RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 AKR1D1P51857 326 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 CRYBA4P53673 196 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 ARF6P62330 175 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 RBM3P98179 157 aaKnown RBP-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 SSBP1Q04837 148 aaKnown RBP-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 OR8B8Q15620 311 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 TMEM78Q5T7P6 136 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 Q5VV11 94 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 UNQ5815/PRO19632Q6UWF5 114 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 NDUFA11Q86Y39 141 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 UBE2DNLQ8IWF7 75 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 Q8IZM0 81 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 PHB2Q99623 299 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 BATF3Q9NR55 127 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 METTL1Q9UBP6 276 aaKnown RBP-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 LAMTOR3Q9UHA4 124 aa-0.47□□□□□ -2.48
CSDE1-210ENST00000525878 SACSQ9NZJ4 4579 aa-0.47□□□□□ -2.49
CSDE1-210ENST00000525878 RGPD2P0DJD1 1756 aa-0.47□□□□□ -2.49
CSDE1-210ENST00000525878 ZNF609O15014 1411 aa-0.47□□□□□ -2.49
CSDE1-210ENST00000525878 FOCADQ5VW36 1801 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 PXDNQ92626 1479 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 PDCD11Q14690 1871 aaKnown RBP-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 DNHD1Q96M86 4753 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 A0A0D9SFI3 127 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 TCRBV3S1A0A5B6 114 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 PPP5D1E7EU14 171 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 H3BMG7 143 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 K7EQZ3 153 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 M0QZK8 103 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 UQCRQO14949 82 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 DEGS1O15121 323 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 KALRNO60229 2985 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 IFNA21P01568 189 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 APOC1P02654 83 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 SLC25A5P05141 298 aaKnown RBP-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 SLC25A6P12236 298 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 RPL7P18124 248 aaKnown RBP-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 CKS2P33552 79 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 POLR2HP52434 150 aaKnown RBP-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 BASP1P80723 227 aaKnown RBP-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 MRPS15P82914 257 aaKnown RBP-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 REEP5Q00765 189 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 PLGLB1Q02325 96 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 HSD17B12Q53GQ0 312 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 SLC48A1Q6P1K1 146 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 CYP2G1PQ6ZSU1 146 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 SLC25A26Q70HW3 274 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 C4orf33Q8N1A6 199 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 C20orf197Q8N268 126 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 COX7B2Q8TF08 81 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 THEM6Q8WUY1 208 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 PPP1R1CQ8WVI7 109 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 IFI27L1Q96BM0 104 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 HOPXQ9BPY8 73 aaPredicted RBP-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 WFDC6Q9BQY6 131 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 BOLA2Q9H3K6 86 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 TAS2R8Q9NYW2 309 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 MED31Q9Y3C7 131 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 UFC1Q9Y3C8 167 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 CEP152O94986 1710 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 NUP188Q5SRE5 1749 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 BIRC6Q9NR09 4857 aa-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 PLECQ15149 4684 aaKnown RBP-0.48□□□□□ -2.49
CSDE1-210ENST00000525878 KIAA0556O60303 1618 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 TET3O43151 1660 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 RIMS1Q86UR5 1692 aaKnown RBP-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 ARAP2Q8WZ64 1704 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 MARF1Q9Y4F3 1742 aaKnown RBP-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 TRANK1O15050 2925 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 DMXL1Q9Y485 3027 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 LAMA2P24043 3122 aaKnown RBP-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 TRAV12-3A0A0B4J271 114 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 TRAV22A0A0B4J277 110 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 PNMA8CA0A1B0GUJ8 204 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 A0A1W2PRE2 83 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 MAP1LC3B2A6NCE7 125 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 M0R2P5 195 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 PIN1P1O15428 100 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 TCRAP04437 139 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 S100A6P06703 90 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 PCBD1P61457 104 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 HAMPP81172 84 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 TMED2Q15363 201 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 STX19Q8N4C7 294 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 FAM24BQ8N5W8 94 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 BRK1Q8WUW1 75 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 LXNQ9BS40 222 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 SLC35B3Q9H1N7 401 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 MED11Q9P086 117 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 LAMTOR2Q9Y2Q5 125 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 DNAJC15Q9Y5T4 150 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 V9GYV3 84 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 ROCK1Q13464 1354 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 IBTKQ9P2D0 1353 aaPredicted RBP-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 ERCC6Q03468 1493 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 ACACAQ13085 2346 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 SYNJ1O43426 1573 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 ARHGEF5Q12774 1597 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 ERCC6L2Q5T890 1561 aa-0.49□□□□□ -2.49
CSDE1-210ENST00000525878 FAM186AA6NE01 2351 aa-0.49□□□□□ -2.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms