RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 A0A087WWL8 130 aa10.42□□□□□ -0.74
PTPRU-210ENST00000527027 TRBV10-1A0A0K0K1A3 114 aa10.42□□□□□ -0.74
PTPRU-210ENST00000527027 KRBOX1C9JBD0 128 aa10.42□□□□□ -0.74
PTPRU-210ENST00000527027 CRIP1P50238 77 aa10.42□□□□□ -0.74
PTPRU-210ENST00000527027 RPL36AP83881 106 aaKnown RBP10.42□□□□□ -0.74
PTPRU-210ENST00000527027 ENHOQ6UWT2 76 aa10.42□□□□□ -0.74
PTPRU-210ENST00000527027 RPL36ALQ969Q0 106 aaKnown RBP10.42□□□□□ -0.74
PTPRU-210ENST00000527027 DAZAP1Q96EP5 407 aaKnown RBP10.42□□□□□ -0.74
PTPRU-210ENST00000527027 MED9Q9NWA0 146 aa10.42□□□□□ -0.74
PTPRU-210ENST00000527027 RAB19A4D1S5 217 aa10.41□□□□□ -0.74
PTPRU-210ENST00000527027 GRIFINA4D1Z8 144 aa10.41□□□□□ -0.74
PTPRU-210ENST00000527027 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
PTPRU-210ENST00000527027 M0R036 132 aa10.41□□□□□ -0.74
PTPRU-210ENST00000527027 PEX7O00628 323 aa10.41□□□□□ -0.74
PTPRU-210ENST00000527027 HNRNPA3P51991 378 aaKnown RBP10.41□□□□□ -0.74
PTPRU-210ENST00000527027 UBE2D3P61077 147 aa10.41□□□□□ -0.74
PTPRU-210ENST00000527027 UBE2D2P62837 147 aa10.41□□□□□ -0.74
PTPRU-210ENST00000527027 PHLDA3Q9Y5J5 127 aa10.41□□□□□ -0.74
PTPRU-210ENST00000527027 TRBV7-3A0A075B6L6 115 aa10.4□□□□□ -0.74
PTPRU-210ENST00000527027 TMEM250H0YL14 139 aa10.4□□□□□ -0.74
PTPRU-210ENST00000527027 AKR1C3P42330 323 aa10.4□□□□□ -0.74
PTPRU-210ENST00000527027 UBE2G1P62253 170 aa10.4□□□□□ -0.74
PTPRU-210ENST00000527027 FMC1Q96HJ9 113 aa10.4□□□□□ -0.74
PTPRU-210ENST00000527027 TRBV6-8A0A0A6YYG3 113 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 USP17L23D6RBM5 183 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 M0R381 172 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 CRPP02741 224 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 DGAT2L7PQ6IED9 249 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 COX8CQ7Z4L0 72 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 Q86TA4 180 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 C11orf52Q96A22 123 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 ZC2HC1AQ96GY0 325 aa10.39□□□□□ -0.75
PTPRU-210ENST00000527027 TRBV6-1A0A0K0K1D8 114 aa10.38□□□□□ -0.75
PTPRU-210ENST00000527027 SH2D1AO60880 128 aa10.38□□□□□ -0.75
PTPRU-210ENST00000527027 UQCC3Q6UW78 93 aa10.38□□□□□ -0.75
PTPRU-210ENST00000527027 C15orf54Q8N8G6 183 aa10.38□□□□□ -0.75
PTPRU-210ENST00000527027 OR10G8Q8NGN5 311 aa10.38□□□□□ -0.75
PTPRU-210ENST00000527027 ANGP03950 147 aaKnown RBP10.37□□□□□ -0.75
PTPRU-210ENST00000527027 PRSS1P07477 247 aa10.37□□□□□ -0.75
PTPRU-210ENST00000527027 MPV17L2Q567V2 206 aa10.37□□□□□ -0.75
PTPRU-210ENST00000527027 FAM162BQ5T6X4 162 aa10.37□□□□□ -0.75
PTPRU-210ENST00000527027 ZFP82Q8N141 532 aa10.37□□□□□ -0.75
PTPRU-210ENST00000527027 C9orf163Q8N9P6 203 aa10.37□□□□□ -0.75
PTPRU-210ENST00000527027 ZFP30Q9Y2G7 519 aa10.37□□□□□ -0.75
PTPRU-210ENST00000527027 LINC00862A6NCI5 91 aa10.36□□□□□ -0.75
PTPRU-210ENST00000527027 SMIM12Q96EX1 92 aa10.36□□□□□ -0.75
PTPRU-210ENST00000527027 TMSB15BA0A087X1C1 80 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 SCO2A0A1W2PP80 73 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 HLA-DQA1P01909 254 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 MT1HL1P0DM35 61 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 RAB4BP61018 213 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 MIAQ16674 131 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 ZNF674Q2M3X9 581 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 LINC01559Q495D7 138 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 FAM74A3Q4VXF1 159 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 BIN3Q9NQY0 253 aa10.35□□□□□ -0.75
PTPRU-210ENST00000527027 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.35□□□□□ -0.75
PTPRU-210ENST00000527027 PKIAP61925 76 aa10.34□□□□□ -0.75
PTPRU-210ENST00000527027 NDUFA5Q16718 116 aa10.34□□□□□ -0.75
PTPRU-210ENST00000527027 CHCHD5Q9BSY4 110 aa10.34□□□□□ -0.75
PTPRU-210ENST00000527027 SRP19P09132 144 aaKnown RBP10.33□□□□□ -0.76
PTPRU-210ENST00000527027 RPL19P84098 196 aaKnown RBP10.33□□□□□ -0.76
PTPRU-210ENST00000527027 SDIM1Q6ZPB5 146 aa10.33□□□□□ -0.76
PTPRU-210ENST00000527027 Q6ZRU5 148 aa10.33□□□□□ -0.76
PTPRU-210ENST00000527027 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.33□□□□□ -0.76
PTPRU-210ENST00000527027 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
PTPRU-210ENST00000527027 PANO1I0J062 215 aa10.32□□□□□ -0.76
PTPRU-210ENST00000527027 RPL35P42766 123 aaKnown RBP10.32□□□□□ -0.76
PTPRU-210ENST00000527027 GNG4P50150 75 aa10.32□□□□□ -0.76
PTPRU-210ENST00000527027 PRR27Q6MZM9 219 aa10.32□□□□□ -0.76
PTPRU-210ENST00000527027 COMMD7Q86VX2 200 aa10.32□□□□□ -0.76
PTPRU-210ENST00000527027 BAGE2Q86Y30 109 aa10.32□□□□□ -0.76
PTPRU-210ENST00000527027 PRR34Q9NV39 138 aa10.32□□□□□ -0.76
PTPRU-210ENST00000527027 LTAP01374 205 aa10.31□□□□□ -0.76
PTPRU-210ENST00000527027 ZNF56Q15929 161 aa10.31□□□□□ -0.76
PTPRU-210ENST00000527027 KRTAP26-1Q6PEX3 210 aa10.31□□□□□ -0.76
PTPRU-210ENST00000527027 ZNF727A8MUV8 499 aa10.3□□□□□ -0.76
PTPRU-210ENST00000527027 CEBPGP53567 150 aa10.3□□□□□ -0.76
PTPRU-210ENST00000527027 TMEM97Q5BJF2 176 aa10.3□□□□□ -0.76
PTPRU-210ENST00000527027 NTM-AS1Q6ZSK4 140 aa10.3□□□□□ -0.76
PTPRU-210ENST00000527027 LINC00269Q8N2A0 174 aa10.3□□□□□ -0.76
PTPRU-210ENST00000527027 CLRN3Q8NCR9 226 aa10.3□□□□□ -0.76
PTPRU-210ENST00000527027 SMIM7Q9BQ49 75 aa10.3□□□□□ -0.76
PTPRU-210ENST00000527027 RBX1P62877 108 aa10.29□□□□□ -0.76
PTPRU-210ENST00000527027 CENPWQ5EE01 88 aa10.29□□□□□ -0.76
PTPRU-210ENST00000527027 CIRBPQ14011 172 aaKnown RBP10.28□□□□□ -0.76
PTPRU-210ENST00000527027 CLPSL2Q6UWE3 100 aa10.28□□□□□ -0.76
PTPRU-210ENST00000527027 OR10AG1Q8NH19 301 aa10.28□□□□□ -0.76
PTPRU-210ENST00000527027 F5H697 171 aa10.27□□□□□ -0.77
PTPRU-210ENST00000527027 CNBPP62633 177 aaKnown RBP10.27□□□□□ -0.77
PTPRU-210ENST00000527027 SRSF3P84103 164 aaKnown RBP10.27□□□□□ -0.77
PTPRU-210ENST00000527027 GAGE6Q13070 117 aa10.27□□□□□ -0.77
PTPRU-210ENST00000527027 TMEM241Q24JQ0 296 aa10.27□□□□□ -0.77
PTPRU-210ENST00000527027 DPH3Q96FX2 82 aa10.27□□□□□ -0.77
PTPRU-210ENST00000527027 DERL1Q9BUN8 251 aa10.27□□□□□ -0.77
PTPRU-210ENST00000527027 MLST8Q9BVC4 326 aa10.27□□□□□ -0.77
PTPRU-210ENST00000527027 NAT8Q9UHE5 227 aa10.27□□□□□ -0.77
PTPRU-210ENST00000527027 LRP2P98164 4655 aa10.26□□□□□ -0.77
PTPRU-210ENST00000527027 CXCL1P09341 107 aa10.26□□□□□ -0.77
PTPRU-210ENST00000527027 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms