RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 ATP11AUNQ6ZP68 121 aa2.56□□□□□ -2
CTNNA1-238ENST00000523298 PFN4Q8NHR9 129 aa2.56□□□□□ -2
CTNNA1-238ENST00000523298 AQP3Q92482 292 aa2.56□□□□□ -2
CTNNA1-238ENST00000523298 SPTSSAQ969W0 71 aa2.56□□□□□ -2
CTNNA1-238ENST00000523298 CYTL1Q9NRR1 136 aa2.56□□□□□ -2
CTNNA1-238ENST00000523298 PLXNA2O75051 1894 aa2.56□□□□□ -2
CTNNA1-238ENST00000523298 NOTCH2Q04721 2471 aa2.56□□□□□ -2
CTNNA1-238ENST00000523298 TTC28Q96AY4 2481 aa2.56□□□□□ -2
CTNNA1-238ENST00000523298 COL6A3P12111 3177 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 IGHV7-4-1A0A0J9YVY3 117 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 IGLV3-25P01717 112 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 HMGA1P17096 107 aaKnown RBP2.55□□□□□ -2
CTNNA1-238ENST00000523298 ZNF345Q14585 488 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 ASB16-AS1Q495Z4 193 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 XAF1Q6GPH4 301 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 KRTAP5-5Q701N2 237 aaPredicted RBP2.55□□□□□ -2
CTNNA1-238ENST00000523298 HMGN2P46Q86SG4 172 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 DEFB106AQ8N104 65 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 OR8B3Q8NGG8 313 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 CIRBP-AS1Q8TBR5 109 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 SCGB3A1Q96QR1 104 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 CYSTM1Q9H1C7 97 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 CCL26Q9Y258 94 aa2.55□□□□□ -2
CTNNA1-238ENST00000523298 CUL9Q8IWT3 2517 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 TANC2Q9HCD6 1990 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 TNRC6BQ9UPQ9 1833 aaKnown RBP2.54□□□□□ -2
CTNNA1-238ENST00000523298 IGKV2-28A0A075B6P5 120 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 TRAV17A0A0B4J275 112 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 A0A1W2PQD3 144 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 UMAD1C9J7I0 102 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 J3QLW9 94 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 IGKV2D-28P01615 120 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 CCKP06307 115 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 IGHV3-30-3P0DP02 117 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 C16orf47Q6ZP98 133 aaPredicted RBP2.54□□□□□ -2
CTNNA1-238ENST00000523298 COMMD6Q7Z4G1 85 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 SERP2Q8N6R1 65 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 OR8B2Q96RD0 313 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 MGST2Q99735 147 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 ZNRD1Q9P1U0 126 aa2.54□□□□□ -2
CTNNA1-238ENST00000523298 MUC22E2RYF6 1773 aaPredicted RBP2.54□□□□□ -2
CTNNA1-238ENST00000523298 BDP1A6H8Y1 2624 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 IGLV3-12A0A075B6K2 115 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 IGKV1D-17A0A075B6S4 117 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 IGHV3-21A0A0B4J1V1 117 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 TMEM223A0PJW6 202 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 NAP1L6A6NFF2 107 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 A8MWP4 228 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 C17orf112F2Z3M2 114 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 CKS2P33552 79 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 LY6EQ16553 131 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 CFAP126Q5VTH2 177 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 CNEP1R1Q8N9A8 125 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 CHCHD1Q96BP2 118 aaKnown RBP2.53□□□□□ -2
CTNNA1-238ENST00000523298 LINC01600Q96MT4 127 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 ODF3Q96PU9 254 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 TRGV9Q99603 122 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 SMDT1Q9H4I9 107 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 LINC00474Q9P2X8 69 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 V9GYH0 126 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 UNC80Q8N2C7 3258 aa2.53□□□□□ -2
CTNNA1-238ENST00000523298 ASCC3Q8N3C0 2202 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 UNC13CQ8NB66 2214 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 TRAV2A0A0B4J234 112 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 LOC730098B7Z3J9 87 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 K7ERS5 55 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 LECT2O14960 151 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 SNRNP200O75643 2136 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 IGLV1-51P01701 117 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 PIRTP0C851 137 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 PTHLHP12272 177 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 PEBP1P30086 187 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 MPV17P39210 176 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 FXYD7P58549 80 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 SUPT4H1P63272 117 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 RBM3P98179 157 aaKnown RBP2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 Q1T7F1 81 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 TMEM256Q8N2U0 113 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 CMTM2Q8TAZ6 248 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 RETNLBQ9BQ08 111 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 CHCHD7Q9BUK0 85 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 KRTAP4-3Q9BYR4 195 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 PCDH15Q96QU1 1955 aa2.52□□□□□ -2.01
CTNNA1-238ENST00000523298 RP1P56715 2156 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 TRIOO75962 3097 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 EXPH5Q8NEV8 1989 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 IGLV4-60A0A075B6I1 120 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 IGHV3-49A0A0A0MS15 119 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 IGHV1-24A0A0C4DH33 117 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 KANTRA0A1W2PQU2 76 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 C19orf71A6NCJ1 209 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 BPY2O14599 106 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 LYRM1O43325 122 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 IGKV1D-33P01593 117 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 IGKV1-33P01594 117 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 IGHV1-69P01742 117 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 APCSP02743 223 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 CISD3P0C7P0 127 aa2.51□□□□□ -2.01
CTNNA1-238ENST00000523298 ASAH2BP0C7U1 165 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms