RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 ADCYAP1P18509 176 aa9.33□□□□□ -0.92
CPSF1-201ENST00000526271 RHOHQ15669 191 aa9.33□□□□□ -0.92
CPSF1-201ENST00000526271 UFSP1Q6NVU6 142 aa9.33□□□□□ -0.92
CPSF1-201ENST00000526271 DAZAP1Q96EP5 407 aaKnown RBP9.33□□□□□ -0.92
CPSF1-201ENST00000526271 SEC11CQ9BY50 192 aa9.33□□□□□ -0.92
CPSF1-201ENST00000526271 JPT2Q9H910 190 aa9.33□□□□□ -0.92
CPSF1-201ENST00000526271 B4DEV8 164 aa9.32□□□□□ -0.92
CPSF1-201ENST00000526271 CIDEAO60543 219 aa9.32□□□□□ -0.92
CPSF1-201ENST00000526271 CXCL1P09341 107 aa9.32□□□□□ -0.92
CPSF1-201ENST00000526271 C10orf91Q5T1B1 145 aa9.32□□□□□ -0.92
CPSF1-201ENST00000526271 ATP6V0E2Q8NHE4 81 aa9.32□□□□□ -0.92
CPSF1-201ENST00000526271 CIRBP-AS1Q8TBR5 109 aa9.32□□□□□ -0.92
CPSF1-201ENST00000526271 ISOC2Q96AB3 205 aa9.32□□□□□ -0.92
CPSF1-201ENST00000526271 SAMD10Q9BYL1 202 aa9.32□□□□□ -0.92
CPSF1-201ENST00000526271 RNASE7Q9H1E1 156 aaKnown RBP9.32□□□□□ -0.92
CPSF1-201ENST00000526271 F8W036 122 aa9.31□□□□□ -0.92
CPSF1-201ENST00000526271 M0R036 132 aa9.31□□□□□ -0.92
CPSF1-201ENST00000526271 P01737 135 aa9.31□□□□□ -0.92
CPSF1-201ENST00000526271 NDUFA5Q16718 116 aa9.31□□□□□ -0.92
CPSF1-201ENST00000526271 SLC7A5P1Q8MH63 180 aa9.31□□□□□ -0.92
CPSF1-201ENST00000526271 PTH2Q96A98 100 aa9.31□□□□□ -0.92
CPSF1-201ENST00000526271 OSTCQ9NRP0 149 aa9.31□□□□□ -0.92
CPSF1-201ENST00000526271 GAGE12JA6NER3 117 aa9.3□□□□□ -0.92
CPSF1-201ENST00000526271 RPL19P84098 196 aaKnown RBP9.3□□□□□ -0.92
CPSF1-201ENST00000526271 PNRC1Q12796 327 aaPredicted RBP9.3□□□□□ -0.92
CPSF1-201ENST00000526271 GAGE1Q13065 139 aa9.3□□□□□ -0.92
CPSF1-201ENST00000526271 GAGE4Q13068 117 aa9.3□□□□□ -0.92
CPSF1-201ENST00000526271 GAGE5Q13069 117 aa9.3□□□□□ -0.92
CPSF1-201ENST00000526271 GAGE13Q4V321 117 aa9.3□□□□□ -0.92
CPSF1-201ENST00000526271 C14orf178Q8N769 122 aaPredicted RBP9.3□□□□□ -0.92
CPSF1-201ENST00000526271 PRADC1Q9BSG0 188 aa9.3□□□□□ -0.92
CPSF1-201ENST00000526271 CHAC1Q9BUX1 264 aa9.3□□□□□ -0.92
CPSF1-201ENST00000526271 LRP2P98164 4655 aa9.3□□□□□ -0.92
CPSF1-201ENST00000526271 TMSB15BA0A087X1C1 80 aa9.29□□□□□ -0.92
CPSF1-201ENST00000526271 GRIFINA4D1Z8 144 aa9.29□□□□□ -0.92
CPSF1-201ENST00000526271 GATCO43716 136 aaKnown RBP9.29□□□□□ -0.92
CPSF1-201ENST00000526271 RPS20P60866 119 aaKnown RBP9.29□□□□□ -0.92
CPSF1-201ENST00000526271 ADIRFQ15847 76 aa9.29□□□□□ -0.92
CPSF1-201ENST00000526271 OR2D3Q8NGH3 330 aa9.29□□□□□ -0.92
CPSF1-201ENST00000526271 SFRP2Q96HF1 295 aa9.29□□□□□ -0.92
CPSF1-201ENST00000526271 SSBP4Q9BWG4 385 aaPredicted RBP9.29□□□□□ -0.92
CPSF1-201ENST00000526271 TM2D2Q9BX73 214 aa9.29□□□□□ -0.92
CPSF1-201ENST00000526271 RPP21Q9H633 154 aaKnown RBP9.29□□□□□ -0.92
CPSF1-201ENST00000526271 IL36BQ9NZH7 164 aa9.29□□□□□ -0.92
CPSF1-201ENST00000526271 TNXBP22105 4242 aa9.29□□□□□ -0.92
CPSF1-201ENST00000526271 ARMS2P0C7Q2 107 aa9.28□□□□□ -0.92
CPSF1-201ENST00000526271 ASIPP42127 132 aa9.28□□□□□ -0.92
CPSF1-201ENST00000526271 CT83Q5H943 113 aa9.28□□□□□ -0.92
CPSF1-201ENST00000526271 CARHSP1Q9Y2V2 147 aaKnown RBP9.28□□□□□ -0.92
CPSF1-201ENST00000526271 S100A4P26447 101 aaKnown RBP9.27□□□□□ -0.93
CPSF1-201ENST00000526271 SERTAD4-AS1Q5TG53 156 aa9.27□□□□□ -0.93
CPSF1-201ENST00000526271 OR10G8Q8NGN5 311 aa9.27□□□□□ -0.93
CPSF1-201ENST00000526271 V9GYV3 84 aa9.27□□□□□ -0.93
CPSF1-201ENST00000526271 TRAV8-3A0A0A6YYJ7 113 aa9.26□□□□□ -0.93
CPSF1-201ENST00000526271 XKRY2A2RUG3 117 aa9.26□□□□□ -0.93
CPSF1-201ENST00000526271 SNAI2O43623 268 aa9.26□□□□□ -0.93
CPSF1-201ENST00000526271 IGLC6P0CF74 106 aa9.26□□□□□ -0.93
CPSF1-201ENST00000526271 MT1HL1P0DM35 61 aa9.26□□□□□ -0.93
CPSF1-201ENST00000526271 GZMBP10144 247 aa9.26□□□□□ -0.93
CPSF1-201ENST00000526271 FOXA3P55318 350 aaPredicted RBP9.26□□□□□ -0.93
CPSF1-201ENST00000526271 NIT1Q86X76 327 aa9.26□□□□□ -0.93
CPSF1-201ENST00000526271 C15orf54Q8N8G6 183 aa9.26□□□□□ -0.93
CPSF1-201ENST00000526271 A8MWL6 223 aa9.25□□□□□ -0.93
CPSF1-201ENST00000526271 H3BVH4 76 aa9.25□□□□□ -0.93
CPSF1-201ENST00000526271 OXTP01178 125 aa9.25□□□□□ -0.93
CPSF1-201ENST00000526271 OR5AL1P0C617 328 aa9.25□□□□□ -0.93
CPSF1-201ENST00000526271 PIK3CD-AS1Q5SR53 167 aa9.25□□□□□ -0.93
CPSF1-201ENST00000526271 FAM231BA6NCW3 169 aa9.24□□□□□ -0.93
CPSF1-201ENST00000526271 PANO1I0J062 215 aa9.24□□□□□ -0.93
CPSF1-201ENST00000526271 ATRAIDQ6UW56 229 aa9.24□□□□□ -0.93
CPSF1-201ENST00000526271 ZFP2Q6ZN57 461 aa9.24□□□□□ -0.93
CPSF1-201ENST00000526271 TSKUQ8WUA8 353 aa9.24□□□□□ -0.93
CPSF1-201ENST00000526271 GTSF1Q8WW33 167 aa9.24□□□□□ -0.93
CPSF1-201ENST00000526271 ANAPC16Q96DE5 110 aa9.24□□□□□ -0.93
CPSF1-201ENST00000526271 GFRA4Q9GZZ7 299 aa9.24□□□□□ -0.93
CPSF1-201ENST00000526271 A8MWV9 139 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 F2Z2F3 143 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 PPP1R2P9O14990 202 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 MT-ND4LP03901 98 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 WDR73Q6P4I2 378 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 FER1L6-AS1Q8NA97 138 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 KLK12Q9UKR0 248 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 PLA2G2DQ9UNK4 145 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 PHLDA3Q9Y5J5 127 aa9.23□□□□□ -0.93
CPSF1-201ENST00000526271 SMIM27A0A1W2PRY6 76 aa9.22□□□□□ -0.93
CPSF1-201ENST00000526271 LYZL1Q6UWQ5 148 aa9.22□□□□□ -0.93
CPSF1-201ENST00000526271 SYT8Q8NBV8 401 aa9.22□□□□□ -0.93
CPSF1-201ENST00000526271 CLRN3Q8NCR9 226 aa9.22□□□□□ -0.93
CPSF1-201ENST00000526271 CNFNQ9BYD5 112 aa9.22□□□□□ -0.93
CPSF1-201ENST00000526271 IGKV2D-24A0A075B6R9 120 aa9.21□□□□□ -0.94
CPSF1-201ENST00000526271 APOC3P02656 99 aa9.21□□□□□ -0.94
CPSF1-201ENST00000526271 CTRLP40313 264 aa9.21□□□□□ -0.94
CPSF1-201ENST00000526271 ENHOQ6UWT2 76 aa9.21□□□□□ -0.94
CPSF1-201ENST00000526271 ZFP82Q8N141 532 aa9.21□□□□□ -0.94
CPSF1-201ENST00000526271 Q8N976 141 aa9.21□□□□□ -0.94
CPSF1-201ENST00000526271 OR10AG1Q8NH19 301 aa9.21□□□□□ -0.94
CPSF1-201ENST00000526271 CTDSP1Q9GZU7 261 aa9.21□□□□□ -0.94
CPSF1-201ENST00000526271 C7orf77A4D0Y5 90 aa9.2□□□□□ -0.94
CPSF1-201ENST00000526271 HIGD1CA8MV81 97 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms