RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 MLST8Q9BVC4 326 aa10.67□□□□□ -0.7
IGHV3-42-201ENST00000520410 FAM30AQ9NZY2 134 aa10.67□□□□□ -0.7
IGHV3-42-201ENST00000520410 HLA-DQA1P01909 254 aa10.66□□□□□ -0.7
IGHV3-42-201ENST00000520410 OR5AL1P0C617 328 aa10.66□□□□□ -0.7
IGHV3-42-201ENST00000520410 GNG4P50150 75 aa10.66□□□□□ -0.7
IGHV3-42-201ENST00000520410 RAB5CP51148 216 aa10.66□□□□□ -0.7
IGHV3-42-201ENST00000520410 OR10G8Q8NGN5 311 aa10.66□□□□□ -0.7
IGHV3-42-201ENST00000520410 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
IGHV3-42-201ENST00000520410 CLPSL2Q6UWE3 100 aa10.65□□□□□ -0.7
IGHV3-42-201ENST00000520410 FER1L6-AS1Q8NA97 138 aa10.65□□□□□ -0.7
IGHV3-42-201ENST00000520410 MED9Q9NWA0 146 aa10.65□□□□□ -0.7
IGHV3-42-201ENST00000520410 XKRY2A2RUG3 117 aa10.64□□□□□ -0.71
IGHV3-42-201ENST00000520410 RAB19A4D1S5 217 aa10.64□□□□□ -0.71
IGHV3-42-201ENST00000520410 P01737 135 aa10.64□□□□□ -0.71
IGHV3-42-201ENST00000520410 RPS20P60866 119 aaKnown RBP10.64□□□□□ -0.71
IGHV3-42-201ENST00000520410 PKIAP61925 76 aa10.64□□□□□ -0.71
IGHV3-42-201ENST00000520410 GAGE6Q13070 117 aa10.64□□□□□ -0.71
IGHV3-42-201ENST00000520410 TMEM97Q5BJF2 176 aa10.63□□□□□ -0.71
IGHV3-42-201ENST00000520410 C11orf52Q96A22 123 aa10.63□□□□□ -0.71
IGHV3-42-201ENST00000520410 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
IGHV3-42-201ENST00000520410 TRBV25-1A0A075B6N4 114 aa10.62□□□□□ -0.71
IGHV3-42-201ENST00000520410 H7C1H1 209 aa10.62□□□□□ -0.71
IGHV3-42-201ENST00000520410 PDE6DO43924 150 aa10.62□□□□□ -0.71
IGHV3-42-201ENST00000520410 C1QBP02746 253 aa10.62□□□□□ -0.71
IGHV3-42-201ENST00000520410 PLA2G1BP04054 148 aaKnown RBP10.62□□□□□ -0.71
IGHV3-42-201ENST00000520410 MEF2BQ02080 365 aaPredicted RBP10.62□□□□□ -0.71
IGHV3-42-201ENST00000520410 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
IGHV3-42-201ENST00000520410 LINC00528Q8N1L1 170 aa10.62□□□□□ -0.71
IGHV3-42-201ENST00000520410 SULT1A2P50226 295 aa10.61□□□□□ -0.71
IGHV3-42-201ENST00000520410 CACNG7P62955 275 aa10.61□□□□□ -0.71
IGHV3-42-201ENST00000520410 TRAV1-1A0A0B4J248 108 aa10.6□□□□□ -0.71
IGHV3-42-201ENST00000520410 BCL2P10415 239 aa10.6□□□□□ -0.71
IGHV3-42-201ENST00000520410 NKX2-5P52952 324 aaPredicted RBP10.6□□□□□ -0.71
IGHV3-42-201ENST00000520410 SUMO4Q6EEV6 95 aa10.6□□□□□ -0.71
IGHV3-42-201ENST00000520410 ATRAIDQ6UW56 229 aa10.6□□□□□ -0.71
IGHV3-42-201ENST00000520410 ENHOQ6UWT2 76 aa10.6□□□□□ -0.71
IGHV3-42-201ENST00000520410 BIN3Q9NQY0 253 aa10.6□□□□□ -0.71
IGHV3-42-201ENST00000520410 IGHV1-24A0A0C4DH33 117 aa10.59□□□□□ -0.71
IGHV3-42-201ENST00000520410 TRGC1P0CF51 173 aa10.59□□□□□ -0.71
IGHV3-42-201ENST00000520410 SLC51BQ86UW2 128 aa10.59□□□□□ -0.71
IGHV3-42-201ENST00000520410 DEFB104AQ8WTQ1 72 aa10.59□□□□□ -0.71
IGHV3-42-201ENST00000520410 J3QL48 77 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 IGLV2-8P01709 118 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 IGLC6P0CF74 106 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 MIAQ16674 131 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 LYZL1Q6UWQ5 148 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 SCXQ7RTU7 201 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 LINC00269Q8N2A0 174 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 SMIM12Q96EX1 92 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 VAX2Q9UIW0 290 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 KIF25-AS1Q9Y6Z4 181 aa10.58□□□□□ -0.72
IGHV3-42-201ENST00000520410 hCG_2014768A0A024R1R8 64 aa10.57□□□□□ -0.72
IGHV3-42-201ENST00000520410 C19orf71A6NCJ1 209 aa10.57□□□□□ -0.72
IGHV3-42-201ENST00000520410 USP17L23D6RBM5 183 aa10.57□□□□□ -0.72
IGHV3-42-201ENST00000520410 F2Z2F3 143 aa10.57□□□□□ -0.72
IGHV3-42-201ENST00000520410 UBE2L6O14933 153 aa10.57□□□□□ -0.72
IGHV3-42-201ENST00000520410 RBX1P62877 108 aa10.57□□□□□ -0.72
IGHV3-42-201ENST00000520410 TCTE3Q8IZS6 198 aa10.57□□□□□ -0.72
IGHV3-42-201ENST00000520410 DPH3P1Q9H4G8 78 aa10.57□□□□□ -0.72
IGHV3-42-201ENST00000520410 IGLV10-54A0A075B6I4 117 aa10.56□□□□□ -0.72
IGHV3-42-201ENST00000520410 CEBPGP53567 150 aa10.56□□□□□ -0.72
IGHV3-42-201ENST00000520410 TWIST1Q15672 202 aa10.56□□□□□ -0.72
IGHV3-42-201ENST00000520410 RASL11AQ6T310 242 aa10.56□□□□□ -0.72
IGHV3-42-201ENST00000520410 Q6ZSA8 131 aa10.56□□□□□ -0.72
IGHV3-42-201ENST00000520410 M0QY20 66 aa10.55□□□□□ -0.72
IGHV3-42-201ENST00000520410 NTF3P20783 257 aa10.55□□□□□ -0.72
IGHV3-42-201ENST00000520410 TMEM243Q9BU79 118 aa10.55□□□□□ -0.72
IGHV3-42-201ENST00000520410 TRBV20OR9-2A0A075B6H5 130 aa10.54□□□□□ -0.72
IGHV3-42-201ENST00000520410 TAGLN2P37802 199 aaKnown RBP10.54□□□□□ -0.72
IGHV3-42-201ENST00000520410 NUDT10Q8NFP7 164 aa10.54□□□□□ -0.72
IGHV3-42-201ENST00000520410 NUDT11Q96G61 164 aa10.54□□□□□ -0.72
IGHV3-42-201ENST00000520410 RNASE7Q9H1E1 156 aaKnown RBP10.54□□□□□ -0.72
IGHV3-42-201ENST00000520410 RPP21Q9H633 154 aaKnown RBP10.54□□□□□ -0.72
IGHV3-42-201ENST00000520410 AMTP48728 403 aa10.53□□□□□ -0.72
IGHV3-42-201ENST00000520410 REG3AQ06141 175 aa10.53□□□□□ -0.72
IGHV3-42-201ENST00000520410 IQCJQ1A5X6 159 aa10.53□□□□□ -0.72
IGHV3-42-201ENST00000520410 SMIM15Q7Z3B0 74 aa10.53□□□□□ -0.72
IGHV3-42-201ENST00000520410 AKAP14Q86UN6 197 aa10.53□□□□□ -0.72
IGHV3-42-201ENST00000520410 CHAC1Q9BUX1 264 aa10.53□□□□□ -0.72
IGHV3-42-201ENST00000520410 COTL1Q14019 142 aa10.52□□□□□ -0.73
IGHV3-42-201ENST00000520410 ALKAL2Q6UX46 152 aa10.52□□□□□ -0.73
IGHV3-42-201ENST00000520410 NIT2Q9NQR4 276 aa10.52□□□□□ -0.73
IGHV3-42-201ENST00000520410 IGKV3OR2-268A0A0C4DH90 116 aa10.51□□□□□ -0.73
IGHV3-42-201ENST00000520410 WDR73Q6P4I2 378 aa10.51□□□□□ -0.73
IGHV3-42-201ENST00000520410 CIRBP-AS1Q8TBR5 109 aa10.51□□□□□ -0.73
IGHV3-42-201ENST00000520410 TRAV26-2A0A0B4J265 109 aa10.5□□□□□ -0.73
IGHV3-42-201ENST00000520410 PRSS1P07477 247 aa10.5□□□□□ -0.73
IGHV3-42-201ENST00000520410 CTRLP40313 264 aa10.5□□□□□ -0.73
IGHV3-42-201ENST00000520410 hDV102S1A0JD36 115 aa10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 K7EN84 100 aa10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 GATCO43716 136 aaKnown RBP10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 BLOC1S1P78537 153 aa10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 AMMECR1LQ6DCA0 310 aa10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 C9orf62Q8N4C0 152 aa10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 OCC1Q8TAD7 63 aa10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 BORCS7Q96B45 105 aa10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 PRR34Q9NV39 138 aa10.49□□□□□ -0.73
IGHV3-42-201ENST00000520410 FAT1Q14517 4588 aa10.48□□□□□ -0.73
IGHV3-42-201ENST00000520410 IGLV4-60A0A075B6I1 120 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms