RNA–Protein interactions for RNA: ENST00000520158.5

CTNNA1-219, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 719 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-219ENST00000520158 KLF12Q9Y4X4 402 aa4.08□□□□□ -1.76
CTNNA1-219ENST00000520158 TRBV20-1A0A075B6N2 111 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 TRAV10A0A0B4J240 114 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 IGHV4-28A0A0C4DH34 117 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 IGHV3-66A0A0C4DH42 116 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 FAM236AA0A1B0GUQ0 79 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 FAM236BA0A1B0GV22 79 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 CRYM-AS1A6NIL9 109 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 H3BMM0 161 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 J3QQQ9 107 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 BUB3O43684 328 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 NUPR1O60356 82 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 DPM2O94777 84 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 DUSP14O95147 198 aaKnown RBP4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 NDUFB4O95168 129 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 MT-ND6P03923 174 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 RPL11P62913 178 aaKnown RBP4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 SP6Q3SY56 376 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 SPINK9Q5DT21 86 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 SLC25A34Q6PIV7 304 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 TMEM14EPQ6UXP3 125 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 SPATA12Q7Z6I5 190 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 C3orf22Q8N5N4 141 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 LINC00526Q96FQ7 95 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 DPH3Q96FX2 82 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 SCGB3A2Q96PL1 93 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 NAA60Q9H7X0 242 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 MANBALQ9NQG1 85 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 Q9UF83 564 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 RABAC1Q9UI14 185 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 PYGO1Q9Y3Y4 419 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 HERC2O95714 4834 aa4.07□□□□□ -1.76
CTNNA1-219ENST00000520158 A0A1B0GV50 99 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 IGLL5B9A064 214 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 DEFB4AO15263 64 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 PITX3O75364 302 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 NXPH3O95157 252 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 ZNF688P0C7X2 276 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 GATA2P23769 480 aaPredicted RBP4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 HLA-DMBP28068 263 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 FAUP35544 74 aaKnown RBP4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 FOXA3P55318 350 aaPredicted RBP4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 KRTDAPP60985 99 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 WFDC2Q14508 124 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 C12orf74Q32Q52 190 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 C10orf126Q8N4M7 172 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 CYB561D1Q8N8Q1 229 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 PRELID3AQ96N28 172 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 AQP10Q96PS8 301 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 NRN1Q9NPD7 142 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 PXMP4Q9Y6I8 212 aa4.06□□□□□ -1.76
CTNNA1-219ENST00000520158 KIAA1109Q2LD37 5005 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 DNAH17Q9UFH2 4485 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 IGHV4-4A0A075B6R2 117 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 PIGBOS1A0A0B4J2F0 54 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 KNCNA6PVL3 124 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 A8MTW9 85 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 H3BMG7 143 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 SYS1-DBNDD2H3BUS1 97 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 UQCRQO14949 82 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 NCR2O95944 276 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 HLA-DRB4P13762 266 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 PFN2P35080 140 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 ASIPP42127 132 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 GALR1P47211 349 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 SNRPD3P62318 126 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 CYCSP99999 105 aaKnown RBP4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 ZNF90Q03938 601 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 LGALS9BQ3B8N2 356 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 ZNF506Q5JVG8 444 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 C9orf153Q5TBE3 101 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 LYRM7Q5U5X0 104 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 Q6ZTC4 211 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 POM121L12Q8N7R1 296 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 PPP1R1CQ8WVI7 109 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 CACNG5Q9UF02 275 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 HLA-DRB4X5D2U9 266 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 PCLOQ9Y6V0 5065 aa4.05□□□□□ -1.76
CTNNA1-219ENST00000520158 HECTD4Q9Y4D8 3996 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 IGKV1D-37A0A075B6S9 117 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 DEFB131BA0A096LNP1 70 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 M0R2P5 195 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 SOCS3O14543 225 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 SNCGO76070 127 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 IL4P05112 153 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 P0DMU3 169 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 FAM231AP0DMU4 169 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 FAM231CP0DMU5 169 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 BCL2P10415 239 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 PSMB3P49720 205 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 TMEM258P61165 79 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 SUPT4H1P63272 117 aaKnown RBP4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 RRN3P1Q2M238 152 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 ETDBQ3ZM63 59 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 PSMG4Q5JS54 123 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 GAGE2AQ6NT46 116 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 SH2D6Q7Z4S9 175 aa4.04□□□□□ -1.76
CTNNA1-219ENST00000520158 LRTM2Q8N967 370 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms