RNA–Protein interactions for RNA: ENST00000521127.1

SNHG6-204, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2

Gene SNHG6, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-204ENST00000521127 GCGP01275 180 aa12.2□□□□□ -0.46
SNHG6-204ENST00000521127 C15orf54Q8N8G6 183 aa12.2□□□□□ -0.46
SNHG6-204ENST00000521127 LINC00479Q96M42 142 aa12.2□□□□□ -0.46
SNHG6-204ENST00000521127 C9orf85Q96MD7 179 aa12.2□□□□□ -0.46
SNHG6-204ENST00000521127 CHAC1Q9BUX1 264 aa12.2□□□□□ -0.46
SNHG6-204ENST00000521127 PLA2G2DQ9UNK4 145 aa12.2□□□□□ -0.46
SNHG6-204ENST00000521127 COLCA2A8K830 154 aa12.19□□□□□ -0.46
SNHG6-204ENST00000521127 PPP1R2P9O14990 202 aa12.19□□□□□ -0.46
SNHG6-204ENST00000521127 LTAP01374 205 aa12.19□□□□□ -0.46
SNHG6-204ENST00000521127 ZNF80P51504 273 aaPredicted RBP12.19□□□□□ -0.46
SNHG6-204ENST00000521127 Q86TA4 180 aa12.19□□□□□ -0.46
SNHG6-204ENST00000521127 PKHD1L1Q86WI1 4243 aa12.19□□□□□ -0.46
SNHG6-204ENST00000521127 LINC00694P0DN24 101 aa12.18□□□□□ -0.46
SNHG6-204ENST00000521127 UBE2G1P62253 170 aa12.18□□□□□ -0.46
SNHG6-204ENST00000521127 CIRBP-AS1Q8TBR5 109 aa12.18□□□□□ -0.46
SNHG6-204ENST00000521127 SFRP2Q96HF1 295 aa12.18□□□□□ -0.46
SNHG6-204ENST00000521127 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
SNHG6-204ENST00000521127 SGK494Q96LW2 274 aa12.18□□□□□ -0.46
SNHG6-204ENST00000521127 Q9UF83 564 aa12.18□□□□□ -0.46
SNHG6-204ENST00000521127 TRAV34A0A0B4J273 112 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 GAGE12JA6NER3 117 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 MGST1P10620 155 aaKnown RBP12.17□□□□□ -0.46
SNHG6-204ENST00000521127 GAGE1Q13065 139 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 GAGE4Q13068 117 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 GAGE5Q13069 117 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 GAGE13Q4V321 117 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 FAM231DQ6ZW35 169 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 BAGE2Q86Y30 109 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 PTH2Q96A98 100 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 OSTCQ9NRP0 149 aa12.17□□□□□ -0.46
SNHG6-204ENST00000521127 K7EQM0 130 aa12.16□□□□□ -0.46
SNHG6-204ENST00000521127 COX8CQ7Z4L0 72 aa12.16□□□□□ -0.46
SNHG6-204ENST00000521127 IMMP2LQ96T52 175 aa12.16□□□□□ -0.46
SNHG6-204ENST00000521127 RNASE3P12724 160 aaKnown RBP12.15□□□□□ -0.46
SNHG6-204ENST00000521127 FLI1Q01543 452 aaPredicted RBP12.15□□□□□ -0.46
SNHG6-204ENST00000521127 ELOBQ15370 118 aa12.15□□□□□ -0.46
SNHG6-204ENST00000521127 Q8N976 141 aa12.15□□□□□ -0.46
SNHG6-204ENST00000521127 OR10G8Q8NGN5 311 aa12.15□□□□□ -0.46
SNHG6-204ENST00000521127 ZFP30Q9Y2G7 519 aa12.15□□□□□ -0.46
SNHG6-204ENST00000521127 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
SNHG6-204ENST00000521127 COX11Q9Y6N1 276 aa12.14□□□□□ -0.47
SNHG6-204ENST00000521127 V9GYV3 84 aa12.14□□□□□ -0.47
SNHG6-204ENST00000521127 TRBV24-1A0A075B6N3 115 aa12.13□□□□□ -0.47
SNHG6-204ENST00000521127 SAMD10Q9BYL1 202 aa12.13□□□□□ -0.47
SNHG6-204ENST00000521127 BIN3Q9NQY0 253 aa12.13□□□□□ -0.47
SNHG6-204ENST00000521127 C19orf71A6NCJ1 209 aa12.12□□□□□ -0.47
SNHG6-204ENST00000521127 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.12□□□□□ -0.47
SNHG6-204ENST00000521127 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
SNHG6-204ENST00000521127 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
SNHG6-204ENST00000521127 ZFP2Q6ZN57 461 aa12.11□□□□□ -0.47
SNHG6-204ENST00000521127 NIT1Q86X76 327 aa12.11□□□□□ -0.47
SNHG6-204ENST00000521127 C14orf178Q8N769 122 aaPredicted RBP12.11□□□□□ -0.47
SNHG6-204ENST00000521127 RMI2Q96E14 147 aa12.11□□□□□ -0.47
SNHG6-204ENST00000521127 JPT2Q9H910 190 aa12.11□□□□□ -0.47
SNHG6-204ENST00000521127 TRAV9-1A0A075B6T8 112 aa12.1□□□□□ -0.47
SNHG6-204ENST00000521127 HNRNPA3P51991 378 aaKnown RBP12.1□□□□□ -0.47
SNHG6-204ENST00000521127 CT83Q5H943 113 aa12.1□□□□□ -0.47
SNHG6-204ENST00000521127 UFSP1Q6NVU6 142 aa12.1□□□□□ -0.47
SNHG6-204ENST00000521127 PRNTQ86SH4 94 aa12.1□□□□□ -0.47
SNHG6-204ENST00000521127 RNASE7Q9H1E1 156 aaKnown RBP12.1□□□□□ -0.47
SNHG6-204ENST00000521127 IL36BQ9NZH7 164 aa12.1□□□□□ -0.47
SNHG6-204ENST00000521127 KLK12Q9UKR0 248 aa12.1□□□□□ -0.47
SNHG6-204ENST00000521127 CXCL1P09341 107 aa12.09□□□□□ -0.47
SNHG6-204ENST00000521127 RAB5AP20339 215 aa12.09□□□□□ -0.47
SNHG6-204ENST00000521127 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
SNHG6-204ENST00000521127 A8MWV9 139 aa12.08□□□□□ -0.48
SNHG6-204ENST00000521127 S100PP25815 95 aa12.08□□□□□ -0.48
SNHG6-204ENST00000521127 NUDT10Q8NFP7 164 aa12.08□□□□□ -0.48
SNHG6-204ENST00000521127 DAZAP1Q96EP5 407 aaKnown RBP12.08□□□□□ -0.48
SNHG6-204ENST00000521127 NUDT11Q96G61 164 aa12.08□□□□□ -0.48
SNHG6-204ENST00000521127 ZC2HC1AQ96GY0 325 aa12.08□□□□□ -0.48
SNHG6-204ENST00000521127 URGCP-MRPS24S4R325 110 aa12.08□□□□□ -0.48
SNHG6-204ENST00000521127 TGIF2-C20orf24A0A0A6YYL0 155 aa12.07□□□□□ -0.48
SNHG6-204ENST00000521127 IGKV3D-20A0A0C4DH25 116 aa12.07□□□□□ -0.48
SNHG6-204ENST00000521127 SMUG1Q53HV7 270 aa12.07□□□□□ -0.48
SNHG6-204ENST00000521127 KCNIP4Q6PIL6 250 aa12.07□□□□□ -0.48
SNHG6-204ENST00000521127 UBE2WQ96B02 151 aa12.07□□□□□ -0.48
SNHG6-204ENST00000521127 BTF3L4Q96K17 158 aa12.07□□□□□ -0.48
SNHG6-204ENST00000521127 SMIM27A0A1W2PRY6 76 aa12.06□□□□□ -0.48
SNHG6-204ENST00000521127 GATCO43716 136 aaKnown RBP12.06□□□□□ -0.48
SNHG6-204ENST00000521127 RPL37AP61513 92 aaKnown RBP12.06□□□□□ -0.48
SNHG6-204ENST00000521127 PIK3CD-AS1Q5SR53 167 aa12.06□□□□□ -0.48
SNHG6-204ENST00000521127 CRIP1P50238 77 aa12.05□□□□□ -0.48
SNHG6-204ENST00000521127 S100A4P26447 101 aaKnown RBP12.04□□□□□ -0.48
SNHG6-204ENST00000521127 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
SNHG6-204ENST00000521127 PRR27Q6MZM9 219 aa12.04□□□□□ -0.48
SNHG6-204ENST00000521127 RPP21Q9H633 154 aaKnown RBP12.04□□□□□ -0.48
SNHG6-204ENST00000521127 FAM231BA6NCW3 169 aa12.03□□□□□ -0.48
SNHG6-204ENST00000521127 MT1HL1P0DM35 61 aa12.03□□□□□ -0.48
SNHG6-204ENST00000521127 TSKUQ8WUA8 353 aa12.03□□□□□ -0.48
SNHG6-204ENST00000521127 GFRA4Q9GZZ7 299 aa12.03□□□□□ -0.48
SNHG6-204ENST00000521127 P01737 135 aa12.02□□□□□ -0.49
SNHG6-204ENST00000521127 ASIPP42127 132 aa12.02□□□□□ -0.49
SNHG6-204ENST00000521127 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.49
SNHG6-204ENST00000521127 A0A087WX48 190 aa12.01□□□□□ -0.49
SNHG6-204ENST00000521127 PHOX2AO14813 284 aa12.01□□□□□ -0.49
SNHG6-204ENST00000521127 CHCHD7Q9BUK0 85 aa12.01□□□□□ -0.49
SNHG6-204ENST00000521127 A8MWL6 223 aa12□□□□□ -0.49
SNHG6-204ENST00000521127 SH2D1AO60880 128 aa12□□□□□ -0.49
SNHG6-204ENST00000521127 FOXA3P55318 350 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms