RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 EXOC3-AS1Q8N2X6 119 aa3.8□□□□□ -1.8
CTNND1-217ENST00000527599 TMEM75Q8N9X5 138 aa3.8□□□□□ -1.8
CTNND1-217ENST00000527599 CMTM2Q8TAZ6 248 aa3.8□□□□□ -1.8
CTNND1-217ENST00000527599 TMEM126AQ9H061 195 aa3.8□□□□□ -1.8
CTNND1-217ENST00000527599 RABAC1Q9UI14 185 aa3.8□□□□□ -1.8
CTNND1-217ENST00000527599 ERG28Q9UKR5 140 aa3.8□□□□□ -1.8
CTNND1-217ENST00000527599 CSDC2Q9Y534 153 aaKnown RBP3.8□□□□□ -1.8
CTNND1-217ENST00000527599 TRAPPC1Q9Y5R8 145 aa3.8□□□□□ -1.8
CTNND1-217ENST00000527599 UBR5O95071 2799 aaPredicted RBP3.8□□□□□ -1.8
CTNND1-217ENST00000527599 DOPEY2Q9Y3R5 2298 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 LRRK2Q5S007 2527 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 TRAV8-1A0A0A6YYK1 113 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 CLPSL1A2RUU4 121 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 C19orf71A6NCJ1 209 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 IZUMO1RA6ND01 250 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 SMIM9A6NGZ8 99 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 H3BUA1 57 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 TRGV3P03979 118 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 CBLN1P23435 193 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 TCL1AP56279 114 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 SEC61GP60059 68 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 PSG9Q00887 426 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 DEFB112Q30KQ8 113 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 TMEM78Q5T7P6 136 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 IGFL1Q6UW32 110 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 CLEC19AQ6UXS0 136 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 LINC00322Q6ZN03 302 aaPredicted RBP3.79□□□□□ -1.8
CTNND1-217ENST00000527599 GOLT1AQ6ZVE7 132 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 OR4B1Q8NGF8 309 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 ZNF418Q8TF45 676 aaPredicted RBP3.79□□□□□ -1.8
CTNND1-217ENST00000527599 LINC00527Q9UJ94 153 aa3.79□□□□□ -1.8
CTNND1-217ENST00000527599 TACC2O95359 2948 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 ZFHX3Q15911 3703 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 PTPN13Q12923 2485 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 IGHV3OR16-8A0A075B7F1 116 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 M0R3E3 92 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 CA1P00915 261 aaPredicted RBP3.78□□□□□ -1.8
CTNND1-217ENST00000527599 MT-ND6P03923 174 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 CRISP2P16562 243 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 TPPP2P59282 170 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 BLCAPP62952 87 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 C6orf226Q5I0X4 101 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 ZNF705AQ6ZN79 300 aaPredicted RBP3.78□□□□□ -1.8
CTNND1-217ENST00000527599 FOXI2Q6ZQN5 318 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 TMEM136Q6ZRR5 245 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 PRNTQ86SH4 94 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 SMIM20Q8N5G0 67 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 FER1L6-AS1Q8NA97 138 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 NUP35Q8NFH5 326 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 TSKUQ8WUA8 353 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 DNAJC30Q96LL9 226 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 GNB1LQ9BYB4 327 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 RPP21Q9H633 154 aaKnown RBP3.78□□□□□ -1.8
CTNND1-217ENST00000527599 SPANXB1Q9NS25 103 aaPredicted RBP3.78□□□□□ -1.8
CTNND1-217ENST00000527599 UQCR10Q9UDW1 63 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 NAT8BQ9UHF3 227 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 HSPB8Q9UJY1 196 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 LAMTOR2Q9Y2Q5 125 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 VPS13CQ709C8 3753 aa3.78□□□□□ -1.8
CTNND1-217ENST00000527599 FASNP49327 2511 aaKnown RBP3.78□□□□□ -1.8
CTNND1-217ENST00000527599 SPINK4O60575 86 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 P01737 135 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 HLA-DQA1P01909 254 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 HLA-DMBP28068 263 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 CSN1S1P47710 185 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 SLC35B1P78383 322 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 LINC00483Q53H64 154 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 ZFAND6Q6FIF0 208 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 MRPL54Q6P161 138 aaKnown RBP3.77□□□□□ -1.81
CTNND1-217ENST00000527599 RASL11AQ6T310 242 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 GTF2H5Q6ZYL4 71 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 ATP5L2Q7Z4Y8 100 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 ZC2HC1AQ96GY0 325 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 USMG5Q96IX5 58 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 METTL26Q96S19 204 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 SLC50A1Q9BRV3 221 aa3.77□□□□□ -1.81
CTNND1-217ENST00000527599 GCN1Q92616 2671 aaKnown RBP3.77□□□□□ -1.81
CTNND1-217ENST00000527599 BAHCC1Q9P281 2608 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 USP9YO00507 2555 aaPredicted RBP3.76□□□□□ -1.81
CTNND1-217ENST00000527599 POLQO75417 2590 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 NBPF19A0A087WUL8 3843 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 IGKV2-40A0A087WW87 121 aaPredicted RBP3.76□□□□□ -1.81
CTNND1-217ENST00000527599 A0A087WX48 190 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 A0A1B0GUS0 222 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 A0A1B0GXF2 115 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 HIGD1CA8MV81 97 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 A8MWL6 223 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 NDUFA4O00483 81 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 ZNF207O43670 478 aaKnown RBP3.76□□□□□ -1.81
CTNND1-217ENST00000527599 IGKV2D-40P01614 121 aaPredicted RBP3.76□□□□□ -1.81
CTNND1-217ENST00000527599 TRBV12-3P01733 135 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 PRB4P10163 310 aaPredicted RBP3.76□□□□□ -1.81
CTNND1-217ENST00000527599 HSD52Q0P140 79 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 TMEM97Q5BJF2 176 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 GDF5OSQ5U4N7 250 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 OR5A1Q8NGJ0 315 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 OR1N2Q8NGR9 330 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 SS18L2Q9UHA2 77 aa3.76□□□□□ -1.81
CTNND1-217ENST00000527599 CSMD1Q96PZ7 3565 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms