RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 WFDC2Q14508 124 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 C10orf128Q5T292 105 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 FAM27BQ5VT28 67 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 RPL7L1Q6DKI1 246 aaKnown RBP3.86□□□□□ -1.79
PVT1-205ENST00000517790 ZNF826PQ6ZT77 177 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 DYNAPQ8N1N2 210 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 FAM216BQ8N7L0 139 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 C2orf50Q96LR7 162 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 SPACA5Q96QH8 159 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 CCL13Q99616 98 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 SHANK2-AS3Q9BTD1 123 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 SCRT2Q9NQ03 307 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 OTORQ9NRC9 128 aa3.86□□□□□ -1.79
PVT1-205ENST00000517790 TNCP24821 2201 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 IGHV7-81A0A0B4J1V7 117 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 TRAV2A0A0B4J234 112 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 FXYD1O00168 92 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 SDCBPO00560 298 aaPredicted RBP3.85□□□□□ -1.79
PVT1-205ENST00000517790 FFAR1O14842 300 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 IGLV2-14P01704 120 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 HLA-DRB4P13762 266 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 SMIM11AP58511 58 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 RPS11P62280 158 aaKnown RBP eCLIP3.85□□□□□ -1.79
PVT1-205ENST00000517790 KIAA0087Q14695 138 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 CENPWQ5EE01 88 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 SPATA12Q7Z6I5 190 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 TMEM256Q8N2U0 113 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 H1FXQ92522 213 aaKnown RBP3.85□□□□□ -1.79
PVT1-205ENST00000517790 C18orf15Q96N68 181 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 KRTAP4-5Q9BYR2 181 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 OCR1Q9BZK8 76 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 HIGD1BQ9P298 99 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 ARL2-SNX15V9GYD0 113 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 HLA-DRB4X5D2U9 266 aa3.85□□□□□ -1.79
PVT1-205ENST00000517790 GRIFINA4D1Z8 144 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 A6NDX4 124 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 IQCF6A8MYZ5 107 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 KLLNB2CW77 178 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 EPM2AB3EWF7 344 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 H3BP45 60 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 SRSF10O75494 262 aaKnown RBP3.84□□□□□ -1.79
PVT1-205ENST00000517790 PGLYRP1O75594 196 aaPredicted RBP3.84□□□□□ -1.79
PVT1-205ENST00000517790 IGKCP01834 107 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 HLA-DQA1P01909 254 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 S100A3P33764 101 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 ZNF138P52744 262 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 RPL18Q07020 188 aaKnown RBP3.84□□□□□ -1.79
PVT1-205ENST00000517790 LINC00173Q6ZV60 143 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 C6orf201Q7Z4U5 140 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 KTN1-AS1Q86SY8 53 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 LINC00337Q8N6G1 96 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 CSNK1G2-AS1Q8NCQ2 148 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 NTN5Q8WTR8 489 aaPredicted RBP3.84□□□□□ -1.79
PVT1-205ENST00000517790 CARD19Q96LW7 228 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 AMELYQ99218 206 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 HDHD3Q9BSH5 251 aaPredicted RBP3.84□□□□□ -1.79
PVT1-205ENST00000517790 CLEC7AQ9BXN2 247 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 DPM3Q9P2X0 92 aa3.84□□□□□ -1.79
PVT1-205ENST00000517790 TRAV8-3A0A0A6YYJ7 113 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 PIGBOS1A0A0B4J2F0 54 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 IGHV1-24A0A0C4DH33 117 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 RBAKDNA6NC62 111 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 SMIM1B2RUZ4 78 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 PRAC2D3DTV9 90 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 PAX4O43316 350 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 SYNGR2O43760 224 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 ASAH2BP0C7U1 165 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 IGHV3-43DP0DP04 118 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 CCL1P22362 96 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 COX7A1P24310 79 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 CSN1S1P47710 185 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 PCBD1P61457 104 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 FHL1Q13642 323 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 C6orf99Q4VX62 202 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 FAM222AQ5U5X8 452 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 CFAP126Q5VTH2 177 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 Q6ZS49 121 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 MKXQ8IYA7 352 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 CEND1Q8N111 149 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 LINC00311Q8N616 119 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 CMC2Q9NRP2 79 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 ZNF581Q9P0T4 197 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 RBM12B-AS1Q9P1G2 102 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 KAAG1Q9UBP8 84 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 SMAD5-AS1Q9Y6J3 95 aa3.83□□□□□ -1.8
PVT1-205ENST00000517790 ALMS1Q8TCU4 4167 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 LOC389332A0A1B0GUA5 103 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 UBE2L5PA0A1B0GUS4 154 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 ZNF20P17024 532 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 RSPO1Q2MKA7 263 aaPredicted RBP3.82□□□□□ -1.8
PVT1-205ENST00000517790 C12orf73Q69YU5 71 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 REG3GQ6UW15 175 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 SH2D6Q7Z4S9 175 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 ATP5L2Q7Z4Y8 100 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 ZNF329Q86UD4 541 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 RPP25LQ8N5L8 163 aaKnown RBP3.82□□□□□ -1.8
PVT1-205ENST00000517790 ZNF645Q8N7E2 425 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 TMEM190Q8WZ59 177 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 SMIM7Q9BQ49 75 aa3.82□□□□□ -1.8
PVT1-205ENST00000517790 TXNDC17Q9BRA2 123 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms