RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 DYSFO75923 2080 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 ODF3BA8MYP8 253 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 CFAP126Q5VTH2 177 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 C3orf56Q8N813 242 aa5.56□□□□□ -1.52
CTNND1-218ENST00000528232 TRBV30A0A0K0K1B3 111 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 C9orf47Q6ZRZ4 202 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 DAND5Q8N907 189 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 SPTSSBQ8NFR3 76 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 AJUBAQ96IF1 538 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 TIMM17BO60830 172 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 NDUFB1O75438 58 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 APOC4P55056 127 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 TOMM6Q96B49 74 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 MRPL36Q9P0J6 103 aaKnown RBP5.55□□□□□ -1.52
CTNND1-218ENST00000528232 IGKV1D-37A0A075B6S9 117 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 K7EMT4 169 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 MED14OSP0DP75 135 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 UBE2AP49459 152 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 FAM19A5Q7Z5A7 132 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-218ENST00000528232 OPRPNQ99935 248 aaPredicted RBP5.55□□□□□ -1.52
CTNND1-218ENST00000528232 UPK3BQ9BT76 320 aa5.55□□□□□ -1.52
CTNND1-218ENST00000528232 COX7A2LO14548 114 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 TNRC6AQ8NDV7 1962 aaKnown RBP5.54□□□□□ -1.52
CTNND1-218ENST00000528232 A0A0J9YXY3 114 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 XGP55808 180 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 TP73-AS1Q9UF72 201 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 SHANK1Q9Y566 2161 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 NREPQ16612 68 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 LINC00173Q6ZV60 143 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 ZNF503Q96F45 646 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 SPTAN1Q13813 2472 aaKnown RBP5.54□□□□□ -1.52
CTNND1-218ENST00000528232 HRCT1Q6UXD1 115 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 Q9H8V8 135 aa5.54□□□□□ -1.52
CTNND1-218ENST00000528232 NBASA2RRP1 2371 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 C19orf71A6NCJ1 209 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 TRAV4A0A0B4J268 109 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 A0A1B0GXF2 115 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 PKDREJQ9NTG1 2253 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 ZGRF1Q86YA3 2104 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 CCL24O00175 119 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 ANGP03950 147 aaKnown RBP5.53□□□□□ -1.52
CTNND1-218ENST00000528232 BLCAPP62952 87 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 PRR15LQ9BU68 103 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 RETNQ9HD89 108 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 Q6JHZ5 121 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 C1orf229Q6ZS94 237 aaPredicted RBP5.53□□□□□ -1.52
CTNND1-218ENST00000528232 GPHB5Q86YW7 130 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 TMEM61Q8N0U2 210 aa5.53□□□□□ -1.52
CTNND1-218ENST00000528232 SLURP1P55000 103 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 A6NDX4 124 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 PRAC2D3DTV9 90 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 GATA1P15976 413 aaPredicted RBP5.52□□□□□ -1.53
CTNND1-218ENST00000528232 RNASE13Q5GAN3 156 aaKnown RBP5.52□□□□□ -1.53
CTNND1-218ENST00000528232 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 CACNA1BQ00975 2339 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 USP17L23D6RBM5 183 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 WFDC11Q8NEX6 87 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 ATG2AQ2TAZ0 1938 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 ROS1P08922 2347 aa5.52□□□□□ -1.53
CTNND1-218ENST00000528232 FREM1Q5H8C1 2179 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 ETDCA0A1B0GVM5 59 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 MIAQ16674 131 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 DEFB136Q30KP8 78 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 RPL39LQ96EH5 51 aaKnown RBP5.51□□□□□ -1.53
CTNND1-218ENST00000528232 C14orf132Q9NPU4 83 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 MSRB1Q9NZV6 116 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 MALRD1Q5VYJ5 2156 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 IGHV4OR15-8A0A075B7B6 117 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 A0A087WW49 117 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 IGLV2-8P01709 118 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 SHISA2Q6UWI4 295 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 COX7B2Q8TF08 81 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 EP400Q96L91 3159 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 COL6A6A6NMZ7 2263 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 XCL1P47992 114 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 C4orf3Q8WVX3 66 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 C16orf74Q96GX8 76 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 SND1-IT1Q9HBX3 110 aa5.51□□□□□ -1.53
CTNND1-218ENST00000528232 IGHV4-28A0A0C4DH34 117 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 MED13Q9UHV7 2174 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 LMO4P61968 165 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 C22orf34Q6ZV56 151 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 NOP10Q9NPE3 64 aaKnown RBP5.5□□□□□ -1.53
CTNND1-218ENST00000528232 TEX49A0A1B0GTD5 131 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 LY6LH3BQJ8 138 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 CLPSL2Q6UWE3 100 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 USF3Q68DE3 2245 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.5□□□□□ -1.53
CTNND1-218ENST00000528232 TRAV23DV6A0A075B6W5 121 aa5.5□□□□□ -1.53
CTNND1-218ENST00000528232 IGKV2-29A2NJV5 120 aaPredicted RBP5.5□□□□□ -1.53
CTNND1-218ENST00000528232 CCDC140Q96MF4 163 aa5.49□□□□□ -1.53
CTNND1-218ENST00000528232 MED12LQ86YW9 2145 aa5.49□□□□□ -1.53
CTNND1-218ENST00000528232 TNFRSF13BO14836 293 aaPredicted RBP5.49□□□□□ -1.53
CTNND1-218ENST00000528232 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
CTNND1-218ENST00000528232 HIST2H2BCQ6DN03 193 aa5.49□□□□□ -1.53
CTNND1-218ENST00000528232 HIST2H2BDQ6DRA6 164 aa5.49□□□□□ -1.53
CTNND1-218ENST00000528232 TRAV7A0A075B6U4 112 aa5.49□□□□□ -1.53
CTNND1-218ENST00000528232 K7EQD1 137 aa5.49□□□□□ -1.53
CTNND1-218ENST00000528232 APRG1Q8IVJ8 170 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms