RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MORN3Q6PF18 240 aaPredicted RBP3.76□□□□□ -1.81
SDC2-204ENST00000519914 TM2D2Q9BX73 214 aa3.76□□□□□ -1.81
SDC2-204ENST00000519914 VPREB3Q9UKI3 123 aa3.76□□□□□ -1.81
SDC2-204ENST00000519914 VPS13CQ709C8 3753 aa3.76□□□□□ -1.81
SDC2-204ENST00000519914 KMT2BQ9UMN6 2715 aaPredicted RBP3.75□□□□□ -1.81
SDC2-204ENST00000519914 TRBV20-1A0A075B6N2 111 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 IGHV3OR16-10A0A075B7F0 116 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 TRAV2A0A0B4J234 112 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 F8VRH5 84 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 H7C1H1 209 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 SNCGO76070 127 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 ELANEP08246 267 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 PLNP26678 52 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 POLR2KP53803 58 aaKnown RBP3.75□□□□□ -1.81
SDC2-204ENST00000519914 NDUFV3P56181 108 aaKnown RBP3.75□□□□□ -1.81
SDC2-204ENST00000519914 FXYD7P58549 80 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 BLCAPP62952 87 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 LY6EQ16553 131 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 Q6ZQT7 251 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 PCP2Q8IVA1 136 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 NEXN-AS1Q8NBZ9 246 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 RAB37Q96AX2 223 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 C9orf85Q96MD7 179 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 FOXC2Q99958 501 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 EDA2RQ9HAV5 297 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 LINC00527Q9UJ94 153 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 ZNF256Q9Y2P7 627 aaPredicted RBP3.75□□□□□ -1.81
SDC2-204ENST00000519914 CSDC2Q9Y534 153 aaKnown RBP3.75□□□□□ -1.81
SDC2-204ENST00000519914 DOPEY1Q5JWR5 2465 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 CR1P17927 2039 aa3.75□□□□□ -1.81
SDC2-204ENST00000519914 SPTAN1Q13813 2472 aaKnown RBP3.75□□□□□ -1.81
SDC2-204ENST00000519914 SPTBN4Q9H254 2564 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 IGKV2D-26A0A0A0MRZ7 120 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 A0A0J9YX75 114 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 A0A1B0GWB2 263 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 SMIM9A6NGZ8 99 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 K7EQG2 157 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 IGHV3-11P01762 117 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 PRSS1P07477 247 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 LGALS1P09382 135 aaKnown RBP3.74□□□□□ -1.81
SDC2-204ENST00000519914 S100A4P26447 101 aaKnown RBP3.74□□□□□ -1.81
SDC2-204ENST00000519914 PIK3CD-AS1Q5SR53 167 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 Q8N2B8 174 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 PHLDA1Q8WV24 401 aaPredicted RBP3.74□□□□□ -1.81
SDC2-204ENST00000519914 DUX5Q96PT3 197 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 MRPL35Q9NZE8 188 aaKnown RBP3.74□□□□□ -1.81
SDC2-204ENST00000519914 PHLDA3Q9Y5J5 127 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 TIMM8BQ9Y5J9 83 aaPredicted RBP3.74□□□□□ -1.81
SDC2-204ENST00000519914 TACC2O95359 2948 aa3.74□□□□□ -1.81
SDC2-204ENST00000519914 SVEP1Q4LDE5 3571 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 TRBV25-1A0A075B6N4 114 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 TRAV26-2A0A0B4J265 109 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 IGHV3-16A0A0C4DH30 117 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 TRBV27A0A0K0K1C4 114 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 DUSP14O95147 198 aaKnown RBP3.73□□□□□ -1.81
SDC2-204ENST00000519914 ZNF688P0C7X2 276 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 RNASE4P34096 147 aaKnown RBP3.73□□□□□ -1.81
SDC2-204ENST00000519914 NMUP48645 174 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 DEFB112Q30KQ8 113 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 ETDBQ3ZM63 59 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 PAPPA-AS1Q5QFB9 102 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 ZC2HC1BQ5TFG8 222 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 ZNRF2Q8NHG8 242 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 BAALCQ8WXS3 180 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 DLX4Q92988 240 aaPredicted RBP3.73□□□□□ -1.81
SDC2-204ENST00000519914 TMEM141Q96I45 108 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 UBE2E2Q96LR5 201 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 C18orf15Q96N68 181 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 TIMM17AQ99595 171 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 CHAC1Q9BUX1 264 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 IMUPQ9GZP8 106 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 ZNF702PQ9H963 129 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 CHD6Q8TD26 2715 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 AKAP9Q99996 3911 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 AGRNO00468 2067 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 CSPG4Q6UVK1 2322 aa3.73□□□□□ -1.81
SDC2-204ENST00000519914 ANK3Q12955 4377 aaKnown RBP3.72□□□□□ -1.81
SDC2-204ENST00000519914 TRBV7-3A0A075B6L6 115 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 IGIPA6NJ69 53 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 F6UB75 175 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 VCYO14598 125 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 GNRH2O43555 120 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 IGHV4-59P01825 116 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 CRYGDP07320 174 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 COX6B1P14854 86 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 FXYD2P54710 66 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 SNRPD3P62318 126 aaKnown RBP3.72□□□□□ -1.81
SDC2-204ENST00000519914 WFDC2Q14508 124 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 RHOHQ15669 191 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 NSUN5P1Q3KNT7 163 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 MEIG1Q5JSS6 88 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 FAM159AQ6UWV7 190 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 AMTNQ6UX39 209 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 C2orf66Q6UXQ4 117 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 GTSCR1Q86UQ5 136 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 TEN1Q86WV5 123 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 CEND1Q8N111 149 aa3.72□□□□□ -1.81
SDC2-204ENST00000519914 C14orf178Q8N769 122 aaPredicted RBP3.72□□□□□ -1.81
SDC2-204ENST00000519914 RPL39LQ96EH5 51 aaKnown RBP3.72□□□□□ -1.81
SDC2-204ENST00000519914 SCGB3A1Q96QR1 104 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms