RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 RETNLBQ9BQ08 111 aa3.15□□□□□ -1.91
SF3B2-205ENST00000526653 WDR83OSQ9Y284 106 aa3.15□□□□□ -1.91
SF3B2-205ENST00000526653 TRAV8-4A0A0B4J246 113 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 C7orf66A4D0T2 115 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 H0Y9J4 135 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 OR7C2O60412 319 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 P01737 135 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 IGLV7-43P04211 117 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 CRYGAP11844 174 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 CYCSP99999 105 aaKnown RBP3.14□□□□□ -1.91
SF3B2-205ENST00000526653 SSBP1Q04837 148 aaKnown RBP3.14□□□□□ -1.91
SF3B2-205ENST00000526653 BAXQ07812 192 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 GAGE2BQ13066 116 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 PPP1R1AQ13522 171 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 NTM-AS1Q6ZSK4 140 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 C15orf56Q8N910 161 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 CMTM2Q8TAZ6 248 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 TRIM63Q969Q1 353 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 LINC00526Q96FQ7 95 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 SLIRPQ9GZT3 109 aaKnown RBP3.14□□□□□ -1.91
SF3B2-205ENST00000526653 UQCC1Q9NVA1 299 aa3.14□□□□□ -1.91
SF3B2-205ENST00000526653 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
SF3B2-205ENST00000526653 A0A087X002 238 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 IGKV3OR2-268A0A0C4DH90 116 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 ANKRD20A5PA0PJZ0 165 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 L7N2F9 121 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 CTDSP2O14595 271 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 RGS5O15539 181 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 EIF3GO75821 320 aaKnown RBP eCLIP3.13□□□□□ -1.91
SF3B2-205ENST00000526653 GCGP01275 180 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 KRTAP1-4P0C5Y4 121 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 GZMBP10144 247 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 FGF7P21781 194 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 TAS2R30P59541 319 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 RAB2AP61019 212 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 PKIAP61925 76 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 VAMP2P63027 116 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 EIF5AP63241 154 aaKnown RBP3.13□□□□□ -1.91
SF3B2-205ENST00000526653 SPANXN2Q5MJ10 180 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 PHF5AQ7RTV0 110 aaKnown RBP3.13□□□□□ -1.91
SF3B2-205ENST00000526653 MCFD2Q8NI22 146 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 SMIM4Q8WVI0 70 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 DERL1Q9BUN8 251 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
SF3B2-205ENST00000526653 IGLV4-60A0A075B6I1 120 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 IGLV7-46A0A075B6I9 117 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 A0A087WZ39 114 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 TRBV10-1A0A0K0K1A3 114 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 UBE2L5PA0A1B0GUS4 154 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 GRIFINA4D1Z8 144 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 ARMS2P0C7Q2 107 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 RPL13AP40429 203 aaKnown RBP3.12□□□□□ -1.91
SF3B2-205ENST00000526653 SULT1A2P50226 295 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 GNG5P63218 68 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 MRPS10P82664 201 aaKnown RBP3.12□□□□□ -1.91
SF3B2-205ENST00000526653 IL18Q14116 193 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 IAH1Q2TAA2 248 aaPredicted RBP3.12□□□□□ -1.91
SF3B2-205ENST00000526653 ZFP69Q49AA0 526 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 PRR27Q6MZM9 219 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.12□□□□□ -1.91
SF3B2-205ENST00000526653 C20orf203Q8NBC4 194 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 MITD1Q8WV92 249 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 SFRP2Q96HF1 295 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 OPRPNQ99935 248 aaPredicted RBP3.12□□□□□ -1.91
SF3B2-205ENST00000526653 MIXL1Q9H2W2 232 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 MBD2Q9UBB5 411 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 RAB26Q9ULW5 256 aa3.12□□□□□ -1.91
SF3B2-205ENST00000526653 NDUFAF8A1L188 74 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 C9orf170A2RU37 121 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 H3BVH4 76 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 M0R381 172 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 UBE2L3P68036 154 aaKnown RBP3.11□□□□□ -1.91
SF3B2-205ENST00000526653 C9orf116Q5BN46 136 aaPredicted RBP3.11□□□□□ -1.91
SF3B2-205ENST00000526653 FAM74A1Q5RGS3 127 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 PQLC2Q6ZP29 291 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 THAP6Q8TBB0 222 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 AP3S1Q92572 193 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 SDHCQ99643 169 aaPredicted RBP3.11□□□□□ -1.91
SF3B2-205ENST00000526653 NDFIP1Q9BT67 221 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 OTORQ9NRC9 128 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 OR5AC2Q9NZP5 309 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 LSM5Q9Y4Y9 91 aaKnown RBP3.11□□□□□ -1.91
SF3B2-205ENST00000526653 PHLDA3Q9Y5J5 127 aa3.11□□□□□ -1.91
SF3B2-205ENST00000526653 TRBV25-1A0A075B6N4 114 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 TRBV6-1A0A0K0K1D8 114 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 S100A11P31949 105 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 SMUG1Q53HV7 270 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 PRNTQ86SH4 94 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 KRTAP11-1Q8IUC1 163 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 OR11H4Q8NGC9 324 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 OR10G8Q8NGN5 311 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 FUNDC2Q9BWH2 189 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 NPCDR1Q9BY65 106 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 KRTAP4-3Q9BYR4 195 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 VCX3BQ9H321 246 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 LYRM2Q9NU23 88 aaPredicted RBP3.1□□□□□ -1.91
SF3B2-205ENST00000526653 IL36BQ9NZH7 164 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 PSG8Q9UQ74 426 aa3.1□□□□□ -1.91
SF3B2-205ENST00000526653 MUC17Q685J3 4493 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms