1G2-AS1Q8NCQ2 148 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 CITED1Q99966 193 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 OVOL2Q9BRP0 275 aa10.67□□□□□ -0.7
ECHDC1-220ENST00000528402 NACAE9PAV3 2078 aa10.66□□□□□ -0.7
ECHDC1-220ENST00000528402 TRGV1A0A0A0MS02 117 aa10.66□□□□□ -0.7
ECHDC1-220ENST00000528402 HERVK_113P61574 105 aa10.66□□□□□ -0.7
ECHDC1-220ENST00000528402 RRN3P1Q2M238 152 aa10.66□□□□□ -0.7
ECHDC1-220ENST00000528402 HECTD1Q9ULT8 2610 aa10.65□□□□□ -0.7
ECHDC1-220ENST00000528402 RPL35AP18077 110 aaKnown RBP10.65□□□□□ -0.7
ECHDC1-220ENST00000528402 RPL39P62891 51 aaKnown RBP10.65□□□□□ -0.7
ECHDC1-220ENST00000528402 PCP2Q8IVA1 136 aa10.65□□□□□ -0.7
ECHDC1-220ENST00000528402 E9PLD3 99 aa10.64□□□□□ -0.71
ECHDC1-220ENST00000528402 OR11H2Q8NH07 326 aa10.64□□□□□ -0.71
ECHDC1-220ENST00000528402 ZMAT5Q9UDW3 170 aaKnown RBP10.64□□□□□ -0.71
ECHDC1-220ENST00000528402 NF1P21359 2839 aa10.64□□□□□ -0.71
ECHDC1-220ENST00000528402 IGKV2D-26A0A0A0MRZ7 120 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 A6NDN8 102 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 SMIM9A6NGZ8 99 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 SMAGPQ0VAQ4 97 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 GAGE1Q13065 139 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 COTL1Q14019 142 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 TAL2Q16559 108 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 ORAOV1Q8WV07 137 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 VCX2Q9H322 139 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 SPANXA1Q9NS26 97 aa10.63□□□□□ -0.71
ECHDC1-220ENST00000528402 TRBV7-3A0A075B6L6 115 aa10.62□□□□□ -0.71
ECHDC1-220ENST00000528402 C11orf86A6NJI1 115 aa10.62□□□□□ -0.71
ECHDC1-220ENST00000528402 RPL36AP83881 106 aaKnown RBP10.62□□□□□ -0.71
ECHDC1-220ENST00000528402 Q6ZSN1 163 aa10.62□□□□□ -0.71
ECHDC1-220ENST00000528402 NFE4Q86UQ8 179 aa10.62□□□□□ -0.71
ECHDC1-220ENST00000528402 RPL36ALQ969Q0 106 aaKnown RBP10.62□□□□□ -0.71
ECHDC1-220ENST00000528402 IGLV4-69A0A075B6H9 119 aa10.61□□□□□ -0.71
ECHDC1-220ENST00000528402 DAZ4Q86SG3 579 aaKnown RBP10.61□□□□□ -0.71
ECHDC1-220ENST00000528402 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.61□□□□□ -0.71
ECHDC1-220ENST00000528402 WFDC9Q8NEX5 89 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms