RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 LINC01556Q5JQF7 62 aa14.94□□□□□ -0.02
VEGFA-217ENST00000518538 SUMO4Q6EEV6 95 aa14.94□□□□□ -0.02
VEGFA-217ENST00000518538 SMIM15Q7Z3B0 74 aa14.93□□□□□ -0.02
VEGFA-217ENST00000518538 A0A1B0GUT8 65 aa14.92□□□□□ -0.02
VEGFA-217ENST00000518538 C10orf126Q8N4M7 172 aa14.92□□□□□ -0.02
VEGFA-217ENST00000518538 DNAH10Q8IVF4 4471 aa14.92□□□□□ -0.02
VEGFA-217ENST00000518538 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.91□□□□□ -0.02
VEGFA-217ENST00000518538 DNAJC30Q96LL9 226 aa14.91□□□□□ -0.02
VEGFA-217ENST00000518538 RASL11AQ6T310 242 aa14.9□□□□□ -0.02
VEGFA-217ENST00000518538 NAT8BQ9UHF3 227 aa14.9□□□□□ -0.02
VEGFA-217ENST00000518538 TNFRSF18Q9Y5U5 241 aa14.9□□□□□ -0.02
VEGFA-217ENST00000518538 UQCC3Q6UW78 93 aa14.89□□□□□ -0.03
VEGFA-217ENST00000518538 DAZ4Q86SG3 579 aaKnown RBP14.89□□□□□ -0.03
VEGFA-217ENST00000518538 NUP35Q8NFH5 326 aa14.89□□□□□ -0.03
VEGFA-217ENST00000518538 DAZ3Q9NR90 486 aaKnown RBP14.89□□□□□ -0.03
VEGFA-217ENST00000518538 DNAH2Q9P225 4427 aa14.88□□□□□ -0.03
VEGFA-217ENST00000518538 SMIM27A0A1W2PRY6 76 aa14.88□□□□□ -0.03
VEGFA-217ENST00000518538 PNRC1Q12796 327 aaPredicted RBP14.88□□□□□ -0.03
VEGFA-217ENST00000518538 A0A1B0GVY2 172 aa14.87□□□□□ -0.03
VEGFA-217ENST00000518538 IGHV3-30P01768 117 aa14.87□□□□□ -0.03
VEGFA-217ENST00000518538 IGHV3-33P01772 117 aa14.87□□□□□ -0.03
VEGFA-217ENST00000518538 IGHV3-30-3P0DP02 117 aa14.87□□□□□ -0.03
VEGFA-217ENST00000518538 IGHV3-30-5P0DP03 117 aa14.87□□□□□ -0.03
VEGFA-217ENST00000518538 NIT2Q9NQR4 276 aa14.87□□□□□ -0.03
VEGFA-217ENST00000518538 EPPK1P58107 5090 aaKnown RBP14.87□□□□□ -0.03
VEGFA-217ENST00000518538 TRBV6-8A0A0A6YYG3 113 aa14.86□□□□□ -0.03
VEGFA-217ENST00000518538 TNP2Q05952 138 aa14.86□□□□□ -0.03
VEGFA-217ENST00000518538 RIGQ13278 110 aa14.86□□□□□ -0.03
VEGFA-217ENST00000518538 TMEM97Q5BJF2 176 aa14.86□□□□□ -0.03
VEGFA-217ENST00000518538 Q6ZRN7 208 aaPredicted RBP14.86□□□□□ -0.03
VEGFA-217ENST00000518538 NFE4Q86UQ8 179 aa14.86□□□□□ -0.03
VEGFA-217ENST00000518538 GATD1Q8NB37 220 aa14.86□□□□□ -0.03
VEGFA-217ENST00000518538 FRZBQ92765 325 aa14.86□□□□□ -0.03
VEGFA-217ENST00000518538 FRAS1Q86XX4 4008 aa14.85□□□□□ -0.03
VEGFA-217ENST00000518538 TMEM191AQ9H0A3 160 aa14.85□□□□□ -0.03
VEGFA-217ENST00000518538 TRAV26-2A0A0B4J265 109 aa14.84□□□□□ -0.03
VEGFA-217ENST00000518538 IBA57-AS1B1ANH7 110 aa14.84□□□□□ -0.03
VEGFA-217ENST00000518538 NIT1Q86X76 327 aa14.84□□□□□ -0.03
VEGFA-217ENST00000518538 PPP1R2P9O14990 202 aa14.83□□□□□ -0.04
VEGFA-217ENST00000518538 Q8N3U1 123 aa14.83□□□□□ -0.04
VEGFA-217ENST00000518538 NTM-AS1Q6ZSK4 140 aa14.82□□□□□ -0.04
VEGFA-217ENST00000518538 URGCP-MRPS24S4R325 110 aa14.82□□□□□ -0.04
VEGFA-217ENST00000518538 TMEM218A2RU14 115 aa14.81□□□□□ -0.04
VEGFA-217ENST00000518538 LAGE3Q14657 143 aa14.81□□□□□ -0.04
VEGFA-217ENST00000518538 COMMD7Q86VX2 200 aa14.81□□□□□ -0.04
VEGFA-217ENST00000518538 CHCHD7Q9BUK0 85 aa14.81□□□□□ -0.04
VEGFA-217ENST00000518538 KCNIP4Q6PIL6 250 aa14.8□□□□□ -0.04
VEGFA-217ENST00000518538 RNF185Q96GF1 192 aa14.8□□□□□ -0.04
VEGFA-217ENST00000518538 A0A1B0GW15 77 aa14.79□□□□□ -0.04
VEGFA-217ENST00000518538 MT-ND4LP03901 98 aa14.79□□□□□ -0.04
VEGFA-217ENST00000518538 ADCYAP1P18509 176 aa14.79□□□□□ -0.04
VEGFA-217ENST00000518538 AMN1Q8IY45 258 aa14.79□□□□□ -0.04
VEGFA-217ENST00000518538 ANAPC16Q96DE5 110 aa14.79□□□□□ -0.04
VEGFA-217ENST00000518538 RPL39LQ96EH5 51 aaKnown RBP14.79□□□□□ -0.04
VEGFA-217ENST00000518538 FAT2Q9NYQ8 4349 aa14.79□□□□□ -0.04
VEGFA-217ENST00000518538 DNAH17Q9UFH2 4485 aa14.79□□□□□ -0.04
VEGFA-217ENST00000518538 TRBV25-1A0A075B6N4 114 aa14.78□□□□□ -0.04
VEGFA-217ENST00000518538 A0A087WX48 190 aa14.78□□□□□ -0.04
VEGFA-217ENST00000518538 LINC00862A6NCI5 91 aa14.78□□□□□ -0.04
VEGFA-217ENST00000518538 RAB4AP20338 218 aa14.78□□□□□ -0.04
VEGFA-217ENST00000518538 IQCJQ1A5X6 159 aa14.78□□□□□ -0.04
VEGFA-217ENST00000518538 MRAP2Q96G30 205 aa14.78□□□□□ -0.04
VEGFA-217ENST00000518538 CHCHD5Q9BSY4 110 aa14.78□□□□□ -0.04
VEGFA-217ENST00000518538 IGHV1-24A0A0C4DH33 117 aa14.77□□□□□ -0.05
VEGFA-217ENST00000518538 F8W036 122 aa14.77□□□□□ -0.05
VEGFA-217ENST00000518538 PKIAP61925 76 aa14.77□□□□□ -0.05
VEGFA-217ENST00000518538 TMEM262E9PQX1 116 aa14.76□□□□□ -0.05
VEGFA-217ENST00000518538 Q9HAA7 133 aa14.76□□□□□ -0.05
VEGFA-217ENST00000518538 TRBV6-5A0A0K0K1A5 114 aa14.75□□□□□ -0.05
VEGFA-217ENST00000518538 CAMPP49913 170 aa14.75□□□□□ -0.05
VEGFA-217ENST00000518538 HBBP68871 147 aa14.75□□□□□ -0.05
VEGFA-217ENST00000518538 COTL1Q14019 142 aa14.75□□□□□ -0.05
VEGFA-217ENST00000518538 ELOBQ15370 118 aa14.75□□□□□ -0.05
VEGFA-217ENST00000518538 SEC11CQ9BY50 192 aa14.75□□□□□ -0.05
VEGFA-217ENST00000518538 TRAV8-3A0A0A6YYJ7 113 aa14.74□□□□□ -0.05
VEGFA-217ENST00000518538 A0A1B0GXF2 115 aa14.74□□□□□ -0.05
VEGFA-217ENST00000518538 S100A8P05109 93 aa14.74□□□□□ -0.05
VEGFA-217ENST00000518538 MRPL54Q6P161 138 aaKnown RBP14.74□□□□□ -0.05
VEGFA-217ENST00000518538 KLK12Q9UKR0 248 aa14.74□□□□□ -0.05
VEGFA-217ENST00000518538 SDHAF1A6NFY7 115 aa14.73□□□□□ -0.05
VEGFA-217ENST00000518538 GAS8-AS1O95177 125 aa14.73□□□□□ -0.05
VEGFA-217ENST00000518538 MPV17L2Q567V2 206 aa14.73□□□□□ -0.05
VEGFA-217ENST00000518538 FAM104BQ5XKR9 115 aa14.73□□□□□ -0.05
VEGFA-217ENST00000518538 ATP5L2Q7Z4Y8 100 aa14.73□□□□□ -0.05
VEGFA-217ENST00000518538 TMEM243Q9BU79 118 aa14.73□□□□□ -0.05
VEGFA-217ENST00000518538 BIRC6Q9NR09 4857 aa14.71□□□□□ -0.05
VEGFA-217ENST00000518538 RPS10P46783 165 aaKnown RBP14.71□□□□□ -0.05
VEGFA-217ENST00000518538 AMTP48728 403 aa14.71□□□□□ -0.05
VEGFA-217ENST00000518538 GAGE6Q13070 117 aa14.71□□□□□ -0.05
VEGFA-217ENST00000518538 ATRAIDQ6UW56 229 aa14.71□□□□□ -0.05
VEGFA-217ENST00000518538 DEFB104AQ8WTQ1 72 aa14.71□□□□□ -0.05
VEGFA-217ENST00000518538 ST20Q9HBF5 79 aa14.71□□□□□ -0.05
VEGFA-217ENST00000518538 HECTD4Q9Y4D8 3996 aa14.71□□□□□ -0.05
VEGFA-217ENST00000518538 PSCAO43653 123 aa14.7□□□□□ -0.06
VEGFA-217ENST00000518538 NCR2O95944 276 aa14.7□□□□□ -0.06
VEGFA-217ENST00000518538 PPP1R17O96001 155 aa14.7□□□□□ -0.06
VEGFA-217ENST00000518538 MRPL51Q4U2R6 128 aaKnown RBP14.7□□□□□ -0.06
VEGFA-217ENST00000518538 TM2D2Q9BX73 214 aa14.7□□□□□ -0.06
VEGFA-217ENST00000518538 SMKR1H3BMG3 65 aa14.69□□□□□ -0.06
VEGFA-217ENST00000518538 RBX1P62877 108 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms