RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 TRBV20OR9-2A0A075B6H5 130 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 TRAV21A0A0B4J279 112 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 LTAP01374 205 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 PFN1P07737 140 aaKnown RBP5.74□□□□□ -1.49
TRIM35-202ENST00000519219 ZNF876PQ49A33 203 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 OR10G8Q8NGN5 311 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 ATP6V0E2Q8NHE4 81 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 GTSF1LQ9H1H1 148 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 ZFP30Q9Y2G7 519 aa5.74□□□□□ -1.49
TRIM35-202ENST00000519219 TRBV6-1A0A0K0K1D8 114 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 TRBV6-4A0A1B0GX49 114 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 GAGE12JA6NER3 117 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 K7EN84 100 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 LINC00694P0DN24 101 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 RNASE3P12724 160 aaKnown RBP5.73□□□□□ -1.49
TRIM35-202ENST00000519219 GAGE1Q13065 139 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 GAGE4Q13068 117 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 GAGE5Q13069 117 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 RHOHQ15669 191 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 GAGE13Q4V321 117 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 SAPCD1Q5SSQ6 148 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 DEFB104AQ8WTQ1 72 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 PRADC1Q9BSG0 188 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 JPT2Q9H910 190 aa5.73□□□□□ -1.49
TRIM35-202ENST00000519219 GATCO43716 136 aaKnown RBP5.72□□□□□ -1.49
TRIM35-202ENST00000519219 GCGP01275 180 aa5.72□□□□□ -1.49
TRIM35-202ENST00000519219 P01737 135 aa5.72□□□□□ -1.49
TRIM35-202ENST00000519219 RPL19P84098 196 aaKnown RBP5.72□□□□□ -1.49
TRIM35-202ENST00000519219 LAGE3Q14657 143 aa5.72□□□□□ -1.49
TRIM35-202ENST00000519219 SAMD10Q9BYL1 202 aa5.72□□□□□ -1.49
TRIM35-202ENST00000519219 RNASE7Q9H1E1 156 aaKnown RBP5.72□□□□□ -1.49
TRIM35-202ENST00000519219 TMEM242Q9NWH2 141 aa5.72□□□□□ -1.49
TRIM35-202ENST00000519219 URGCP-MRPS24S4R325 110 aa5.72□□□□□ -1.49
TRIM35-202ENST00000519219 IGLV2-11P01706 119 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 IGLV2-8P01709 118 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 HNRNPA3P51991 378 aaKnown RBP5.71□□□□□ -1.5
TRIM35-202ENST00000519219 SMUG1Q53HV7 270 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 FAM162BQ5T6X4 162 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 C14orf178Q8N769 122 aaPredicted RBP5.71□□□□□ -1.5
TRIM35-202ENST00000519219 CIRBP-AS1Q8TBR5 109 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 BTF3L4Q96K17 158 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 KCNS1Q96KK3 526 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 TM2D2Q9BX73 214 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 RPP21Q9H633 154 aaKnown RBP5.71□□□□□ -1.5
TRIM35-202ENST00000519219 OSTCQ9NRP0 149 aa5.71□□□□□ -1.5
TRIM35-202ENST00000519219 XKRY2A2RUG3 117 aa5.7□□□□□ -1.5
TRIM35-202ENST00000519219 UFSP1Q6NVU6 142 aa5.7□□□□□ -1.5
TRIM35-202ENST00000519219 FAM231DQ6ZW35 169 aa5.7□□□□□ -1.5
TRIM35-202ENST00000519219 OR2D3Q8NGH3 330 aa5.7□□□□□ -1.5
TRIM35-202ENST00000519219 ZC2HC1AQ96GY0 325 aa5.7□□□□□ -1.5
TRIM35-202ENST00000519219 CHAC1Q9BUX1 264 aa5.7□□□□□ -1.5
TRIM35-202ENST00000519219 IL36BQ9NZH7 164 aa5.7□□□□□ -1.5
TRIM35-202ENST00000519219 TRAV8-3A0A0A6YYJ7 113 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 IGKV3D-20A0A0C4DH25 116 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 SH2D1AO60880 128 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 SERTAD4-AS1Q5TG53 156 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 NUDT10Q8NFP7 164 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 PTH2Q96A98 100 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 BORCS7Q96B45 105 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 NUDT11Q96G61 164 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 IMMP2LQ96T52 175 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 MLST8Q9BVC4 326 aa5.69□□□□□ -1.5
TRIM35-202ENST00000519219 TMA7Q9Y2S6 64 aaKnown RBP5.69□□□□□ -1.5
TRIM35-202ENST00000519219 IGKV2D-24A0A075B6R9 120 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 TGIF2-C20orf24A0A0A6YYL0 155 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 A8MWL6 223 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 RPS20P60866 119 aaKnown RBP5.68□□□□□ -1.5
TRIM35-202ENST00000519219 ELOBQ15370 118 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 CT83Q5H943 113 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 SYT8Q8NBV8 401 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 TPPP3Q9BW30 176 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 NAT8BQ9UHF3 227 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 KLK12Q9UKR0 248 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 PLA2G2DQ9UNK4 145 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 V9GYV3 84 aa5.68□□□□□ -1.5
TRIM35-202ENST00000519219 TRAV9-1A0A075B6T8 112 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 TMSB15BA0A087X1C1 80 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 C19orf71A6NCJ1 209 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 FABP5P3A8MUU1 101 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 CIDEAO60543 219 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 OXTP01178 125 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 RAB5AP20339 215 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 RPS10P46783 165 aaKnown RBP5.67□□□□□ -1.5
TRIM35-202ENST00000519219 DMRTA1Q5VZB9 504 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 NIT1Q86X76 327 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 TSKUQ8WUA8 353 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 UBE2WQ96B02 151 aa5.67□□□□□ -1.5
TRIM35-202ENST00000519219 TRBV24-1A0A075B6N3 115 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 A0A087WWL8 130 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 COLCA2A8K830 154 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 H3BVH4 76 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 PANO1I0J062 215 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 CXCL1P09341 107 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 RAB4BP61018 213 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 ZFP2Q6ZN57 461 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 Q8N976 141 aa5.66□□□□□ -1.5
TRIM35-202ENST00000519219 SMIM27A0A1W2PRY6 76 aa5.65□□□□□ -1.5
TRIM35-202ENST00000519219 GRIFINA4D1Z8 144 aa5.65□□□□□ -1.5
TRIM35-202ENST00000519219 HIGD1CA8MV81 97 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms