RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 CIRBPQ14011 172 aaKnown RBP6.34□□□□□ -1.39
SHPRH-208ENST00000520752 CCL13Q99616 98 aa6.34□□□□□ -1.39
SHPRH-208ENST00000520752 RAI1Q7Z5J4 1906 aaPredicted RBP6.34□□□□□ -1.39
SHPRH-208ENST00000520752 INTS1Q8N201 2190 aaKnown RBP6.33□□□□□ -1.4
SHPRH-208ENST00000520752 IGHV1-58A0A0C4DH39 117 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 IGKV3D-7A0A0C4DH55 119 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 LMO7DNF2Z398 122 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 M0R1W7 72 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 SOCS3O14543 225 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 IGHV3-48P01763 117 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 RFPL3SP0C7P2 107 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 POLR2KP53803 58 aaKnown RBP6.33□□□□□ -1.4
SHPRH-208ENST00000520752 MRPL55Q7Z7F7 128 aaKnown RBP6.33□□□□□ -1.4
SHPRH-208ENST00000520752 DEFB123Q8N688 67 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 RNASE6Q93091 150 aaKnown RBP6.33□□□□□ -1.4
SHPRH-208ENST00000520752 RNF5Q99942 180 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 RETNQ9HD89 108 aa6.33□□□□□ -1.4
SHPRH-208ENST00000520752 PCNX2A6NKB5 2137 aa6.32□□□□□ -1.4
SHPRH-208ENST00000520752 TTC28Q96AY4 2481 aa6.32□□□□□ -1.4
SHPRH-208ENST00000520752 LHBP01229 141 aa6.32□□□□□ -1.4
SHPRH-208ENST00000520752 HCP5Q6MZN7 132 aa6.32□□□□□ -1.4
SHPRH-208ENST00000520752 RNF7Q9UBF6 113 aa6.32□□□□□ -1.4
SHPRH-208ENST00000520752 C22orf24Q9Y442 160 aa6.32□□□□□ -1.4
SHPRH-208ENST00000520752 TRBV27A0A0K0K1C4 114 aa6.31□□□□□ -1.4
SHPRH-208ENST00000520752 ERC2-IT1O76042 136 aa6.31□□□□□ -1.4
SHPRH-208ENST00000520752 IGHV3-30-3P0DP02 117 aa6.31□□□□□ -1.4
SHPRH-208ENST00000520752 C10orf55Q5SWW7 151 aa6.31□□□□□ -1.4
SHPRH-208ENST00000520752 GPHB5Q86YW7 130 aa6.31□□□□□ -1.4
SHPRH-208ENST00000520752 LEAP2Q969E1 77 aa6.31□□□□□ -1.4
SHPRH-208ENST00000520752 NDUFA12Q9UI09 145 aa6.31□□□□□ -1.4
SHPRH-208ENST00000520752 MED12Q93074 2177 aa6.31□□□□□ -1.4
SHPRH-208ENST00000520752 FER1L5A0AVI2 2057 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 LYRM9A8MSI8 78 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 H0YGX0 51 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 NDUFB3O43676 98 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 BLCAPP62952 87 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 MRGPRG-AS1Q2M3A8 158 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 IGFL2Q6UWQ7 119 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 C9orf47Q6ZRZ4 202 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 STHQ8IWL8 128 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 Q8TAT8 98 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 LINC00846Q9NV44 126 aa6.3□□□□□ -1.4
SHPRH-208ENST00000520752 NCOR1O75376 2440 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 UNC80Q8N2C7 3258 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 TEX22C9J3V5 150 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 SAA4P35542 130 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 RPL28P46779 137 aaKnown RBP6.29□□□□□ -1.4
SHPRH-208ENST00000520752 HILS1P60008 231 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 RUSC1-AS1Q66K80 236 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 PMS2CLQ68D20 193 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 FAM110DQ8TAY7 271 aaPredicted RBP6.29□□□□□ -1.4
SHPRH-208ENST00000520752 DYNLRB2Q8TF09 96 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 RPL39LQ96EH5 51 aaKnown RBP6.29□□□□□ -1.4
SHPRH-208ENST00000520752 DOCK7Q96N67 2140 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 TNCP24821 2201 aa6.29□□□□□ -1.4
SHPRH-208ENST00000520752 SEC16AO15027 2179 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 IGHV5-10-1A0A0J9YXX1 117 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 K7EIM0 57 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 NDUFA1O15239 70 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 TRBV12-3P01733 135 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 TFF1P04155 84 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 RNASE4P34096 147 aaKnown RBP6.28□□□□□ -1.4
SHPRH-208ENST00000520752 SNRPD3P62318 126 aaKnown RBP6.28□□□□□ -1.4
SHPRH-208ENST00000520752 CFHR1Q03591 330 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 ADAMTSL4-AS1Q5T5F5 129 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 VMO1Q7Z5L0 202 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 MOB4Q9Y3A3 225 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 PIEZO1Q92508 2521 aa6.28□□□□□ -1.4
SHPRH-208ENST00000520752 DSCAMO60469 2012 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 A0A087WVE0 104 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 TRAV21A0A0B4J279 112 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 JMJD7-PLA2G4BH0Y9G9 81 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 DEFB103AP81534 67 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 HIST2H2BCQ6DN03 193 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 HIST2H2BDQ6DRA6 164 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 ZNRF1Q8ND25 227 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 LY6G5BQ8NDX9 201 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 KRTAP4-2Q9BYR5 136 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 PRO3102Q9H379 93 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 PHLDA3Q9Y5J5 127 aa6.27□□□□□ -1.41
SHPRH-208ENST00000520752 RANBP2P49792 3224 aaKnown RBP6.27□□□□□ -1.41
SHPRH-208ENST00000520752 DSCAML1Q8TD84 2053 aa6.26□□□□□ -1.41
SHPRH-208ENST00000520752 C5orf67F2Z3F1 127 aa6.26□□□□□ -1.41
SHPRH-208ENST00000520752 F8WEM9 126 aa6.26□□□□□ -1.41
SHPRH-208ENST00000520752 MGPP08493 103 aa6.26□□□□□ -1.41
SHPRH-208ENST00000520752 ESRGQ1W209 222 aa6.26□□□□□ -1.41
SHPRH-208ENST00000520752 IGHV3-64DA0A0J9YX35 117 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 ZNHIT1O43257 154 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 IGKV3-15P01624 115 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 S100A4P26447 101 aaKnown RBP6.25□□□□□ -1.41
SHPRH-208ENST00000520752 MAGEA5P43359 124 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 Q8N2B8 174 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 C20orf203Q8NBC4 194 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 LINC00308Q8TCZ7 52 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 GAFA1Q96PS6 74 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 UBL5Q9BZL1 73 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 KIF25-AS1Q9Y6Z4 181 aa6.25□□□□□ -1.41
SHPRH-208ENST00000520752 TRAV23DV6A0A075B6W5 121 aa6.24□□□□□ -1.41
SHPRH-208ENST00000520752 TRAV12-3A0A0B4J271 114 aa6.24□□□□□ -1.41
SHPRH-208ENST00000520752 A0A0J9YXV3 536 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms