RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 CGB1A6NKQ9 187 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 LINC00473A8K010 186 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 C17orf100A8MU93 164 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 F8VRH5 84 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 H3BVH4 76 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 PPP1R17O96001 155 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 IGKV3-15P01624 115 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 CA6P23280 308 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 CKS2P33552 79 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 MYCNOSP40205 109 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 SEC61GP60059 68 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 ERHP84090 104 aaKnown RBP3.84□□□□□ -1.79
CD44-218ENST00000525469 EIF4EBP1Q13541 118 aaPredicted RBP3.84□□□□□ -1.79
CD44-218ENST00000525469 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 SCGB1D4Q6XE38 83 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 BRD3OSQ6XYD6 125 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 Q6ZSV7 163 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 ABHD12Q8N2K0 398 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 C8orf31Q8N9H6 132 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 TMEM75Q8N9X5 138 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 CCL17Q92583 94 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 NABP1Q96AH0 204 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 CARD19Q96LW7 228 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 S1PR3Q99500 378 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 EMC6Q9BV81 110 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 C16orf95Q9H693 158 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 OTORQ9NRC9 128 aa3.84□□□□□ -1.79
CD44-218ENST00000525469 WI2-2373I1.2A0A1W2PRP0 233 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 K7ERJ3 54 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 EDN2P20800 178 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 IFI27P40305 119 aaPredicted RBP3.83□□□□□ -1.8
CD44-218ENST00000525469 ATP5EP56381 51 aaPredicted RBP3.83□□□□□ -1.8
CD44-218ENST00000525469 GNG5P63218 68 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 PAX8Q06710 450 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 ZNF816Q0VGE8 651 aaPredicted RBP3.83□□□□□ -1.8
CD44-218ENST00000525469 ORMDL2Q53FV1 153 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 C6orf226Q5I0X4 101 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 Q8N8P6 123 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 FLYWCH2Q96CP2 140 aaKnown RBP3.83□□□□□ -1.8
CD44-218ENST00000525469 ZC2HC1AQ96GY0 325 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 TMEM14BQ9NUH8 114 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 TMEM14CQ9P0S9 112 aa3.83□□□□□ -1.8
CD44-218ENST00000525469 TIMM8BQ9Y5J9 83 aaPredicted RBP3.83□□□□□ -1.8
CD44-218ENST00000525469 TRAV13-1A0A0B4J241 112 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 TRBV30A0A0K0K1B3 111 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 BCE1O60756 84 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 TCRAP04437 139 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 CD7P09564 240 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 INAFM2P0DMQ5 153 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 PSMB8P28062 276 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 PRCDQ00LT1 54 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 EBI3Q14213 229 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 IZUMO4Q1ZYL8 232 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 DUX4L9Q6RFH8 374 aaPredicted RBP3.82□□□□□ -1.8
CD44-218ENST00000525469 SIGLEC15Q6ZMC9 328 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 Q6ZR03 302 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 GOLT1AQ6ZVE7 132 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 Q86TA4 180 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 MDP1Q86V88 176 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 NDUFA11Q86Y39 141 aa3.82□□□□□ -1.8
CD44-218ENST00000525469 RPUSD1Q9UJJ7 312 aaKnown RBP3.82□□□□□ -1.8
CD44-218ENST00000525469 A0A096LNJ9 63 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 FAM236AA0A1B0GUQ0 79 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 FAM236BA0A1B0GV22 79 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 TINCRA0A1B0GVN0 87 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 LINC01548A6NM66 108 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 D6R8Y8 96 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 TIMM8AO60220 97 aaPredicted RBP3.81□□□□□ -1.8
CD44-218ENST00000525469 TCL1BO95988 128 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 IGHV4-59P01825 116 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 B4GALT1P15291 398 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 LEPP41159 167 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 ZNF137PP52743 207 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 LAGE3Q14657 143 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 ZNF56Q15929 161 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 RSPO1Q2MKA7 263 aaPredicted RBP3.81□□□□□ -1.8
CD44-218ENST00000525469 LINC01620Q4KN68 170 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 S100A7L2Q5SY68 101 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 COX8CQ7Z4L0 72 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 TRPT1Q86TN4 253 aaKnown RBP3.81□□□□□ -1.8
CD44-218ENST00000525469 GTSCR1Q86UQ5 136 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 APRG1Q8IVJ8 170 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 THAP8Q8NA92 274 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 RFESDQ8TAC1 157 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 DPH3Q96FX2 82 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 FAM167A-AS1Q96KT0 104 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 ODF3Q96PU9 254 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 PCLOQ9Y6V0 5065 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 RYR2Q92736 4967 aa3.81□□□□□ -1.8
CD44-218ENST00000525469 IGHV1-69DA0A0B4J2H0 117 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 ZNF815PA8K554 130 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 C17orf98A8MV24 154 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 HSPB6O14558 160 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 SPRY3O43610 288 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 FCGR3BO75015 233 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 CFC1BP0CG36 223 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 CFC1P0CG37 223 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 PYYP10082 97 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 NPC2P61916 151 aa3.8□□□□□ -1.8
CD44-218ENST00000525469 PDE6HQ13956 83 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms