RNA–Protein interactions for RNA: ENST00000518585.1

CTNNA1-209, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-209ENST00000518585 MRPL20Q9BYC9 149 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 AGPAT4-IT1Q9H0P7 198 aa3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 RPP21Q9H633 154 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 LINC00574Q9H8X3 128 aa3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 ZNF355PQ9NSJ1 428 aa3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 RPUSD1Q9UJJ7 312 aaKnown RBP3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 HHLA3Q9XRX5 114 aa3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 ZNF256Q9Y2P7 627 aaPredicted RBP3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 PYGO1Q9Y3Y4 419 aa3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 U3KQK5 164 aa3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 HIVEP2P31629 2446 aa3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 CSPG4Q6UVK1 2322 aa3.15□□□□□ -1.91
CTNNA1-209ENST00000518585 TRAV13-1A0A0B4J241 112 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 LOC107984156A0A0G2JMH3 177 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 LINC01546A6NGU7 62 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 C17orf98A8MV24 154 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 A8MZ25 164 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 H3BVH4 76 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 J3QQQ9 107 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 ATOX1O00244 68 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 TCL1BO95988 128 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 P0C879 139 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 SAA2P0DJI9 122 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 IGHV1-8P0DP01 117 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 COX7A1P24310 79 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 DUTP33316 252 aaKnown RBP3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 PFN2P35080 140 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 ZNF816Q0VGE8 651 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 EIF4EBP1Q13541 118 aaPredicted RBP3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 RPL39P5Q59GN2 51 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 ZFP2Q6ZN57 461 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 VMO1Q7Z5L0 202 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 ARL17AQ8IVW1 177 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 C3orf56Q8N813 242 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 LY6G5BQ8NDX9 201 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 AAMDCQ9H7C9 122 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 PLEKHA3Q9HB20 300 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 JMJD1CQ15652 2540 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 TLN2Q9Y4G6 2542 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 OBSCNQ5VST9 7968 aa3.14□□□□□ -1.91
CTNNA1-209ENST00000518585 COL6A5A8TX70 2615 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 NSD1Q96L73 2696 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 IGHV3OR16-10A0A075B7F0 116 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 A0A096LNJ9 63 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 IGKV2D-26A0A0A0MRZ7 120 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 WI2-2373I1.2A0A1W2PRP0 233 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 C19orf71A6NCJ1 209 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 LINC01549A6NIU2 74 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 NCBP2LA6PVI3 153 aaKnown RBP3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 SRRM4A7MD48 611 aaKnown RBP3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 EPM2AB3EWF7 344 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 LY6LH3BQJ8 138 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 M0R1W7 72 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 P0DMU3 169 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 FAM231AP0DMU4 169 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 FAM231CP0DMU5 169 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 PYYP10082 97 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 FCER1GP30273 86 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 ZNF138P52744 262 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 DLX1P56177 255 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 PRB3Q04118 309 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 PAX8Q06710 450 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 ZNF56Q15929 161 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 LINC00643Q86TS7 51 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 LINC00311Q8N616 119 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 MPLKIPQ8TAP9 179 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 C2orf48Q96LS8 159 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 S1PR3Q99500 378 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 ZNRD1Q9P1U0 126 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 PKIGQ9Y2B9 76 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 AMMECR1Q9Y4X0 333 aaPredicted RBP3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 LSM4Q9Y4Z0 139 aaKnown RBP3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 ATRQ13535 2644 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 CUBNO60494 3623 aa3.13□□□□□ -1.91
CTNNA1-209ENST00000518585 TRAV12-2A0A075B6T6 113 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 TRAV40A0A0B4J280 105 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 TRBV10-2A0A0K0K1G8 114 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 A0A1B0GUT8 65 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 TMEM89A2RUT3 159 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 H3BMM0 161 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 H7C1H1 209 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 PEX7O00628 323 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 FCGR3BO75015 233 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 P01737 135 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 IGHV4-38-2P0DP08 117 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 PLNP26678 52 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 UBE2E1P51965 193 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 ZNF137PP52743 207 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 TIRAPP58753 221 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 ERVK-16P61578 105 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 UBE2L3P68036 154 aaKnown RBP3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 ATXN8Q156A1 80 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 IZUMO4Q1ZYL8 232 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 ZC2HC1BQ5TFG8 222 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 MIC13Q5XKP0 118 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 ZNF833PQ6ZTB9 187 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 C5orf38Q86SI9 138 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 NDUFA11Q86Y39 141 aa3.12□□□□□ -1.91
CTNNA1-209ENST00000518585 EXOC3-AS1Q8N2X6 119 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms